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MS001834 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001834
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationscaffold30:300557..300763
RNA-Seq ExpressionMS001834
SyntenyMS001834
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7833994.1 putative transmembrane protein [Senna tora]4.5e-2692.75Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQIPGRGKVVEFG+MHTSGA+ILVHA+I+FGLITIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

XP_007225875.1 uncharacterized protein LOC18790196 [Prunus persica]6.5e-2588.41Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQ+PGRG+VVEFGSMHTSG +ILVH +IFFGL+TIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

XP_022134841.1 uncharacterized protein LOC111007014 [Momordica charantia]1.1e-27100Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

XP_028771934.1 uncharacterized protein LOC114729134 isoform X1 [Prosopis alba]2.2e-2588.41Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQ+PGRG++VEFGSMHTSG +ILVHA++FFGLITIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

XP_028771935.1 uncharacterized protein LOC114729134 isoform X2 [Prosopis alba]2.2e-2588.41Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQ+PGRG++VEFGSMHTSG +ILVHA++FFGLITIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

TrEMBL top hitse value%identityAlignment
A0A314UVR7 Uncharacterized protein4.1e-2586.96Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQ+PGRG+VVEFGSMHTSG +ILVH +IFFGL+TIFLIA+GVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

A0A4P1R3A0 Uncharacterized protein4.1e-2589.86Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQIPGRG+VVEFG+M TSGA+ILVHA+I+FGLITIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

A0A6J1BYW8 uncharacterized protein LOC1110070145.2e-28100Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

A0A6J5VQ87 Uncharacterized protein3.1e-2588.41Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQ+PGRG+VVEFGSMHTSG +ILVH +IFFGL+TIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

M5XMC9 Uncharacterized protein3.1e-2588.41Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVVIAVVLFVLL+PGLLFQ+PGRG+VVEFGSMHTSG +ILVH +IFFGL+TIFLIAIGVHIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)1.7e-1865.15Show/hide
Query:  ADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIY
        ADWGPV +AVVLFV+L+PGLLFQ+P R +V+E G+M TSG +ILVHA++FF +ITI +IAI +HI+
Subjt:  ADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIY

AT3G48660.1 Protein of unknown function (DUF 3339)2.2e-2682.61Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPVV+AV+LFVLLTPGLLFQIP RG+VVEFG+M TSGA+ILVH +IFFGLITIF IAI +HIYTG
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

AT5G08391.1 Protein of unknown function (DUF 3339)1.5e-1956.52Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        M+DWGPV++ V+LFV+LTPGLLFQ+PGR K VEFG+  TS  +++VH++++F L+ +FL+A+ +HIY G
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG

AT5G40980.1 Protein of unknown function (DUF 3339)4.3e-1963.64Show/hide
Query:  ADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIY
        ADWGPV++AV LF+LL+PGLLFQ+P R +V+EFG+M TSG +ILVHA+I+F ++TI +IAI +HI+
Subjt:  ADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIY

AT5G63500.1 Protein of unknown function (DUF 3339)4.1e-2579.71Show/hide
Query:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG
        MADWGPV+IAV+LFV+L+PGLLFQIP  G+VVEFG+M TSGA+ILVHA+IFFGLITIF IAI VHIY+G
Subjt:  MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATTGGGGGCCGGTTGTGATAGCGGTGGTGCTGTTCGTGCTGCTCACCCCAGGGCTGCTGTTTCAGATCCCAGGCAGAGGCAAGGTGGTGGAGTTCGGGAGCAT
GCATACCAGCGGAGCTGCCATTTTAGTCCACGCCGTCATCTTCTTCGGCCTCATCACCATCTTCCTCATCGCCATCGGCGTTCACATCTACACCGGC
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATTGGGGGCCGGTTGTGATAGCGGTGGTGCTGTTCGTGCTGCTCACCCCAGGGCTGCTGTTTCAGATCCCAGGCAGAGGCAAGGTGGTGGAGTTCGGGAGCAT
GCATACCAGCGGAGCTGCCATTTTAGTCCACGCCGTCATCTTCTTCGGCCTCATCACCATCTTCCTCATCGCCATCGGCGTTCACATCTACACCGGC
Protein sequenceShow/hide protein sequence
MADWGPVVIAVVLFVLLTPGLLFQIPGRGKVVEFGSMHTSGAAILVHAVIFFGLITIFLIAIGVHIYTG