; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001909 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001909
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHomeobox protein knotted-1, putative
Genome locationscaffold30:908425..913777
RNA-Seq ExpressionMS001909
SyntenyMS001909
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587466.1 Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sororia]1.7e-11771.47Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        M DLYGLH +ADYS++SSSA PL++L+ P N Q YSTAS+D SH L  FGS  +  VSS   DAAL+  +      EEESA AIR KIASHPLYP+L++A
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG
        FVDCQK +GAPPE + NIL  S R +DIG     VST LGADPELD FMETYCGILAKY+LDLS P VEASSFLNNME QLNRLC G TRGYVSDE A G
Subjt:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG

Query:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
         S ED+SAGE+ELQ+SL ANED ELKDRLLRKY G++SSLK EFSKTKK  KLPKE+R ILLDWWN+H KWPYPTEMDK+ELAESTGLD KQI+NWFINQ
Subjt:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ

Query:  RKRHWKPSENMQFAIMHGL
        RKRHWK SENMQF  +HG+
Subjt:  RKRHWKPSENMQFAIMHGL

XP_022134694.1 homeobox protein knotted-1-like 6 isoform X1 [Momordica charantia]3.8e-17397.49Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKV------VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGG
        FVDCQKV      VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKY+LDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGG
Subjt:  FVDCQKV------VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGG

Query:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
        PS EDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
Subjt:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ

Query:  RKRHWKPSENMQFAIMHGL
        RKRHWKPSENMQFAIMHGL
Subjt:  RKRHWKPSENMQFAIMHGL

XP_022134695.1 homeobox protein knotted-1-like 6 isoform X2 [Momordica charantia]2.9e-17399.04Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGGPSVEDL
        FVDCQK VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKY+LDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGGPS EDL
Subjt:  FVDCQKVVGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGGPSVEDL

Query:  SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK
        SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK
Subjt:  SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK

Query:  PSENMQFAIMHGL
        PSENMQFAIMHGL
Subjt:  PSENMQFAIMHGL

XP_022928493.1 homeobox protein knotted-1-like 6 [Cucurbita moschata]1.3e-11771.47Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        M DLYGLH +ADYS++SSSA PL++L+ P N Q YSTAS+D SH L  FGS  +  VSS   DAAL+  +      EEESA AIR KIASHPLYP+L++A
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG
        FVDCQK +GAPPE + NIL  S R +DIG     VST LGADPELD FMETYCGILAKY+LDLS P VEASSFLNNME QLNRLC G TRGYVSDE A G
Subjt:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG

Query:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
         S ED+SAGE+ELQ+SL ANED ELKDRLLRKY G++SSLK EFSKTKK  KLPKE+R ILLDWWN+H KWPYPTEMDK+ELAESTGLD KQI+NWFINQ
Subjt:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ

Query:  RKRHWKPSENMQFAIMHGL
        RKRHWK SENMQF  +HG+
Subjt:  RKRHWKPSENMQFAIMHGL

XP_023531461.1 homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo]1.3e-11771.47Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        M DLYGLH +ADYS++SSSA PL++L+ P N Q YSTAS+D SH L  FGS  +  VSS   DAAL+  +      EEESA AIR KIASHPLYP+L++A
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG
        FVDCQK +GAPPE + NIL  S R +DIG     VST LGADPELD FMETYCGILAKY+LDLS P VEASSFLNNME QLNRLC G TRGYVSDE A G
Subjt:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG

Query:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
         S ED+SAGE+ELQ+SL ANED ELKDRLLRKY G++SSLK EFSKTKK  KLPKE+R ILLDWWN+H KWPYPTEMDK+ELAESTGLD KQI+NWFINQ
Subjt:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ

Query:  RKRHWKPSENMQFAIMHGL
        RKRHWK SENMQF  +HG+
Subjt:  RKRHWKPSENMQFAIMHGL

TrEMBL top hitse value%identityAlignment
A0A5J5BGH4 Uncharacterized protein2.7e-10062.81Show/hide
Query:  MGDLYGLHLVADYSHQSSSAP--PLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMV-EIQRARAVEEESAAAIRAKIASHPLYPKL
        M D+YGLH  ADYS      P  P E+L+ P N   +  AS     ++P FGS+ +   SSA SDAA MV EIQR  + EEE ++ IR KI+SHPLYPKL
Subjt:  MGDLYGLHLVADYSHQSSSAP--PLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMV-EIQRARAVEEESAAAIRAKIASHPLYPKL

Query:  LEAFVDCQKVVGAPPETIVNILDESQRRNDI----GVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAG
        LEA+VDCQK VGAPP+ I N+LDE +R N I     VSTCLGADPELD FMETYC IL KY+ DL+KP  EA++FLNN+E QL+ L IGA+R   SDEA 
Subjt:  LEAFVDCQKVVGAPPETIVNILDESQRRNDI----GVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAG

Query:  GPSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFIN
        G S +D S GE+E+Q     +EDGELKD+LLRKYSG+ISSLK+EFSK+KK  KLPKEA  ILL WW IH KWPYPTE DK+ LAESTGLDQKQI+NWFIN
Subjt:  GPSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFIN

Query:  QRKRHWKPSENMQFAIMHGL
        QRKRHW+PSENMQF++M  +
Subjt:  QRKRHWKPSENMQFAIMHGL

A0A6J1BZ15 homeobox protein knotted-1-like 6 isoform X21.4e-17399.04Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGGPSVEDL
        FVDCQK VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKY+LDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGGPS EDL
Subjt:  FVDCQKVVGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGGPSVEDL

Query:  SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK
        SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK
Subjt:  SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK

Query:  PSENMQFAIMHGL
        PSENMQFAIMHGL
Subjt:  PSENMQFAIMHGL

A0A6J1BZH2 homeobox protein knotted-1-like 6 isoform X11.8e-17397.49Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKV------VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGG
        FVDCQKV      VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKY+LDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGG
Subjt:  FVDCQKV------VGAPPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGG

Query:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
        PS EDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
Subjt:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ

Query:  RKRHWKPSENMQFAIMHGL
        RKRHWKPSENMQFAIMHGL
Subjt:  RKRHWKPSENMQFAIMHGL

A0A6J1EK44 homeobox protein knotted-1-like 66.4e-11871.47Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        M DLYGLH +ADYS++SSSA PL++L+ P N Q YSTAS+D SH L  FGS  +  VSS   DAAL+  +      EEESA AIR KIASHPLYP+L++A
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG
        FVDCQK +GAPPE + NIL  S R +DIG     VST LGADPELD FMETYCGILAKY+LDLS P VEASSFLNNME QLNRLC G TRGYVSDE A G
Subjt:  FVDCQKVVGAPPETIVNILDESQRRNDIG-----VSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG

Query:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
         S ED+SAGE+ELQ+SL ANED ELKDRLLRKY G++SSLK EFSKTKK  KLPKE+R ILLDWWN+H KWPYPTEMDK+ELAESTGLD KQI+NWFINQ
Subjt:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ

Query:  RKRHWKPSENMQFAIMHGL
        RKRHWK SENMQF  +HG+
Subjt:  RKRHWKPSENMQFAIMHGL

A0A6J1KV29 homeobox protein knotted-1-like 64.2e-11771.79Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        M DLYGLH +ADYS++SSSA PL++L+ P N Q YSTASAD SH L  FGS  +  VSS   DAAL V        EEESA AIR KIASHPLYP+L++A
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRNDI-----GVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG
        FVDCQK +GAPPE + NIL  S R  DI     GVSTCLGADPELD FMETYCGILAKY+LDLS P VEASSFLNNME QL+ LC G TRGYVSDE A G
Subjt:  FVDCQKVVGAPPETIVNILDESQRRNDI-----GVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDE-AGG

Query:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ
         S ED SAGE+ELQ+SL ANED ELKDRLLRKY G++SSLK EFSKTKK  KLPKE+R ILLDWWN+H KWPYPTEMDK ELAESTGLD KQI+NWFINQ
Subjt:  PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQ

Query:  RKRHWKPSENMQFAIMHGL
        RKRHWK SENMQF  +HG+
Subjt:  RKRHWKPSENMQFAIMHGL

SwissProt top hitse value%identityAlignment
P46639 Homeobox protein knotted-1-like 14.7e-6554.51Show/hide
Query:  AIRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNI------LDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQL
        A++AKI +HP Y  LL+A++DCQK +GAPP+ +  I       +  Q+R+   VS     DPELD FME YC +L KYR +L++P+ EA  F+  +E QL
Subjt:  AIRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNI------LDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQL

Query:  NRLC-----IGATRGYVSDEAGG--PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPT
        + LC     I       SD  G      E+ S GE EL E  P  ED ELK+ LL+KYSG++SSLK E SK KK GKLPKEAR  LL WW +H KWPYP+
Subjt:  NRLC-----IGATRGYVSDEAGG--PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPT

Query:  EMDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL
        E +KV LAESTGLDQKQI+NWFINQRKRHWKPSE+MQF +M GL
Subjt:  EMDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL

P46640 Homeobox protein knotted-1-like 25.3e-7750.79Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        M  + G     DYS ++       +L+ P++ Q+   ++   + RL  FGS+ LA     A  + L+  I++A   +  S + I++KIASHPLYP+LL+ 
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRN-----DIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG-ATRGYVSDEAGG
        ++DCQK VGAP E I  IL+E QR N     D+   +C GADPELD FMETYC IL KY+ DL++P  EA++F+N +EMQL  LC G A+   +SD+   
Subjt:  FVDCQKVVGAPPETIVNILDESQRRN-----DIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG-ATRGYVSDEAGG

Query:  PSVEDL-SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFIN
         S E+L    ++   +S   + D +LKD+LLRK+  HISSLK EFSK KK GKLP+EAR  LLDWWN+H+KWPYPTE DK+ LAE TGLDQKQI+NWFIN
Subjt:  PSVEDL-SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFIN

Query:  QRKRHWKPSENMQFAIM
        QRKRHWKPSENM F +M
Subjt:  QRKRHWKPSENMQFAIM

Q41330 Homeotic protein knotted-18.8e-6455.24Show/hide
Query:  ESAAAIRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNI------LDESQRRN--DIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLN
        E   A++AKI +HP    LL+A++DCQK VGAPPE    +       +  QRR+  D  VS     DPELD FME Y  +L KYR +L++PL EA  F+ 
Subjt:  ESAAAIRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNI------LDESQRRN--DIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLN

Query:  NMEMQLNRLCIGATRGYVSD---EAGGPSVEDL--SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKW
         +E QLN L     R + S+   E  G S ED   S GE EL E  P  ED ELK+ LLRKYSG++SSLK E SK KK GKLPK+AR  L+ WW +H KW
Subjt:  NMEMQLNRLCIGATRGYVSD---EAGGPSVEDL--SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKW

Query:  PYPTEMDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL
        PYP+E +KV LAESTGLDQKQI+NWFINQRKRHWKPSE+MQF +M GL
Subjt:  PYPTEMDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL

Q84JS6 Homeobox protein knotted-1-like 61.9e-8253.92Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGS-ELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLE
        M  +Y  H   DYS +S      ESL+FP++ Q    +SA  +     FGS ELL+   SA S  A  +  +  R  +  S   I+AKIA HP YP+LL+
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGS-ELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLE

Query:  AFVDCQKVVGAPPETIVNILDESQRRND-----IGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG--ATRGYVSDEA
        A++DCQK VGAPPE I  +L+E QR +D     +  S+C GADPELD FMETYC IL KY+ DL++P  EA+ FLN +EMQL  LC G  + RG VS++ 
Subjt:  AFVDCQKVVGAPPETIVNILDESQRRND-----IGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG--ATRGYVSDEA

Query:  GGPSVEDLSAGELEL-QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWF
           S E+LS G+ E+ ++     ED +LKDRLLRK+   IS+LK EFSK KK GKLP+EAR  LLDWWN+H KWPYPTE DK+ LA++TGLDQKQI+NWF
Subjt:  GGPSVEDLSAGELEL-QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWF

Query:  INQRKRHWKPSENMQFAIM
        INQRKRHWKPSENM FA+M
Subjt:  INQRKRHWKPSENMQFAIM

Q9FP29 Homeobox protein knotted-1-like 12.6e-6351.85Show/hide
Query:  IRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNILDESQRRNDI----GVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRL
        ++A+IA HP YP LL A+++C+K VGAPPE + ++L E  R        G +  +G DPELD FME YC +L +Y+ +LS+P  EA+SFL++++ QL+ L
Subjt:  IRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNILDESQRRNDI----GVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRL

Query:  CIG-----ATRGYVSDEAGGPSVEDLSAGELEL----QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTE
        C G     AT    SDE  G S ED  +GE ++    QE      D ELK+ LL+KYSG +S L+ EF K +K GKLPK+AR  LL+WWN H +WPYPTE
Subjt:  CIG-----ATRGYVSDEAGGPSVEDLSAGELEL----QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTE

Query:  MDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL
         DK+ LA  TGLD KQI+NWFINQRKRHWKPS+ M+FA+M G+
Subjt:  MDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 61.3e-8353.92Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGS-ELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLE
        M  +Y  H   DYS +S      ESL+FP++ Q    +SA  +     FGS ELL+   SA S  A  +  +  R  +  S   I+AKIA HP YP+LL+
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGS-ELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLE

Query:  AFVDCQKVVGAPPETIVNILDESQRRND-----IGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG--ATRGYVSDEA
        A++DCQK VGAPPE I  +L+E QR +D     +  S+C GADPELD FMETYC IL KY+ DL++P  EA+ FLN +EMQL  LC G  + RG VS++ 
Subjt:  AFVDCQKVVGAPPETIVNILDESQRRND-----IGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG--ATRGYVSDEA

Query:  GGPSVEDLSAGELEL-QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWF
           S E+LS G+ E+ ++     ED +LKDRLLRK+   IS+LK EFSK KK GKLP+EAR  LLDWWN+H KWPYPTE DK+ LA++TGLDQKQI+NWF
Subjt:  GGPSVEDLSAGELEL-QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWF

Query:  INQRKRHWKPSENMQFAIM
        INQRKRHWKPSENM FA+M
Subjt:  INQRKRHWKPSENMQFAIM

AT1G23380.2 KNOTTED1-like homeobox gene 62.3e-8353.75Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGS-ELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLE
        M  +Y  H   DYS +S      ESL+FP++ Q    +SA  +     FGS ELL+   SA S  A  +  +  R  +  S   I+AKIA HP YP+LL+
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGS-ELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLE

Query:  AFVDCQ-KVVGAPPETIVNILDESQRRND-----IGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG--ATRGYVSDE
        A++DCQ K VGAPPE I  +L+E QR +D     +  S+C GADPELD FMETYC IL KY+ DL++P  EA+ FLN +EMQL  LC G  + RG VS++
Subjt:  AFVDCQ-KVVGAPPETIVNILDESQRRND-----IGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG--ATRGYVSDE

Query:  AGGPSVEDLSAGELEL-QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNW
            S E+LS G+ E+ ++     ED +LKDRLLRK+   IS+LK EFSK KK GKLP+EAR  LLDWWN+H KWPYPTE DK+ LA++TGLDQKQI+NW
Subjt:  AGGPSVEDLSAGELEL-QESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNW

Query:  FINQRKRHWKPSENMQFAIM
        FINQRKRHWKPSENM FA+M
Subjt:  FINQRKRHWKPSENMQFAIM

AT1G62360.1 KNOX/ELK homeobox transcription factor2.0e-6344.52Show/hide
Query:  HQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFG------SELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEAFVDCQKVV
        HQ SS+  L+SL  P   +    +S+  S   PA+       +E++A   +  S ++              S+A+++AKI +HP Y +LL A+V+CQK V
Subjt:  HQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFG------SELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEAFVDCQKVV

Query:  GAPPETIVNILD----ESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGY--VSDEAGGPSVEDLSA
        GAPPE +  + +     +     +G + CLG DP LD FME YC +L KY  +LSKP  EA  FL  +E Q   L + +   +    + A   +    S 
Subjt:  GAPPETIVNILD----ESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGY--VSDEAGGPSVEDLSA

Query:  GELELQESL--PANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK
         E+++      P  ED ELK +LLRKYSG++ SLK EF K +K GKLPKEAR  LLDWW+ H KWPYP+E  K+ LAESTGLDQKQI+NWFINQRKRHWK
Subjt:  GELELQESL--PANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWK

Query:  PSENMQFAIM
        PSE+MQF +M
Subjt:  PSENMQFAIM

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 23.8e-7850.79Show/hide
Query:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA
        M  + G     DYS ++       +L+ P++ Q+   ++   + RL  FGS+ LA     A  + L+  I++A   +  S + I++KIASHPLYP+LL+ 
Subjt:  MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEA

Query:  FVDCQKVVGAPPETIVNILDESQRRN-----DIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG-ATRGYVSDEAGG
        ++DCQK VGAP E I  IL+E QR N     D+   +C GADPELD FMETYC IL KY+ DL++P  EA++F+N +EMQL  LC G A+   +SD+   
Subjt:  FVDCQKVVGAPPETIVNILDESQRRN-----DIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIG-ATRGYVSDEAGG

Query:  PSVEDL-SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFIN
         S E+L    ++   +S   + D +LKD+LLRK+  HISSLK EFSK KK GKLP+EAR  LLDWWN+H+KWPYPTE DK+ LAE TGLDQKQI+NWFIN
Subjt:  PSVEDL-SAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFIN

Query:  QRKRHWKPSENMQFAIM
        QRKRHWKPSENM F +M
Subjt:  QRKRHWKPSENMQFAIM

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana3.3e-6654.51Show/hide
Query:  AIRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNI------LDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQL
        A++AKI +HP Y  LL+A++DCQK +GAPP+ +  I       +  Q+R+   VS     DPELD FME YC +L KYR +L++P+ EA  F+  +E QL
Subjt:  AIRAKIASHPLYPKLLEAFVDCQKVVGAPPETIVNI------LDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQL

Query:  NRLC-----IGATRGYVSDEAGG--PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPT
        + LC     I       SD  G      E+ S GE EL E  P  ED ELK+ LL+KYSG++SSLK E SK KK GKLPKEAR  LL WW +H KWPYP+
Subjt:  NRLC-----IGATRGYVSDEAGG--PSVEDLSAGELELQESLPANEDGELKDRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPT

Query:  EMDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL
        E +KV LAESTGLDQKQI+NWFINQRKRHWKPSE+MQF +M GL
Subjt:  EMDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATCTGTACGGACTCCATCTCGTCGCCGATTACTCTCATCAGTCGTCTTCAGCGCCGCCGTTGGAGAGCCTCGTCTTTCCGGCTAATTGCCAAACCTATTCAAC
TGCTTCTGCAGATTGTTCTCATCGACTTCCGGCATTTGGATCGGAACTGTTGGCGCCGGTTTCGTCGGCGGCCTCCGATGCTGCTTTAATGGTGGAGATTCAGAGAGCAC
GTGCTGTCGAGGAGGAATCTGCCGCTGCAATTAGAGCGAAAATTGCTTCTCATCCTCTTTATCCTAAGCTTCTCGAGGCGTTTGTCGACTGCCAAAAGGTGGTCGGCGCA
CCGCCGGAGACGATTGTCAACATTCTTGACGAAAGCCAACGAAGAAATGACATCGGCGTTTCAACTTGCTTGGGTGCCGATCCCGAACTCGATGTGTTCATGGAAACGTA
CTGCGGGATACTGGCCAAGTACAGGTTGGATCTGTCCAAGCCCCTCGTTGAAGCATCTTCATTCCTCAACAACATGGAAATGCAATTAAACAGACTTTGTATCGGCGCCA
CCAGAGGCTACGTTTCCGATGAGGCTGGTGGTCCATCGGTAGAGGATCTGAGCGCCGGAGAATTGGAACTGCAGGAGTCTCTGCCGGCGAACGAAGATGGTGAGCTGAAG
GATCGACTCCTACGCAAGTACAGTGGTCATATTAGCAGCTTAAAGCACGAATTCTCAAAAACGAAAAAGATGGGAAAGCTACCGAAAGAAGCAAGACACATCCTGCTCGA
CTGGTGGAACATCCATTCCAAATGGCCTTACCCCACTGAGATGGACAAAGTTGAGCTGGCCGAGTCGACGGGCCTAGACCAGAAGCAAATAAGTAACTGGTTCATAAACC
AGAGAAAACGCCATTGGAAACCATCAGAAAATATGCAATTTGCTATTATGCATGGTCTT
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATCTGTACGGACTCCATCTCGTCGCCGATTACTCTCATCAGTCGTCTTCAGCGCCGCCGTTGGAGAGCCTCGTCTTTCCGGCTAATTGCCAAACCTATTCAAC
TGCTTCTGCAGATTGTTCTCATCGACTTCCGGCATTTGGATCGGAACTGTTGGCGCCGGTTTCGTCGGCGGCCTCCGATGCTGCTTTAATGGTGGAGATTCAGAGAGCAC
GTGCTGTCGAGGAGGAATCTGCCGCTGCAATTAGAGCGAAAATTGCTTCTCATCCTCTTTATCCTAAGCTTCTCGAGGCGTTTGTCGACTGCCAAAAGGTGGTCGGCGCA
CCGCCGGAGACGATTGTCAACATTCTTGACGAAAGCCAACGAAGAAATGACATCGGCGTTTCAACTTGCTTGGGTGCCGATCCCGAACTCGATGTGTTCATGGAAACGTA
CTGCGGGATACTGGCCAAGTACAGGTTGGATCTGTCCAAGCCCCTCGTTGAAGCATCTTCATTCCTCAACAACATGGAAATGCAATTAAACAGACTTTGTATCGGCGCCA
CCAGAGGCTACGTTTCCGATGAGGCTGGTGGTCCATCGGTAGAGGATCTGAGCGCCGGAGAATTGGAACTGCAGGAGTCTCTGCCGGCGAACGAAGATGGTGAGCTGAAG
GATCGACTCCTACGCAAGTACAGTGGTCATATTAGCAGCTTAAAGCACGAATTCTCAAAAACGAAAAAGATGGGAAAGCTACCGAAAGAAGCAAGACACATCCTGCTCGA
CTGGTGGAACATCCATTCCAAATGGCCTTACCCCACTGAGATGGACAAAGTTGAGCTGGCCGAGTCGACGGGCCTAGACCAGAAGCAAATAAGTAACTGGTTCATAAACC
AGAGAAAACGCCATTGGAAACCATCAGAAAATATGCAATTTGCTATTATGCATGGTCTT
Protein sequenceShow/hide protein sequence
MGDLYGLHLVADYSHQSSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSSAASDAALMVEIQRARAVEEESAAAIRAKIASHPLYPKLLEAFVDCQKVVGA
PPETIVNILDESQRRNDIGVSTCLGADPELDVFMETYCGILAKYRLDLSKPLVEASSFLNNMEMQLNRLCIGATRGYVSDEAGGPSVEDLSAGELELQESLPANEDGELK
DRLLRKYSGHISSLKHEFSKTKKMGKLPKEARHILLDWWNIHSKWPYPTEMDKVELAESTGLDQKQISNWFINQRKRHWKPSENMQFAIMHGL