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MS001831 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001831
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:286025..286534
RNA-Seq ExpressionMS001831
SyntenyMS001831
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057761.1 hypothetical protein E6C27_scaffold274G00440 [Cucumis melo var. makuwa]3.0e-0735.89Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL------------------------------SSEDGNQ--Q
        ++E+ELIS L R G+      S WKIRTN+LA  + RRERRAA A+  +  R+LSY+D +                              SS+ G +  +
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL------------------------------SSEDGNQ--Q

Query:  QFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVHQQ
        Q PVCLNALSYS ASSSSSS++      Q  ++     KV      +V     E  +        + +A +A+A+  +V    +FSL CL F  H   +Q
Subjt:  QFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVHQQ

Query:  PPPFLLVPT
          PFLLVPT
Subjt:  PPPFLLVPT

KAG6589372.1 hypothetical protein SDJN03_14795, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1136.49Show/hide
Query:  EEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAA--AAAIAARKLSYEDL----------------------------LSSEDGNQ-------
        E++LIS L R G+AT S SSTWKIRTNELAQ E  RERRAA        R+LS++D+                            + S D +Q       
Subjt:  EEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAA--AAAIAARKLSYEDL----------------------------LSSEDGNQ-------

Query:  ------QQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSEEADDQIPCLPISIAIAIAIATASLVIILLIFSLCCLAFTPHAVH
              ++ PVCLN LSYSSASSSSSS++ S    Q  +++ V             E  ++       + +A  +A AS  +++LIFS  CL F   A  
Subjt:  ------QQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSEEADDQIPCLPISIAIAIAIATASLVIILLIFSLCCLAFTPHAVH

Query:  QQPPPFLLVPT
        ++  PFLLVPT
Subjt:  QQPPPFLLVPT

KGN63472.1 hypothetical protein Csa_014116 [Cucumis sativus]2.8e-0534.78Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-----------------------------SSEDGNQQQFP
        E++ ELIS L R  +     SS+WKIRTN+LA  E R ERRAA A+  + AR+LSY+D +                             SS+ G ++   
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-----------------------------SSEDGNQQQFP

Query:  VCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSE-----EADDQIPCLPISIAIAIA-IATASLVIILLIFSLCCLAFTPHAVHQQPP
        VCLNALSYS ASSSSSS     PL    + ++ +     + EN        + + +  C   +  + +A +A AS  + ++IFSL CL        ++  
Subjt:  VCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSE-----EADDQIPCLPISIAIAIA-IATASLVIILLIFSLCCLAFTPHAVHQQPP

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

TYJ98442.1 hypothetical protein E5676_scaffold350G00430 [Cucumis melo var. makuwa]6.1e-0836.02Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-------------------------------SSEDGNQ--
        ++E+ELIS L R G+      S WKIRTN+LA  + RRERRAA A+  +  R+LSY+D +                               SS+ G +  
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-------------------------------SSEDGNQ--

Query:  QQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ-----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVH
        +Q PVCLNALSYS ASSSSSS++S   +    K++     KV      +V     E  +        + +A +A+A+  +V    +FSL CL F  H   
Subjt:  QQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ-----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVH

Query:  QQPPPFLLVPT
        +Q  PFLLVPT
Subjt:  QQPPPFLLVPT

XP_022134742.1 uncharacterized protein LOC111006938 [Momordica charantia]6.9e-4489.57Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ
        EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ

Query:  KVLTPPPPLVENTSE
        K +  P   +E +++
Subjt:  KVLTPPPPLVENTSE

TrEMBL top hitse value%identityAlignment
A0A0A0LRR5 Uncharacterized protein1.4e-0534.78Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-----------------------------SSEDGNQQQFP
        E++ ELIS L R  +     SS+WKIRTN+LA  E R ERRAA A+  + AR+LSY+D +                             SS+ G ++   
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-----------------------------SSEDGNQQQFP

Query:  VCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSE-----EADDQIPCLPISIAIAIA-IATASLVIILLIFSLCCLAFTPHAVHQQPP
        VCLNALSYS ASSSSSS     PL    + ++ +     + EN        + + +  C   +  + +A +A AS  + ++IFSL CL        ++  
Subjt:  VCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSE-----EADDQIPCLPISIAIAIA-IATASLVIILLIFSLCCLAFTPHAVHQQPP

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

A0A5A7UWC4 Uncharacterized protein1.5e-0735.89Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL------------------------------SSEDGNQ--Q
        ++E+ELIS L R G+      S WKIRTN+LA  + RRERRAA A+  +  R+LSY+D +                              SS+ G +  +
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL------------------------------SSEDGNQ--Q

Query:  QFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVHQQ
        Q PVCLNALSYS ASSSSSS++      Q  ++     KV      +V     E  +        + +A +A+A+  +V    +FSL CL F  H   +Q
Subjt:  QFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVHQQ

Query:  PPPFLLVPT
          PFLLVPT
Subjt:  PPPFLLVPT

A0A5D3BFC1 Uncharacterized protein3.0e-0836.02Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-------------------------------SSEDGNQ--
        ++E+ELIS L R G+      S WKIRTN+LA  + RRERRAA A+  +  R+LSY+D +                               SS+ G +  
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL-------------------------------SSEDGNQ--

Query:  QQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ-----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVH
        +Q PVCLNALSYS ASSSSSS++S   +    K++     KV      +V     E  +        + +A +A+A+  +V    +FSL CL F  H   
Subjt:  QQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ-----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVIILLIFSLCCLAFTPHAVH

Query:  QQPPPFLLVPT
        +Q  PFLLVPT
Subjt:  QQPPPFLLVPT

A0A6J1C0G4 uncharacterized protein LOC1110069383.3e-4489.57Show/hide
Query:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ
        EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ
Subjt:  EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQ

Query:  KVLTPPPPLVENTSE
        K +  P   +E +++
Subjt:  KVLTPPPPLVENTSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCG
AAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACG
CTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTT
GAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTC
GCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT
mRNA sequenceShow/hide mRNA sequence
GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCG
AAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACG
CTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTT
GAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTC
GCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT
Protein sequenceShow/hide protein sequence
EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLV
ENTSEEADDQIPCLPISIAIAIAIATASLVIILLIFSLCCLAFTPHAVHQQPPPFLLVPT