; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001841 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001841
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationscaffold30:325898..326557
RNA-Seq ExpressionMS001841
SyntenyMS001841
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057769.1 nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa]7.9e-11798.64Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQR
        EDGSYASG SSGQGNLDGQR
Subjt:  EDGSYASGGSSGQGNLDGQR

XP_004138046.1 nuclear transcription factor Y subunit C-1 [Cucumis sativus]3.0e-11698.63Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASG SSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

XP_008464428.1 PREDICTED: nuclear transcription factor Y subunit C-1 [Cucumis melo]3.0e-11698.63Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASG SSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

XP_022134838.1 nuclear transcription factor Y subunit C-1-like [Momordica charantia]1.2e-117100Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASGGSSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

XP_038878995.1 nuclear transcription factor Y subunit C-1 [Benincasa hispida]1.8e-11698.63Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQ QSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASGGSSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNK7 CBFD_NFYB_HMF domain-containing protein1.5e-11698.63Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASG SSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

A0A1S3CLW7 nuclear transcription factor Y subunit C-11.5e-11698.63Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASG SSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

A0A5D3BF73 Nuclear transcription factor Y subunit C-13.8e-11798.64Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQR
        EDGSYASG SSGQGNLDGQR
Subjt:  EDGSYASGGSSGQGNLDGQR

A0A6J1C352 nuclear transcription factor Y subunit C-1-like5.9e-118100Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASGGSSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

A0A6J1JJG4 nuclear transcription factor Y subunit C-15.5e-11698.63Show/hide
Query:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MESNNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDPTGVYAQPPSQAWQSVWQ AA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASGGSSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

SwissProt top hitse value%identityAlignment
A6BLW4 Nuclear transcription factor Y subunit C-21.3e-5861.99Show/hide
Query:  PYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRR
        P  P     PA P HHLLQQQQ QLQ FW++QRQE E+   +DFKNHQLPLARIKKIMKADEDVRMISAEAP+LFAKACELFILELTIRSWLHAEENKRR
Subjt:  PYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRR

Query:  TLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQ
        TLQ+ND+AAAI RTD+FDFLVDIVPR+E K+E G       GG  GA      A+G+PYYYPPMGQPA       +  PA DP          AWQ   Q
Subjt:  TLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQ

Query:  TAAEDGSYASGGSSGQGNLDG
         AA D    + GS  +    G
Subjt:  TAAEDGSYASGGSSGQGNLDG

Q8LCG7 Nuclear transcription factor Y subunit C-23.2e-5275.18Show/hide
Query:  HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDI
        HH  QQQQQQLQMFW+ Q QEIE   DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R+W+H EENKRRTLQKNDIAAAI+RTD+
Subjt:  HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDI

Query:  FDFLVDIVPRDEIKDEAGLG---GMVGATASGVPYYY
        FDFLVDI+PRDE+K+E GLG   G + +     PYYY
Subjt:  FDFLVDIVPRDEIKDEAGLG---GMVGATASGVPYYY

Q9FMV5 Nuclear transcription factor Y subunit C-42.7e-9176.33Show/hide
Query:  SNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
        +NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
Subjt:  SNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF

Query:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA
        AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRPA
Subjt:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA

Query:  MDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ
        MDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG GNLD Q
Subjt:  MDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ

Q9SMP0 Nuclear transcription factor Y subunit C-11.5e-9481.62Show/hide
Query:  MESNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
        M++NNQ     A   P PPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
Subjt:  MESNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI

Query:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP
        LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG PGGMMIGRPAMDP GVY QPP
Subjt:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP

Query:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ
        SQAWQSVWQT+    +D SY SGGSSGQGNLDGQ
Subjt:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ

Q9ZVL3 Nuclear transcription factor Y subunit C-34.9e-5365.17Show/hide
Query:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA
        P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Subjt:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA

Query:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ
        A+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Subjt:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ

Arabidopsis top hitse value%identityAlignment
AT1G54830.1 nuclear factor Y, subunit C33.5e-5465.17Show/hide
Query:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA
        P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Subjt:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA

Query:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ
        A+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Subjt:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ

AT1G54830.2 nuclear factor Y, subunit C33.5e-5465.17Show/hide
Query:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA
        P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Subjt:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA

Query:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ
        A+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Subjt:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ

AT3G48590.1 nuclear factor Y, subunit C11.1e-9581.62Show/hide
Query:  MESNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
        M++NNQ     A   P PPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
Subjt:  MESNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI

Query:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP
        LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG PGGMMIGRPAMDP GVY QPP
Subjt:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP

Query:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ
        SQAWQSVWQT+    +D SY SGGSSGQGNLDGQ
Subjt:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ

AT5G63470.1 nuclear factor Y, subunit C41.9e-9276.33Show/hide
Query:  SNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
        +NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
Subjt:  SNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF

Query:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA
        AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRPA
Subjt:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA

Query:  MDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ
        MDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG GNLD Q
Subjt:  MDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ

AT5G63470.2 nuclear factor Y, subunit C41.9e-9276.33Show/hide
Query:  SNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
        +NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
Subjt:  SNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF

Query:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA
        AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRPA
Subjt:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA

Query:  MDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ
        MDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG GNLD Q
Subjt:  MDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAACAATCAAGCCCAATCCTCCCCTTACCCTCCTCCCCAGGCCCCCGTCCCGGCCCCTCCCTTCCACCACCTCCTCCAGCAGCAGCAGCAGCAGCTCCAGAT
GTTCTGGTCCTTTCAGCGCCAAGAAATAGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTTTGGCCCGCATTAAGAAGATTATGAAAGCCGATGAGGACGTCCGCA
TGATCTCCGCCGAGGCTCCCATTTTGTTCGCCAAGGCATGCGAGCTTTTCATTCTTGAACTCACTATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTG
CAGAAGAACGATATAGCAGCCGCCATTACGAGGACCGATATCTTTGATTTCTTAGTCGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGGCTTGGGAGGCATGGT
CGGAGCCACTGCTAGCGGAGTGCCCTACTATTATCCGCCTATGGGCCAACCGGCCGGAGCTCCGGGGGGGATGATGATTGGGAGACCGGCCATGGATCCCACCGGAGTTT
ATGCGCAGCCGCCGTCACAGGCCTGGCAATCGGTGTGGCAGACCGCGGCGGAGGACGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGCCAGAGG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAACAATCAAGCCCAATCCTCCCCTTACCCTCCTCCCCAGGCCCCCGTCCCGGCCCCTCCCTTCCACCACCTCCTCCAGCAGCAGCAGCAGCAGCTCCAGAT
GTTCTGGTCCTTTCAGCGCCAAGAAATAGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTTTGGCCCGCATTAAGAAGATTATGAAAGCCGATGAGGACGTCCGCA
TGATCTCCGCCGAGGCTCCCATTTTGTTCGCCAAGGCATGCGAGCTTTTCATTCTTGAACTCACTATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTG
CAGAAGAACGATATAGCAGCCGCCATTACGAGGACCGATATCTTTGATTTCTTAGTCGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGGCTTGGGAGGCATGGT
CGGAGCCACTGCTAGCGGAGTGCCCTACTATTATCCGCCTATGGGCCAACCGGCCGGAGCTCCGGGGGGGATGATGATTGGGAGACCGGCCATGGATCCCACCGGAGTTT
ATGCGCAGCCGCCGTCACAGGCCTGGCAATCGGTGTGGCAGACCGCGGCGGAGGACGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGCCAGAGG
Protein sequenceShow/hide protein sequence
MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTL
QKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQR