CuGenDBv2

Gene ID	MS001842
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein transport protein Sec61 subunit gamma-like
Genome location	scaffold30:333278..333603
RNA-Seq Expression	MS001842
Synteny	MS001842
Gene Ontology terms	GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0071261 - Ssh1 translocon complex (cellular component) GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domains	IPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit IPR008158 - Protein translocase SEC61 complex, gamma subunit IPR023391 - Protein translocase SecE domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

RWR80044.1 protein transport protein Sec61 subunit gamma-like protein [Cinnamomum micranthum f. kanehirae]

2.4e-25

85.33

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLRGFAKDS RLVKRCHKPDR+      +FTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

VAI56164.1 unnamed protein product [Triticum turgidum subsp. durum]

1.4e-25

83.12

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQ--GMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLR FAKDSVRLVKRCHKPDR+  G+    +FTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQ--GMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

VAI92799.1 unnamed protein product [Triticum turgidum subsp. durum]

5.4e-25

84.62

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLH---QFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLR FAKDSVRLVKRCHKPDR+G F L    +FTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLH---QFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_008782072.1 uncharacterized protein LOC103701688 [Phoenix dactylifera]

2.4e-25

85.33

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLRGFAKDSVRLVKRCHKPDR+      +FTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_022134627.1 protein transport protein Sec61 subunit gamma-like [Momordica charantia]

1.3e-26

90.67

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQ      +FTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A9J3J3 Sec61 gamma subunit, putative

1.5e-25

85.33

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLRGFAKDSVRLVKRCHKPD +      +FTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A3S5WGK6 Protein transport protein Sec61 subunit gamma-like protein

1.2e-25

85.33

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLRGFAKDS RLVKRCHKPDR+      +FTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A446W7V8 Uncharacterized protein

6.9e-26

83.12

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQ--GMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLR FAKDSVRLVKRCHKPDR+  G+    +FTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQ--GMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A446YWH6 Uncharacterized protein

2.6e-25

84.62

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLH---QFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLR FAKDSVRLVKRCHKPDR+G F L    +FTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLH---QFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1C046 protein transport protein Sec61 subunit gamma-like

6.2e-27

90.67

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQ      +FTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

SwissProt top hits

e value

%identity

Alignment

P0DI74 Protein transport protein Sec61 subunit gamma-1

1.3e-26

82.43

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV+DPLR FAKDS+RLVKRCHKPDR+      +FTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-2

1.3e-26

82.43

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV+DPLR FAKDS+RLVKRCHKPDR+      +FTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma

2.7e-27

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSV+DPLR FAKDSVRLVKRCHKPDR+      +FTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma

1.0e-18

64.86

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MD +   I+P R FAKDS+RLVKRC KPDR+      +F K+A+ TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-3

5.6e-25

79.73

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS IDPLR FAK SVRLV+RCHKPDR+      +FTKVA+RTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hits

e value

%identity

Alignment

AT3G48570.1 secE/sec61-gamma protein transport protein

4.0e-26

79.73

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS IDPLR FAK SVRLV+RCHKPDR+      +FTKVA+RTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein

9.5e-28

82.43

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV+DPLR FAKDS+RLVKRCHKPDR+      +FTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein

9.5e-28

82.43

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Query:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSV+DPLR FAKDS+RLVKRCHKPDR+      +FTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Sequences

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CDS sequence

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ATGGATGCCATTGATTCAGTCATCGATCCTCTCAGAGGCTTCGCCAAGGATAGCGTCCGTCTCGTCAAGAGATGCCACAAGCCTGATCGCCAAGGCATGTTTTACCTTCA
CCAATTCACCAAAGTGGCGCTCCGTACCGCAATTGGTTTCGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATTTTCATTCCGATTAACAATATCATCGTTGGAT
CTGGA

mRNA sequence

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Protein sequence

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MDAIDSVIDPLRGFAKDSVRLVKRCHKPDRQGMFYLHQFTKVALRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

MS001842 (gene) of Bitter gourd (TR) v1 genome