; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001845 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001845
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMYND-type domain-containing protein
Genome locationscaffold30:353659..354903
RNA-Seq ExpressionMS001845
SyntenyMS001845
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR002893 - Zinc finger, MYND-type
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR036047 - F-box-like domain superfamily
IPR044508 - F-box protein At5g50450/At1g67340-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589385.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-16384.26Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+   WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRPHEFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE
        YCSRGCQAQDWK+RHK +C  +++W++ E +N  GG+F  VEE
Subjt:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE

KAG7023063.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma]2.3e-16384.26Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+   WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRPHEFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE
        YCSRGCQAQDWK+RHK +C  +++W++ E +N  GG+F  VEE
Subjt:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE

XP_008464430.1 PREDICTED: F-box protein At1g67340-like [Cucumis melo]3.1e-16082.22Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI  KRPRT R   ADSDLFDVLPDDLLIHLL  LA+SASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+  NWC+S+HRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLL+QAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV
        AREL++VL+SSS + QQ+ H   G L DLTA T C LLSDFGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRPHEFRRCSVCGTV
Subjt:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV

Query:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE
        NYCSRGCQAQDWK+RHK +C  +++WR+E  N+ G +F +VEE
Subjt:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE

XP_022921747.1 F-box protein At1g67340-like [Cucurbita moschata]2.3e-16384.55Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLN LLTCKRLNRL LHPLVLSKAGPKAFAV+   WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRPHEFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE
        YCSRGCQAQDWK+RHK +C  +++W++ E +N  GG+F  VEE
Subjt:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE

XP_023516460.1 F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]6.0e-16484.55Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+   WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRPHEFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE
        YCSRGCQAQDWK+RHK +C  +++W++ E +N  GG+F  VEE
Subjt:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE

TrEMBL top hitse value%identityAlignment
A0A1S3CLL0 F-box protein At1g67340-like1.5e-16082.22Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI  KRPRT R   ADSDLFDVLPDDLLIHLL  LA+SASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+  NWC+S+HRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLL+QAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV
        AREL++VL+SSS + QQ+ H   G L DLTA T C LLSDFGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRPHEFRRCSVCGTV
Subjt:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV

Query:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE
        NYCSRGCQAQDWK+RHK +C  +++WR+E  N+ G +F +VEE
Subjt:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE

A0A5A7UPI5 F-box protein2.5e-16082.22Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI  KRPRT R   ADSDLFDVLPDDLLIHLL RLA+SASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+  NWC+S+HRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLL+QAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV
        AREL++VL+SSS + QQ+ H   G L DLTA T C LLSDFGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRPHEFRRCSVCGTV
Subjt:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV

Query:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE
        NYCSRGCQAQDWK+RHK +C  +++WR+E  N+   +F +VEE
Subjt:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE

A0A5D3BGS7 F-box protein1.5e-16082.22Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI  KRPRT R   ADSDLFDVLPDDLLIHLL  LA+SASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+  NWC+S+HRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLL+QAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV
        AREL++VL+SSS + QQ+ H   G L DLTA T C LLSDFGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRPHEFRRCSVCGTV
Subjt:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTV

Query:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE
        NYCSRGCQAQDWK+RHK +C  +++WR+E  N+ G +F +VEE
Subjt:  NYCSRGCQAQDWKLRHKVDCRPIEQWRNEAENDPGGVFAMVEE

A0A6J1E1B7 F-box protein At1g67340-like1.1e-16384.55Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLN LLTCKRLNRL LHPLVLSKAGPKAFAV+   WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRPHEFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE
        YCSRGCQAQDWK+RHK +C  +++W++ E +N  GG+F  VEE
Subjt:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE

A0A6J1JFU9 F-box protein At1g67340-like1.9e-16082.8Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS
        M  +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+   WC+SAHRFLKRC +AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCL NRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER    R GLRLCSH GCGRPETRPHEFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE
        YCSRGCQ+QDWK+RHK +C  +++W++ E +N  G +F  VEE
Subjt:  YCSRGCQAQDWKLRHKVDCRPIEQWRN-EAENDPGGVFAMVEE

SwissProt top hitse value%identityAlignment
Q09415 SET domain-containing protein 142.6e-0545.28Show/hide
Query:  CGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCRPIEQWRNEAEND
        C +  T   E ++CS C  + YCS+ CQ  DWKL HKV+C+ I+   NE  ND
Subjt:  CGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCRPIEQWRNEAEND

Q9FK27 F-box protein At5g504509.4e-11266.45Show/hide
Query:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS
        F+ L DDL+I +LR+LA+SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV    W +S+H+FLK CV AGN +ASY+LGMIRFYCL+N  SGAS
Subjt:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS

Query:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH
        LMAKAAIKSHAPALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQANAREL+  L S   +     
Subjt:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH

Query:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCRP
        +  L DL+              +P  E HPVN FL+EWF + R  +A +GLR+CSH GCGRPETR HEFRRCSVCG VNYCSRGCQA DW+ +HKV+C P
Subjt:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCRP

Query:  IEQW
        ++ W
Subjt:  IEQW

Q9FYF9 F-box protein At1g673401.8e-12366.25Show/hide
Query:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS
        +DL D +PDDL+I +L +L S++  P+D +N+LLTCKRL  LA++P+VLS+  PKA AVK  NW E +HRFLKRCV+AG+ EA YTLGMIRFYCL+NRG+
Subjt:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS

Query:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S
        GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L+QANAREL++VL S     S
Subjt:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S

Query:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKL
        + +   +    ++      +C LLSDFGCN+PAPE HP N FL +WF          GLRLCSHAGCGRPETR HEFRRCSVCG VNYCSR CQA DWKL
Subjt:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKL

Query:  RHKVDCRPIEQWRNEAENDPGGV
        RHK+DC P+++W  E +   G V
Subjt:  RHKVDCRPIEQWRNEAENDPGGV

Arabidopsis top hitse value%identityAlignment
AT1G17110.1 ubiquitin-specific protease 152.3e-0443.59Show/hide
Query:  RCSVCGTVNYCSRGCQAQDWKLRHKVDCRPIEQWRNEAE
        RCS C +V YCS  CQ   W++ HK +C P+E   + +E
Subjt:  RCSVCGTVNYCSRGCQAQDWKLRHKVDCRPIEQWRNEAE

AT1G17110.2 ubiquitin-specific protease 152.3e-0443.59Show/hide
Query:  RCSVCGTVNYCSRGCQAQDWKLRHKVDCRPIEQWRNEAE
        RCS C +V YCS  CQ   W++ HK +C P+E   + +E
Subjt:  RCSVCGTVNYCSRGCQAQDWKLRHKVDCRPIEQWRNEAE

AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger1.3e-12466.25Show/hide
Query:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS
        +DL D +PDDL+I +L +L S++  P+D +N+LLTCKRL  LA++P+VLS+  PKA AVK  NW E +HRFLKRCV+AG+ EA YTLGMIRFYCL+NRG+
Subjt:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS

Query:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S
        GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L+QANAREL++VL S     S
Subjt:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S

Query:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKL
        + +   +    ++      +C LLSDFGCN+PAPE HP N FL +WF          GLRLCSHAGCGRPETR HEFRRCSVCG VNYCSR CQA DWKL
Subjt:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKL

Query:  RHKVDCRPIEQWRNEAENDPGGV
        RHK+DC P+++W  E +   G V
Subjt:  RHKVDCRPIEQWRNEAENDPGGV

AT2G24640.1 ubiquitin-specific protease 191.0e-0443.9Show/hide
Query:  CGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCR
        CG+  T     ++CS C +V YCS  CQ  DWK  HK+ C+
Subjt:  CGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCR

AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger6.7e-11366.45Show/hide
Query:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS
        F+ L DDL+I +LR+LA+SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV    W +S+H+FLK CV AGN +ASY+LGMIRFYCL+N  SGAS
Subjt:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS

Query:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH
        LMAKAAIKSHAPALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQANAREL+  L S   +     
Subjt:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH

Query:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCRP
        +  L DL+              +P  E HPVN FL+EWF + R  +A +GLR+CSH GCGRPETR HEFRRCSVCG VNYCSRGCQA DW+ +HKV+C P
Subjt:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCRP

Query:  IEQW
        ++ W
Subjt:  IEQW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCTCCAAGAGGCCAAGAACATGCCGGAAACCCGCCGCAGATTCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTAATTCACCTCCTCCGCCGCCTCGCCTC
CTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTTCTGTTAACATGCAAGAGGTTGAATCGCTTGGCTCTTCATCCTTTGGTGTTGTCTAAAGCCGGACCGAAAGCGTTTG
CAGTTAAAACCGGAAACTGGTGCGAGTCCGCTCACCGATTCCTCAAACGCTGCGTTGAAGCCGGCAACTCCGAAGCAAGTTACACGCTCGGAATGATCCGATTTTATTGC
TTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCAGCCATCAAATCTCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGCGGCTC
TAAGAGCGACAAGGACCTCCAGGCCGGAGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCGCTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACG
GCGTGCGCCGAAACACCGACGAAGGCCGCCGCCTGCTGATCCAAGCCAACGCCCGTGAGCTTTCTTCCGTCCTAATCTCCTCCTCCAGGGTATGCCAGCAGCGCCACCAC
GGCGGCCTTCTCGATTTGACAGCCAGTACAAGTTGTTTGTTGCTGAGTGATTTCGGCTGTAACATTCCGGCGCCGGAGCCACATCCGGTGAACTTGTTTTTGAGAGAGTG
GTTTGAGACGGAACGTCGAGCGATGGCGCGTCAGGGGCTGAGACTCTGCTCGCACGCCGGATGCGGCCGGCCGGAGACTCGACCGCACGAGTTCCGACGGTGCTCGGTCT
GCGGCACGGTGAATTATTGTTCTCGAGGATGCCAGGCGCAGGATTGGAAACTCCGCCATAAGGTGGACTGCAGACCAATTGAGCAGTGGCGAAATGAGGCTGAGAACGAT
CCCGGCGGCGTATTTGCTATGGTAGAAGAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCTCCAAGAGGCCAAGAACATGCCGGAAACCCGCCGCAGATTCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTAATTCACCTCCTCCGCCGCCTCGCCTC
CTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTTCTGTTAACATGCAAGAGGTTGAATCGCTTGGCTCTTCATCCTTTGGTGTTGTCTAAAGCCGGACCGAAAGCGTTTG
CAGTTAAAACCGGAAACTGGTGCGAGTCCGCTCACCGATTCCTCAAACGCTGCGTTGAAGCCGGCAACTCCGAAGCAAGTTACACGCTCGGAATGATCCGATTTTATTGC
TTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCAGCCATCAAATCTCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGCGGCTC
TAAGAGCGACAAGGACCTCCAGGCCGGAGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCGCTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACG
GCGTGCGCCGAAACACCGACGAAGGCCGCCGCCTGCTGATCCAAGCCAACGCCCGTGAGCTTTCTTCCGTCCTAATCTCCTCCTCCAGGGTATGCCAGCAGCGCCACCAC
GGCGGCCTTCTCGATTTGACAGCCAGTACAAGTTGTTTGTTGCTGAGTGATTTCGGCTGTAACATTCCGGCGCCGGAGCCACATCCGGTGAACTTGTTTTTGAGAGAGTG
GTTTGAGACGGAACGTCGAGCGATGGCGCGTCAGGGGCTGAGACTCTGCTCGCACGCCGGATGCGGCCGGCCGGAGACTCGACCGCACGAGTTCCGACGGTGCTCGGTCT
GCGGCACGGTGAATTATTGTTCTCGAGGATGCCAGGCGCAGGATTGGAAACTCCGCCATAAGGTGGACTGCAGACCAATTGAGCAGTGGCGAAATGAGGCTGAGAACGAT
CCCGGCGGCGTATTTGCTATGGTAGAAGAG
Protein sequenceShow/hide protein sequence
MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTGNWCESAHRFLKRCVEAGNSEASYTLGMIRFYC
LRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH
GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPHEFRRCSVCGTVNYCSRGCQAQDWKLRHKVDCRPIEQWRNEAEND
PGGVFAMVEE