; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002014 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002014
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLYR motif-containing protein 4-like
Genome locationscaffold30:1797916..1798185
RNA-Seq ExpressionMS002014
SyntenyMS002014
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453246.1 PREDICTED: LYR motif-containing protein 4 [Cucumis melo]5.0e-3381.11Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MA PTR+EALSLLRSL+RT+R FCDYN+REYAKRR VDGFRHNRNLSDPSSISSAYADG+AQLEVA+RQS +YS +APKVKSIM+ H  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

XP_011660289.1 LYR motif-containing protein 4 [Cucumis sativus]8.5e-3382.22Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MA+PTR+EALSLLRSL+RTARHF DYN+REYAKRRAVDGFRHNRNLSDP SISSAYADG+AQLEVA+RQS VYS + PKVKSIM+ H  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

XP_022134602.1 LYR motif-containing protein 4-like [Momordica charantia]1.3e-41100Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

XP_022932898.1 LYR motif-containing protein 4 [Cucurbita moschata]1.2e-3485.56Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MATPTR+E+LSLLRSLLRTARHFCDYN+REYAKRRAVDGFRHNRNLSDPSSI  AYADG+AQLEVA+RQSTVYS F+PKVKSIM+ H  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

XP_038879775.1 LYR motif-containing protein 4-like [Benincasa hispida]1.2e-3484.44Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        M  PTR+EALSLLRS LRTARHFCDYN+REYAKRRAVDGFRHNRNLSDP SISSAYADG+AQLEVA+RQS VYS +APKVKSIM+PH  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

TrEMBL top hitse value%identityAlignment
A0A1S3BV74 LYR motif-containing protein 42.4e-3381.11Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MA PTR+EALSLLRSL+RT+R FCDYN+REYAKRR VDGFRHNRNLSDPSSISSAYADG+AQLEVA+RQS +YS +APKVKSIM+ H  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

A0A5A7UTC8 LYR motif-containing protein 42.4e-3381.11Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MA PTR+EALSLLRSL+RT+R FCDYN+REYAKRR VDGFRHNRNLSDPSSISSAYADG+AQLEVA+RQS +YS +APKVKSIM+ H  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

A0A6J1C021 LYR motif-containing protein 4-like6.3e-42100Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

A0A6J1F322 LYR motif-containing protein 45.7e-3585.56Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MATPTR+E+LSLLRSLLRTARHFCDYN+REYAKRRAVDGFRHNRNLSDPSSI  AYADG+AQLEVA+RQSTVYS F+PKVKSIM+ H  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

A0A6J1IC29 LYR motif-containing protein 45.7e-3585.56Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN
        MATPTR+E+LSLLRSLLRTARHFCDYN+REYAKRRAVDGFRHNRNLSDPSSI  AYADG+AQLEVA+RQSTVYS F+PKVKSIM+ H  N
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN

SwissProt top hitse value%identityAlignment
B5X5U9 LYR motif-containing protein 4A1.8e-0637.5Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTV
        MA  +RT+ +SL R L++ ++ F  YN R YA RR  D FR N ++ +P ++       R  L V RRQ ++
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTV

B8JLQ0 LYR motif-containing protein 41.8e-0630.68Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHP
        MA+ +R + +SL R L++ ++ F  YN R YA RR  DGFR N ++ +P ++       R  L V +RQ ++   ++ + +++++  P
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHP

O46098 Protein bcn927.0e-0643.08Show/hide
Query:  TRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQ
        TR +A++L R+LLR +     YN R YA R+  D FR NR+  D + I    A+G+  LE+ RRQ
Subjt:  TRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQ

Q6Q560 Protein ISD112.0e-0532.88Show/hide
Query:  PTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFF
        PTR + LSL +  ++ A  F +YN REY   +    FR N N  DP  + + + + +  L V +RQS +   +
Subjt:  PTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFF

Q8K215 LYR motif-containing protein 41.5e-0842.03Show/hide
Query:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQ
        MA  +R + L L R+++R ++HF  YN R YA RR  D FR N+N+ DP  I +     +  LE+ RRQ
Subjt:  MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQ

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein3.3e-1955.7Show/hide
Query:  TEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMD
        +E LSL R+LLR  R F DYN+REY+KRR +DGFR N+NL+DPS ++ AYA+ + QL VA R   VY  + PK K+IM+
Subjt:  TEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTCCGACGAGGACGGAGGCTCTTTCGCTTCTTCGCTCTCTCCTCCGTACAGCCCGTCACTTCTGCGATTACAACGTCAGAGAGTACGCCAAGCGGCGCGCCGT
CGACGGCTTCCGCCATAACAGGAACCTCTCCGATCCTTCGTCCATCTCCTCAGCCTACGCCGACGGCAGGGCCCAGCTCGAAGTTGCCCGAAGACAGTCCACTGTCTACT
CCTTCTTCGCGCCCAAGGTCAAGAGCATCATGGACCCTCATCCCGCAAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTCCGACGAGGACGGAGGCTCTTTCGCTTCTTCGCTCTCTCCTCCGTACAGCCCGTCACTTCTGCGATTACAACGTCAGAGAGTACGCCAAGCGGCGCGCCGT
CGACGGCTTCCGCCATAACAGGAACCTCTCCGATCCTTCGTCCATCTCCTCAGCCTACGCCGACGGCAGGGCCCAGCTCGAAGTTGCCCGAAGACAGTCCACTGTCTACT
CCTTCTTCGCGCCCAAGGTCAAGAGCATCATGGACCCTCATCCCGCAAAC
Protein sequenceShow/hide protein sequence
MATPTRTEALSLLRSLLRTARHFCDYNVREYAKRRAVDGFRHNRNLSDPSSISSAYADGRAQLEVARRQSTVYSFFAPKVKSIMDPHPAN