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MS001979 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001979
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:1433190..1433377
RNA-Seq ExpressionMS001979
SyntenyMS001979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595064.1 Extra-large guanine nucleotide-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0647.76Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        ++  +K RN SK E +N  + F +KMR RIGI V V+SS NCY     + LGF MS+D+G++VL +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

XP_008440196.1 PREDICTED: uncharacterized protein LOC103484732 [Cucumis melo]7.9e-0646.27Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        +K  +K R+ SK E +N  + F +KM+ R+GI V V+ S NCY     + LGF MS+DVGDLV  +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

XP_022962653.1 uncharacterized protein LOC111463072 [Cucurbita moschata]3.6e-0650.79Show/hide
Query:  MKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        +K RN SK E +N  + F +KMR RIGI V V+SS NCY     + LGF MS+D+G++VL +C
Subjt:  MKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

XP_023518282.1 uncharacterized protein LOC111781808 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-0647.76Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        ++  +K RN SK E +N  + F +KMR R+GI V V+SS NCY     + LGF MS+DVG++VL +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

XP_023518283.1 uncharacterized protein LOC111781808 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-0647.76Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        ++  +K RN SK E +N  + F +KMR R+GI V V+SS NCY     + LGF MS+DVG++VL +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

TrEMBL top hitse value%identityAlignment
A0A0A0KFJ4 Uncharacterized protein1.1e-0547.76Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        +K  +K R+ SK E +N  + F  KM+ R+GI V V+SS NCY     + LGF MS+DVG LVL +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

A0A1S3B166 uncharacterized protein LOC1034847323.8e-0646.27Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        +K  +K R+ SK E +N  + F +KM+ R+GI V V+ S NCY     + LGF MS+DVGDLV  +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

A0A5D3CR98 Putative F6A14.6 protein3.8e-0646.27Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        +K  +K R+ SK E +N  + F +KM+ R+GI V V+ S NCY     + LGF MS+DVGDLV  +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

A0A6J1BYW7 uncharacterized protein LOC1110059493.2e-0547.76Show/hide
Query:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        +K  +K RN SK E +N  + F +KMR R+GITV V+SS   Y     + LGF +S+DV DLVL +C
Subjt:  VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

A0A6J1HFE7 uncharacterized protein LOC1114630721.7e-0650.79Show/hide
Query:  MKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC
        +K RN SK E +N  + F +KMR RIGI V V+SS NCY     + LGF MS+D+G++VL +C
Subjt:  MKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCY-----KVLGFRMSEDVGDLVLYSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAAAAAGTTCCATGAAAACCCGAAACTGCTCTAAATTTGAGATTATGAACACTTCAAGTGTGTTTACTGATAAGATGAGGGCAAGGATCGGAATCACAGTTGATGTTAA
TTCATCGAGCAATTGTTACAAGGTTCTTGGATTCCGGATGAGTGAAGACGTCGGAGATTTGGTTTTGTATTCTTGT
mRNA sequenceShow/hide mRNA sequence
GTAAAAAGTTCCATGAAAACCCGAAACTGCTCTAAATTTGAGATTATGAACACTTCAAGTGTGTTTACTGATAAGATGAGGGCAAGGATCGGAATCACAGTTGATGTTAA
TTCATCGAGCAATTGTTACAAGGTTCTTGGATTCCGGATGAGTGAAGACGTCGGAGATTTGGTTTTGTATTCTTGT
Protein sequenceShow/hide protein sequence
VKSSMKTRNCSKFEIMNTSSVFTDKMRARIGITVDVNSSSNCYKVLGFRMSEDVGDLVLYSC