; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001855 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001855
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEF hand calcium-binding family protein
Genome locationscaffold30:408207..408608
RNA-Seq ExpressionMS001855
SyntenyMS001855
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021401.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5987.22Show/hide
Query:  FERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG
        ++RVL YFDEDGDGKISPSELRNRLGL+GGELLPAEAE+AVESLDSDGDGLLCVGD+ RLLDVGE+EKLKDL+EAF +YDAEGCGFITPK LKRML+KLG
Subjt:  FERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG

Query:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        E KST ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

XP_008464450.1 PREDICTED: putative calcium-binding protein CML19 [Cucumis melo]1.6e-5986.57Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
        +++RVLSYFDEDGDGKISPSELRNRLGL+GGELL AEAE AVESLDSDGDGLLC GD+ RLL+VGE+EKLKDLKEAFA+YD+EGCGFITPK LK+MLRKL
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL

Query:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        GERKST+ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

XP_022134910.1 putative calcium-binding protein CML19 [Momordica charantia]4.9e-69100Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
        KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL

Query:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
Subjt:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

XP_022925940.1 putative calcium-binding protein CML19 [Cucurbita moschata]2.1e-5987.22Show/hide
Query:  FERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG
        ++RVL YFDEDGDGKISPSELRNRLGL+GGELLPAEAE AVESLDSDGDGLLCVGD+ RLLDVGE+EKLKDL+EAF +YDAEGCGFITPK LKRML+KLG
Subjt:  FERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG

Query:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        E KST ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

XP_038879778.1 putative calcium-binding protein CML19 [Benincasa hispida]1.2e-5987.31Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
        +++RVLSYFDEDGDGKISPSELRNRLGLMGGELL AEAE AVESLDSDGDGLLC GD  RLL+VGE+EKLKDLKEAFA+YD EGCGFITPK LK+MLRKL
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL

Query:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        GERKST+ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

TrEMBL top hitse value%identityAlignment
A0A0A0LU40 Uncharacterized protein1.3e-5986.57Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
        +++RVLSYFDEDGDGKISPSELRNRLGL+GGEL  AEAE AVESLDSDGDGLLCVGD+ RLL+VGE+EKLKDLKEAFA+YD+EGCGFITPK LK+MLRKL
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL

Query:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        GERKST+ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

A0A1S3CN12 putative calcium-binding protein CML197.6e-6086.57Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
        +++RVLSYFDEDGDGKISPSELRNRLGL+GGELL AEAE AVESLDSDGDGLLC GD+ RLL+VGE+EKLKDLKEAFA+YD+EGCGFITPK LK+MLRKL
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL

Query:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        GERKST+ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

A0A5A7URJ2 Putative calcium-binding protein CML197.6e-6086.57Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
        +++RVLSYFDEDGDGKISPSELRNRLGL+GGELL AEAE AVESLDSDGDGLLC GD+ RLL+VGE+EKLKDLKEAFA+YD+EGCGFITPK LK+MLRKL
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL

Query:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        GERKST+ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

A0A6J1BZN1 putative calcium-binding protein CML192.4e-69100Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
        KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKL

Query:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
Subjt:  GERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

A0A6J1EJM6 putative calcium-binding protein CML191.0e-5987.22Show/hide
Query:  FERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG
        ++RVL YFDEDGDGKISPSELRNRLGL+GGELLPAEAE AVESLDSDGDGLLCVGD+ RLLDVGE+EKLKDL+EAF +YDAEGCGFITPK LKRML+KLG
Subjt:  FERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG

Query:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMMA
        E KST ECK MI RFDLNGDGLISFEEFQIMMA
Subjt:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMMA

SwissProt top hitse value%identityAlignment
Q8RYJ8 Putative calcium-binding protein CML193.6e-3052.9Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRL-GLMGGELLPAEAELAVESLDSDGDGLLCVGDLARL---LDVG-EDEKLKDLKEAFAMYDAEGCGFITPKGLKR
        +F RV S FD D DGKIS +ELR  +   +G ++   EAE  V S D+D DGLL   +  +L   L++G E+E+ + L EAF MY+ EG G ITP  LKR
Subjt:  KFERVLSYFDEDGDGKISPSELRNRL-GLMGGELLPAEAELAVESLDSDGDGLLCVGDLARL---LDVG-EDEKLKDLKEAFAMYDAEGCGFITPKGLKR

Query:  MLRKLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        ML KLG  +  +EC+ MICRFDL+GDG+ISFEEF+IMM
Subjt:  MLRKLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

Q8RYJ9 Putative calcium-binding protein CML235.7e-2848.61Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESL-DSDGDGLLCVGDLARLL----------DVGEDEKLKDLKEAFAMYDAEGCGFIT
        +F RV   FD+DGDGKIS +ELR  +    GE +P E   A+ +L D+DGDGLL   +  RL+          +  +DE  + L+EAFAMY+ EG G IT
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESL-DSDGDGLLCVGDLARLL----------DVGEDEKLKDLKEAFAMYDAEGCGFIT

Query:  PKGLKRMLRKLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        P  LK ML KLG      EC+AMICRFD+NGDG+++F+EF+ MM
Subjt:  PKGLKRMLRKLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

Q8RYK0 Probable calcium-binding protein CML312.3e-2951.91Show/hide
Query:  FDEDGDGKISPSELRNRL-GLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKD-----LKEAFAMYDAEGCGFITPKGLKRMLRKLGE
        FD DGDG+IS +ELR  +   +G E+   EA   V S+D+DGDGLLC  +  RL+   E E+  +     L+EAF MY+ EG G ITP  L+RMLR+LG 
Subjt:  FDEDGDGKISPSELRNRL-GLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKD-----LKEAFAMYDAEGCGFITPKGLKRMLRKLGE

Query:  RKSTKECKAMICRFDLNGDGLISFEEFQIMM
         +   +C+AMICRFDLNGDG++SF+EF+IMM
Subjt:  RKSTKECKAMICRFDLNGDGLISFEEFQIMM

Q9SRE6 Calcium-binding protein CML381.3e-2747.76Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK
        + E V SY D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   + ++L+ V  E+EK  +LK AF +Y AEG   ITP+ LK ML+K
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK

Query:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        LGE ++T +C+ MI  FDLN DG++SF+EF +MM
Subjt:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

Q9SRE7 Calcium-binding protein CML395.3e-2645.93Show/hide
Query:  ERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLL----DVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLR
        E V +Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L + + A L+    +  E+EK + + EAF MY A+G   ITP  LK ML 
Subjt:  ERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLL----DVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLR

Query:  KLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        KLGE ++T +CK MI  FDLN DG++SF+EF +MM
Subjt:  KLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein3.8e-2745.93Show/hide
Query:  ERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLL----DVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLR
        E V +Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L + + A L+    +  E+EK + + EAF MY A+G   ITP  LK ML 
Subjt:  ERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLL----DVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLR

Query:  KLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        KLGE ++T +CK MI  FDLN DG++SF+EF +MM
Subjt:  KLGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

AT1G76650.1 calmodulin-like 389.0e-2947.76Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK
        + E V SY D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   + ++L+ V  E+EK  +LK AF +Y AEG   ITP+ LK ML+K
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK

Query:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        LGE ++T +C+ MI  FDLN DG++SF+EF +MM
Subjt:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

AT1G76650.2 calmodulin-like 385.5e-2645.52Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK
        + E V SY D + DG+ISP EL+     +G +LL           D+DGDG+L   + ++L+ V  E+EK  +LK AF +Y AEG   ITP+ LK ML+K
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK

Query:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        LGE ++T +C+ MI  FDLN DG++SF+EF +MM
Subjt:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

AT1G76650.3 calmodulin-like 389.0e-2947.76Show/hide
Query:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK
        + E V SY D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   + ++L+ V  E+EK  +LK AF +Y AEG   ITP+ LK ML+K
Subjt:  KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDV-GEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRK

Query:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        LGE ++T +C+ MI  FDLN DG++SF+EF +MM
Subjt:  LGERKSTKECKAMICRFDLNGDGLISFEEFQIMM

AT5G42380.1 calmodulin like 371.3e-2444.7Show/hide
Query:  VLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLL---DVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG
        V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +  +L+   D  ++E+ K+LKEAF MY  EG  FIT   L+R L +LG
Subjt:  VLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLL---DVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLG

Query:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMM
        E  +   CK MI  FD N DG++SF+EF +MM
Subjt:  ERKSTKECKAMICRFDLNGDGLISFEEFQIMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGTTCGAGCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGCTCGGGCTGATGGGCGGAGAGCTGTTGCCGGCGGA
GGCAGAGCTGGCGGTGGAATCGCTGGACTCCGACGGAGACGGATTGCTGTGCGTCGGCGATCTCGCACGGCTACTGGACGTCGGAGAGGACGAGAAATTAAAGGATCTGA
AAGAGGCTTTCGCGATGTACGATGCGGAAGGCTGCGGATTCATAACTCCCAAGGGATTGAAGAGAATGCTCAGAAAATTGGGGGAACGGAAATCCACGAAGGAGTGCAAA
GCCATGATTTGTCGCTTCGATTTGAACGGCGACGGTCTGATTAGCTTCGAGGAGTTTCAGATCATGATGGCC
mRNA sequenceShow/hide mRNA sequence
AAGTTCGAGCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGCTCGGGCTGATGGGCGGAGAGCTGTTGCCGGCGGA
GGCAGAGCTGGCGGTGGAATCGCTGGACTCCGACGGAGACGGATTGCTGTGCGTCGGCGATCTCGCACGGCTACTGGACGTCGGAGAGGACGAGAAATTAAAGGATCTGA
AAGAGGCTTTCGCGATGTACGATGCGGAAGGCTGCGGATTCATAACTCCCAAGGGATTGAAGAGAATGCTCAGAAAATTGGGGGAACGGAAATCCACGAAGGAGTGCAAA
GCCATGATTTGTCGCTTCGATTTGAACGGCGACGGTCTGATTAGCTTCGAGGAGTTTCAGATCATGATGGCC
Protein sequenceShow/hide protein sequence
KFERVLSYFDEDGDGKISPSELRNRLGLMGGELLPAEAELAVESLDSDGDGLLCVGDLARLLDVGEDEKLKDLKEAFAMYDAEGCGFITPKGLKRMLRKLGERKSTKECK
AMICRFDLNGDGLISFEEFQIMMA