CuGenDBv2

Gene ID	MS001892
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Golgin subfamily A member 6-like protein 2
Genome location	scaffold30:752717..753553
RNA-Seq Expression	MS001892
Synteny	MS001892
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138095.1 uncharacterized protein LOC101204691 [Cucumis sativus]

9.6e-88

83.73

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWKTEKK+LKEEVK+LRKKV E   +IEEG  GEKIATEWEM 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        G+ N IFEQIQQERARRDEAI+KWKQLYHAIK+ELDDLIQRTHNGDGL+WG  ER EALKT+LQAKEETIKALKE+VVSME +KY+R+REIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKEQQI
Subjt:  LTSKKEQQI

XP_008464528.1 PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo]

6.2e-87

82.3

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WKTEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        G+ N IFEQIQQERARRDEA++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSME +KY+R+REIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKEQQI
Subjt:  LTSKKEQQI

XP_022134638.1 uncharacterized protein PF11_0207-like [Momordica charantia]

5.4e-107

99.52

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMD+ETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        LTSKKEQQI
Subjt:  LTSKKEQQI

XP_023530768.1 uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo]

1.8e-86

82.78

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSK GS  CDDDV  LKEKIRLLREEVRGVMSEMDKE KAHEKDMV+FAFKEA WKTEKKKL+EEVK+LRKKV ERM +IEEG  GEK ATEWE+ 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
         + N IFEQIQQERARRDEAI+KWKQLYHAIK+ELDDLIQRTHNGDGLYWGA+ER EAL+TEL AKEETIKALKE+V SME EKY+RD EIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKE+QI
Subjt:  LTSKKEQQI

XP_038879675.1 uncharacterized protein LOC120071454 [Benincasa hispida]

3.9e-89

84.69

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSKDGSE  +D+V+ LKEKIRLLREEVRGVMS MDKETKAHEKDMVVFAFKEAGWKTEKK+LKEEVK+LRKKV E + +IEEG  GEKIATEWEM 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        G+ N IFEQIQQERARRDEAI+KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKTEL+AKEETIKALKE+VVSME EKY+R+REIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKEQQI
Subjt:  LTSKKEQQI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LS07 Uncharacterized protein

4.6e-88

83.73

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWKTEKK+LKEEVK+LRKKV E   +IEEG  GEKIATEWEM 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        G+ N IFEQIQQERARRDEAI+KWKQLYHAIK+ELDDLIQRTHNGDGL+WG  ER EALKT+LQAKEETIKALKE+VVSME +KY+R+REIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKEQQI
Subjt:  LTSKKEQQI

A0A1S3CLU2 uncharacterized protein LOC103502383

3.0e-87

82.3

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WKTEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        G+ N IFEQIQQERARRDEA++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSME +KY+R+REIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKEQQI
Subjt:  LTSKKEQQI

A0A5A7UW79 Golgin subfamily A member 6-like protein 2

2.5e-86

81.82

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSKDGSE   DDV+ LKEKIRLLREEVR V++EMDKETKAHEKDMVVFAFKEA WKTEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        G+ N IFEQIQQERARRDEA++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSME +KY+R+REIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKEQQI
Subjt:  LTSKKEQQI

A0A5D3BGY2 Golgin subfamily A member 6-like protein 2

3.0e-87

82.3

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WKTEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM 
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        G+ N IFEQIQQERARRDEA++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSME +KY+R+REIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        +TSKKEQQI
Subjt:  LTSKKEQQI

A0A6J1C2K1 uncharacterized protein PF11_0207-like

2.6e-107

99.52

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
        MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMD+ETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMV

Query:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
        GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI
Subjt:  GSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRI

Query:  LTSKKEQQI
        LTSKKEQQI
Subjt:  LTSKKEQQI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G23930.1 unknown protein

1.0e-26

41.26

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEA--GWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATE-W
        MG C+SK         VR +KE  +      R ++ E D+  K     ++    KEA   W+ E+KKL+EEV+ LRKK++ER    EE K+      E W
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEA--GWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATE-W

Query:  EMVGSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDG-------LYWGADE-----RAEALKTELQAKEETIKALKEKVVSMEHEKY
        + V       E++  ERA RDEA++KWKQLY AIK ELD LI  T +  G       L    +E     R E L+ E++ KEET++ L+E++V M+ +KY
Subjt:  EMVGSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDG-------LYWGADE-----RAEALKTELQAKEETIKALKEKVVSMEHEKY

Query:  ERDREIDILRQSLRILTSKKEQQ
        E++REID+LRQSLRIL SKK+++
Subjt:  ERDREIDILRQSLRILTSKKEQQ

AT4G13540.1 unknown protein

1.4e-23

40.1

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Query:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWE
        MG  +SKD     + +  + + K++   +  R    E+D      EK+ V+ A K  E  W+ E+K+L+EEVK LR+K++E+    EEGK+ +    EWE
Subjt:  MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWE

Query:  MVGSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADER----AEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDIL
         V       EQ+  ERA R+EA+++WKQLY AIK ELDDLI  T+ G+ L     E      + L+ E++A+ ETI+ LK ++  ME ++  ++REID+L
Subjt:  MVGSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADER----AEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDIL

Query:  RQSLRIL
        RQSLRIL
Subjt:  RQSLRIL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTGCATGCTCAAGCAAAGATGGCAGTGAGTTTTGTGATGATGATGTTAGAGAATTGAAAGAAAAGATAAGACTACTCAGGGAGGAAGTGAGGGGAGTGATGTCTGA
GATGGATAAGGAGACTAAAGCCCATGAGAAAGACATGGTGGTTTTCGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAGAAGAAACTCAAAGAGGAGGTGAAGGTGTTGA
GGAAGAAGGTAGACGAGAGGATGAAAGACATTGAAGAGGGAAAATCTGGAGAGAAAATTGCAACAGAATGGGAGATGGTGGGAAGTACAAATGCCATCTTTGAACAGATA
CAGCAGGAAAGAGCACGCAGAGATGAAGCCATTGACAAATGGAAGCAACTTTATCACGCTATCAAGATGGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGG
ATTGTATTGGGGAGCGGATGAGAGGGCAGAAGCACTAAAAACAGAATTGCAAGCAAAGGAAGAGACCATAAAAGCCCTCAAAGAAAAAGTAGTTTCAATGGAGCATGAAA
AATATGAGAGGGACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCCTGACGAGTAAGAAGGAACAACAGATT

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQI
QQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRILTSKKEQQI

MS001892 (gene) of Bitter gourd (TR) v1 genome