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MS001995 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001995
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationscaffold30:1548236..1548520
RNA-Seq ExpressionMS001995
SyntenyMS001995
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2871.74Show/hide
Query:  LLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVPLKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNRS
        +L+ K ++F  +LAG  LC+QPQTASG+++IDLALKWV  KSPI NTH   SVK L MK M+LAPSPAM FDPNQSNKRGVKKGSDPIHNRS
Subjt:  LLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVPLKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNRS

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2671.88Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVL-CLQPQTASGVSSIDLALKWVPLKSPIVNTHKA-VSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR
        MGFL  RK + F+F+LAGFV   LQPQTASG+++ID+ALKWV  KSP ++THKA  S K LNMK MN+APSPAM FDPNQSNKR VKKGSDPIHNR
Subjt:  MGFLLNRKGMIFVFVLAGFVL-CLQPQTASGVSSIDLALKWVPLKSPIVNTHKA-VSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]1.3e-2066.34Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCL---QPQ-TASGVSSIDLALKWVPLKSP-IVNTHKAVSVKGLNMKKMNL-APSPAMAFDPNQSNKRGVKKGSDPIHNR
        MG L +RKG+ FVFV+A F+LC+   QPQ TA+G+S+ID ALKWV  KS   +NTHKA S    + K +NL APSPAM FDPNQSNKRGVKKGSDPIHNR
Subjt:  MGFLLNRKGMIFVFVLAGFVLCL---QPQ-TASGVSSIDLALKWVPLKSP-IVNTHKAVSVKGLNMKKMNL-APSPAMAFDPNQSNKRGVKKGSDPIHNR

Query:  S
        S
Subjt:  S

ONI08679.1 hypothetical protein PRUPE_5G193600 [Prunus persica]2.7e-1354.55Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR
        MGFL  R  ++FV +  GF L LQP+  SG+ S+DLAL+W       LKS  ++  KAV+V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR

PQQ10203.1 hypothetical protein Pyn_16404 [Prunus yedoensis var. nudiflora]3.5e-1354Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNRS
        MGFL  R  ++FV +  GF L LQP+  SG+ S+DLAL+W       LKS  ++  +AV+V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNRS

TrEMBL top hitse value%identityAlignment
A0A0A0LPD5 Uncharacterized protein6.5e-2166.34Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCL---QPQ-TASGVSSIDLALKWVPLKSP-IVNTHKAVSVKGLNMKKMNL-APSPAMAFDPNQSNKRGVKKGSDPIHNR
        MG L +RKG+ FVFV+A F+LC+   QPQ TA+G+S+ID ALKWV  KS   +NTHKA S    + K +NL APSPAM FDPNQSNKRGVKKGSDPIHNR
Subjt:  MGFLLNRKGMIFVFVLAGFVLCL---QPQ-TASGVSSIDLALKWVPLKSP-IVNTHKAVSVKGLNMKKMNL-APSPAMAFDPNQSNKRGVKKGSDPIHNR

Query:  S
        S
Subjt:  S

A0A2P5F704 CLAVATA3/ESR-RELATED1.1e-1250.52Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVPLKSPIV-NTH--KAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR
        MG L NR  ++ + +  GF L L P+  S + S DLALKW   K P + N H  KAV++  L  +K++LAP+P++ FDPNQSNKR V++GSDPIHNR
Subjt:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVPLKSPIV-NTH--KAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR

A0A314XM06 Uncharacterized protein1.3e-1354.55Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR
        MGFL  R  ++FV +  GF L LQP+  SG+ S+DLAL+W       LKS  ++  KAV+V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR

A0A314YU30 Uncharacterized protein1.7e-1354Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNRS
        MGFL  R  ++FV +  GF L LQP+  SG+ S+DLAL+W       LKS  ++  +AV+V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNRS

M5WYZ5 Uncharacterized protein1.3e-1354.55Show/hide
Query:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR
        MGFL  R  ++FV +  GF L LQP+  SG+ S+DLAL+W       LKS  ++  KAV+V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVP-----LKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCTTGCTTAACAGGAAAGGCATGATTTTTGTCTTCGTTCTTGCTGGGTTTGTTTTGTGTCTTCAACCTCAAACCGCATCTGGGGTCAGCTCCATTGATCTTGC
TCTCAAATGGGTGCCCTTAAAATCCCCCATTGTCAACACCCACAAGGCTGTTTCTGTGAAAGGATTGAATATGAAGAAGATGAACTTGGCTCCATCCCCTGCCATGGCTT
TTGACCCGAACCAATCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGAAGC
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTCTTGCTTAACAGGAAAGGCATGATTTTTGTCTTCGTTCTTGCTGGGTTTGTTTTGTGTCTTCAACCTCAAACCGCATCTGGGGTCAGCTCCATTGATCTTGC
TCTCAAATGGGTGCCCTTAAAATCCCCCATTGTCAACACCCACAAGGCTGTTTCTGTGAAAGGATTGAATATGAAGAAGATGAACTTGGCTCCATCCCCTGCCATGGCTT
TTGACCCGAACCAATCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGAAGC
Protein sequenceShow/hide protein sequence
MGFLLNRKGMIFVFVLAGFVLCLQPQTASGVSSIDLALKWVPLKSPIVNTHKAVSVKGLNMKKMNLAPSPAMAFDPNQSNKRGVKKGSDPIHNRS