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MS001883 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001883
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCentromere protein X
Genome locationscaffold30:597771..598011
RNA-Seq ExpressionMS001883
SyntenyMS001883
Gene Ontology termsGO:0000712 - resolution of meiotic recombination intermediates (biological process)
GO:0006281 - DNA repair (biological process)
GO:0031297 - replication fork processing (biological process)
GO:0051382 - kinetochore assembly (biological process)
GO:0043240 - Fanconi anaemia nuclear complex (cellular component)
GO:0071821 - FANCM-MHF complex (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589406.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1696.15Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKL+SKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_022135388.1 protein MHF2 homolog [Momordica charantia]1.9e-16100Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_022921828.1 protein MHF2 homolog [Cucurbita moschata]5.4e-1696.15Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKL+SKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_022987126.1 protein MHF2 homolog [Cucurbita maxima]2.4e-1698.08Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

XP_023516676.1 protein MHF2 homolog [Cucurbita pepo subsp. pepo]2.4e-1698.08Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein1.0e-1594.23Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLSSKL+QIFISEAVQRAATIAEAEGISRIE THLER+LPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A1S3CLK5 centromere protein X isoform X22.9e-1592.31Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLER+LPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A6J1C4N9 protein MHF2 homolog9.0e-17100Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A6J1E4X1 protein MHF2 homolog2.6e-1696.15Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKL+SKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

A0A6J1JD93 protein MHF2 homolog1.2e-1698.08Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

SwissProt top hitse value%identityAlignment
A8MT69 Centromere protein X1.7e-0445.1Show/hide
Query:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        + +AL+L  +LL++F+ EA  R    A+AE   R++   LE++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

P0DJH7 Centromere protein X6.2e-0749.02Show/hide
Query:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        N +AL L ++LL++F+ EA  RAA  A+AE + +++  H+E++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q2NKU0 Centromere protein X9.0e-0647.06Show/hide
Query:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        + +AL+L ++LL+IF+ EA  R+   A+AEG++ ++   LE++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q5RBU1 Centromere protein X1.7e-0445.1Show/hide
Query:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        + +AL+L  +LL++F+ EA  R    A+AE   R++   LE++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q8L7N3 Protein MHF2 homolog3.7e-1582.69Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLS +LL+ F+SEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein2.6e-1682.69Show/hide
Query:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        ANANALKLS +LL+ F+SEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

AT1G78790.2 unknown protein4.7e-1088.57Show/hide
Query:  SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        SEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCAATGCAAATGCACTTAAGTTGAGCTCTAAACTACTACAGATATTTATCTCAGAGGCTGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGA
AGCCACTCATTTGGAGAGAATTCTGCCACAGTTACTACTGGATTTT
mRNA sequenceShow/hide mRNA sequence
GCCAATGCAAATGCACTTAAGTTGAGCTCTAAACTACTACAGATATTTATCTCAGAGGCTGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGA
AGCCACTCATTTGGAGAGAATTCTGCCACAGTTACTACTGGATTTT
Protein sequenceShow/hide protein sequence
ANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF