; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001953 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001953
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold30:1242391..1243681
RNA-Seq ExpressionMS001953
SyntenyMS001953
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]1.0e-16983.65Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSI NASISLAP+ARDLPLPKKKRVR                         NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK
        LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDK
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK

Query:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP
        Q DQCSESSPRG+ VSQLDSCGD RNELGVGDGDS +E GRI QRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGG+PWACGGV+ VPTSCP
Subjt:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP

Query:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR
        ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+ETN+  GSPTLPLARSCSMISR
Subjt:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]3.9e-16983.6Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSI NASISLAP+ARDLPLPKKKRVR                         NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK
        LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDK
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK

Query:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP
        Q DQCSESSPRG+ VSQLDSCGD RNELGVGDGDS +E GRI QRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGG+PWACGGV+ VPTSCP
Subjt:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP

Query:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMIS
        ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+ETN+  GSPTLPLARSCSMIS
Subjt:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMIS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]5.2e-16983.16Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSI NASISLAP+ARDLPLPKKKRVR                         NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDD+
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK
        LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDK
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK

Query:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP
        QHDQCSESSPRG+ +SQLDSCGD RNELGVGDGDS +E GRI QRA M+CRAWRPDDAFRPQSLPTLSKQLSLP TDRR+GCGG+ WACGGV+ VPTSCP
Subjt:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP

Query:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
        ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+ETNV  GSPTLPLARSCSMISRS
Subjt:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]4.7e-17083.69Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSI NASISLAP+ARDLPLPKKKRVR                         NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK
        LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDK
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK

Query:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP
        Q DQCSESSPRG+ VSQLDSCGD RNELGVGDGDS +E GRI QRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGG+PWACGGV+ VPTSCP
Subjt:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP

Query:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
        ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+ETN+  GSPTLPLARSCSMISRS
Subjt:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS

XP_022134843.1 uncharacterized protein LOC111007016 [Momordica charantia]8.2e-19192.97Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSITNASISLAPSARDLPLPKKKR                         VKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEGDDDGLDDWEAIADALAATDKQHDQ
        LSSKKINMREIG DNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEGDDDGLDDWEAIADALAATDKQHDQ
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEGDDDGLDDWEAIADALAATDKQHDQ

Query:  CSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFE
        CSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFE
Subjt:  CSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFE

Query:  DLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
        DLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
Subjt:  DLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS

TrEMBL top hitse value%identityAlignment
A0A0A0LP94 RING-type domain-containing protein2.3e-15988.51Show/hide
Query:  VKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTG
        V+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDD+LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTG
Subjt:  VKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDKQHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRA
        SSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDKQHDQCSESSPRG+ +SQLDSCGD RNELGVGDGDS +E GRI QRA M+CRA
Subjt:  SSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDKQHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRA

Query:  WRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSE
        WRPDDAFRPQSLPTLSKQLSLP TDRR+GCGG+ WACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+E
Subjt:  WRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSE

Query:  TNVHGGSPTLPLARSCSMISRS
        TNV  GSPTLPLARSCSMISRS
Subjt:  TNVHGGSPTLPLARSCSMISRS

A0A1S3BVJ1 uncharacterized protein LOC1034939472.3e-17083.69Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSI NASISLAP+ARDLPLPKKKRVR                         NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK
        LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDK
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK

Query:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP
        Q DQCSESSPRG+ VSQLDSCGD RNELGVGDGDS +E GRI QRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGG+PWACGGV+ VPTSCP
Subjt:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP

Query:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
        ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+ETN+  GSPTLPLARSCSMISRS
Subjt:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X25.0e-17083.65Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSI NASISLAP+ARDLPLPKKKRVR                         NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK
        LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDK
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK

Query:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP
        Q DQCSESSPRG+ VSQLDSCGD RNELGVGDGDS +E GRI QRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGG+PWACGGV+ VPTSCP
Subjt:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP

Query:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR
        ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+ETN+  GSPTLPLARSCSMISR
Subjt:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X21.9e-16983.6Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSI NASISLAP+ARDLPLPKKKRVR                         NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT KDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK
        LSS+KINMREIGE+N  SVHH SD+S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDK
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDK

Query:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP
        Q DQCSESSPRG+ VSQLDSCGD RNELGVGDGDS +E GRI QRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGG+PWACGGV+ VPTSCP
Subjt:  QHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCP

Query:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMIS
        ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD+ETN+  GSPTLPLARSCSMIS
Subjt:  ICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMIS

A0A6J1C357 uncharacterized protein LOC1110070164.0e-19192.97Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        MVTDSITNASISLAPSARDLPLPKKKR                         VKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEGDDDGLDDWEAIADALAATDKQHDQ
        LSSKKINMREIG DNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEGDDDGLDDWEAIADALAATDKQHDQ
Subjt:  LSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEGDDDGLDDWEAIADALAATDKQHDQ

Query:  CSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFE
        CSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFE
Subjt:  CSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFE

Query:  DLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
        DLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
Subjt:  DLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS

SwissProt top hitse value%identityAlignment
A2YU42 Cellulose synthase-like protein D21.9e-0437.93Show/hide
Query:  DLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPL
        D      LPC C F++C  C    ++  G CPGC+ PY+    D   +V G  PTL L
Subjt:  DLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPL

O95628 CCR4-NOT transcription complex subunit 44.2e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYECDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYECDPA

P34909 General negative regulator of transcription subunit 41.1e-0948Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYE
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ Y+
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYE

Q09818 Putative general negative regulator of transcription C16C9.04c1.5e-0951.06Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPY
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPY

Q8BT14 CCR4-NOT transcription complex subunit 44.2e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYECDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYECDPA

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein4.9e-1627.67Show/hide
Query:  KLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSS
        KLKQ K+D RR+QW+S+    N    E   RL S++ K +   +  + +I+  +  ED+   +   S F+ SP        +S+L   DS          
Subjt:  KLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSS

Query:  SSCRSSSSGCRSGSITEEEGD--DDGLDDWEAIADALAATDKQHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDA
            S    C S  +TEEE +  DD  D+W+   DAL + +  +++ S          + D   D+   +         +C +  + AP +         
Subjt:  SSCRSSSSGCRSGSITEEEGD--DDGLDDWEAIADALAATDKQHDQCSESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDA

Query:  FRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSET--NVH
            ++   S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y+     S       
Subjt:  FRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSET--NVH

Query:  GGSPTLPLARSCSMISRS
         G  T+PL+ S   + R+
Subjt:  GGSPTLPLARSCSMISRS

AT3G48070.1 RING/U-box superfamily protein4.1e-6346.54Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNK--KWNEEDNRLDSVVIKTSKD
        M++DSITNAS + AP+ARD    KKKR                          +++KLKQSKL +RREQWLS+ A+ NK  K   E NR     I + K 
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNK--KWNEEDNRLDSVVIKTSKD

Query:  DNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEE-GDDDG-LDDWEAIADALAATDK
        D     +  +  + EDN G+  H+S F ES SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE  DDDG LDDWEAIADALAA D+
Subjt:  DNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEE-GDDDG-LDDWEAIADALAATDK

Query:  QHDQCS--ESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTS
        +H++ +  ES    + + Q    G +   L     DS+       +R   S +AWRPDD  RPQ LP L KQ S P  +  +           V  VP+S
Subjt:  QHDQCS--ESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTS

Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS
        CPIC+EDLDLTDS+FLPC CGFRLCLFCHK I + DGRCPGCRKPYE +    E +V GG  T+ LARS SM  RS
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS

AT3G48070.2 RING/U-box superfamily protein9.0e-6346.4Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNK--KWNEEDNRLDSVVIKTSKD
        M++DSITNAS + AP+ARD    KKKR                          +++KLKQSKL +RREQWLS+ A+ NK  K   E NR     I + K 
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNK--KWNEEDNRLDSVVIKTSKD

Query:  DNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEE-GDDDG-LDDWEAIADALAATDK
        D     +  +  + EDN G+  H+S F ES SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE  DDDG LDDWEAIADALAA D+
Subjt:  DNLSSKKINMREIGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEE-GDDDG-LDDWEAIADALAATDK

Query:  QHDQCS--ESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTS
        +H++ +  ES    + + Q    G +   L     DS+       +R   S +AWRPDD  RPQ LP L KQ S P  +  +           V  VP+S
Subjt:  QHDQCS--ESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTS

Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR
        CPIC+EDLDLTDS+FLPC CGFRLCLFCHK I + DGRCPGCRKPYE +    E +V GG  T+ LARS SM  R
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR

AT5G60170.1 RNA binding (RRM/RBD/RNP motifs) family protein1.8e-1037.84Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE------DGRCPGCRKPYE----------CDPADSETNV
        +CP+C E++DLTD    PC CG+++C++C   I++       +GRCP CR PY+          CD   SE N+
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE------DGRCPGCRKPYE----------CDPADSETNV

AT5G62910.1 RING/U-box superfamily protein2.3e-6646.98Show/hide
Query:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN
        M+TDSITNAS + AP  RD    KKKR                          K++K+KQ+KL +RREQWLS+ AV NK+  EE +     V ++ K  +
Subjt:  MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDN

Query:  LSSKKINMREIGEDNGGS--VHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEG---DDDG-LDDWEAIADALAAT
         SS K+   E  ++NGG+  +HH+S F ESPSNS        +GG  S  +F+G SS SS  SSSSG  SG+ITEEE    DDDG +DDWEA+ADALAA 
Subjt:  LSSKKINMREIGEDNGGS--VHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEG---DDDG-LDDWEAIADALAAT

Query:  D--KQHDQCSESSPRGDAVSQLDS--CGDSRNELG--VGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGV
        +  ++  +  ES     +V Q  S  C  S ++    VG  D K EC R++ R   S RAWR DD  RPQ LP L+KQLS P  D+R+            
Subjt:  D--KQHDQCSESSPRGDAVSQLDS--CGDSRNELG--VGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGV

Query:  MSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR
        +++P+SCPIC+EDLDLTDS+FLPC CGFRLCLFCHK I + DGRCPGCRKPYE +   +ET++ GG  T+ LARS SM  +
Subjt:  MSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACTGATTCGATCACCAATGCTTCAATTTCCTTGGCCCCAAGCGCCCGGGATTTACCCTTGCCCAAGAAGAAGAGGGTGAGGACTCTCTCTCTCTTTCTATTCAG
ACGTAAATCTTCTCAATTTTTCTTTTATTTTAAAGCCGATGATTTTGTCAAGAATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAG
GTGCTGTAAAGAACAAAAAATGGAACGAAGAAGACAATCGCCTTGATTCAGTGGTCATTAAAACGAGCAAAGACGATAATCTTTCCTCCAAGAAAATAAATATGAGGGAA
ATAGGAGAAGACAATGGTGGATCGGTTCACCACGACAGCGATTTTTCGGAGTCGCCGTCTAACAGCCCCCCTAGTCTTGCCAGTAGTATCTTGGGTGGAAATGATTCCGG
TCCTCATTTTACTGGGAGTAGCAGTAGCAGTAGCTGCCGTAGCAGCTCTAGCGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAAGGAGATGATGATGGCTTGGATGACT
GGGAGGCTATTGCTGATGCTCTAGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGGGGTGATGCTGTTTCTCAATTGGATTCTTGCGGAGATAGC
AGAAATGAGTTGGGTGTTGGAGATGGTGACTCGAAATTAGAATGTGGGAGAATTGCGCAGAGGGCTCCAATGAGTTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCC
TCAGAGTTTGCCCACTTTATCGAAGCAGCTTAGTTTACCAAATACAGACCGGCGTTATGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTCATGTCTGTGCCTACAT
CTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTGTGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGAT
GGGCGCTGTCCTGGGTGCAGGAAGCCATATGAGTGTGATCCTGCTGACAGTGAGACAAATGTACATGGTGGCAGCCCGACGTTACCATTAGCTCGTTCTTGTAGCATGAT
TTCAAGGTCT
mRNA sequenceShow/hide mRNA sequence
ATGGTAACTGATTCGATCACCAATGCTTCAATTTCCTTGGCCCCAAGCGCCCGGGATTTACCCTTGCCCAAGAAGAAGAGGGTGAGGACTCTCTCTCTCTTTCTATTCAG
ACGTAAATCTTCTCAATTTTTCTTTTATTTTAAAGCCGATGATTTTGTCAAGAATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAG
GTGCTGTAAAGAACAAAAAATGGAACGAAGAAGACAATCGCCTTGATTCAGTGGTCATTAAAACGAGCAAAGACGATAATCTTTCCTCCAAGAAAATAAATATGAGGGAA
ATAGGAGAAGACAATGGTGGATCGGTTCACCACGACAGCGATTTTTCGGAGTCGCCGTCTAACAGCCCCCCTAGTCTTGCCAGTAGTATCTTGGGTGGAAATGATTCCGG
TCCTCATTTTACTGGGAGTAGCAGTAGCAGTAGCTGCCGTAGCAGCTCTAGCGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAAGGAGATGATGATGGCTTGGATGACT
GGGAGGCTATTGCTGATGCTCTAGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGGGGTGATGCTGTTTCTCAATTGGATTCTTGCGGAGATAGC
AGAAATGAGTTGGGTGTTGGAGATGGTGACTCGAAATTAGAATGTGGGAGAATTGCGCAGAGGGCTCCAATGAGTTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCC
TCAGAGTTTGCCCACTTTATCGAAGCAGCTTAGTTTACCAAATACAGACCGGCGTTATGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTCATGTCTGTGCCTACAT
CTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTGTGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGAT
GGGCGCTGTCCTGGGTGCAGGAAGCCATATGAGTGTGATCCTGCTGACAGTGAGACAAATGTACATGGTGGCAGCCCGACGTTACCATTAGCTCGTTCTTGTAGCATGAT
TTCAAGGTCT
Protein sequenceShow/hide protein sequence
MVTDSITNASISLAPSARDLPLPKKKRVRTLSLFLFRRKSSQFFFYFKADDFVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTSKDDNLSSKKINMRE
IGEDNGGSVHHDSDFSESPSNSPPSLASSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEGDDDGLDDWEAIADALAATDKQHDQCSESSPRGDAVSQLDSCGDS
RNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEED
GRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS