; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002024 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002024
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:1858367..1858684
RNA-Seq ExpressionMS002024
SyntenyMS002024
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4392625.1 hypothetical protein F8388_003045 [Cannabis sativa]1.4e-0738.1Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVS---------IAWKLWKQV
        +P  + S LYDS E HA++  L +A Q    FSP +++  NSPFYR+R NQIYK++ +S+ ++T  + ++     G+ S  S         +  +LWK+V
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVS---------IAWKLWKQV

Query:  KQGLM
        KQGL+
Subjt:  KQGLM

KAF4403081.1 hypothetical protein G4B88_027852 [Cannabis sativa]1.9e-0740Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSI-AW--------KLWKQV
        +P  + S LYDS E HA++  L +A Q    FSP +++  NSPFYR+R NQIYK++ +S+ ++T  + ++     G+ S  S  AW        +LWK+V
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSI-AW--------KLWKQV

Query:  KQGLM
        KQGL+
Subjt:  KQGLM

KGN53885.1 hypothetical protein Csa_011823 [Cucumis sativus]1.0e-2457.5Show/hide
Query:  MEEQAVGAPKDRPSNLYDSQEFHAMMSHLKRASQFSPM----HLFNSPFYRQRLNQIYKQSADSTNRITWQH--------EATKERA--RGTVSNVSIAW
        MEEQ  GAPKD  SNLYD QEF AM+ HL +A+ FSP     HL NSPFYRQRLN+IYK S  ST +I W          E +K R   RG +SN S+A 
Subjt:  MEEQAVGAPKDRPSNLYDSQEFHAMMSHLKRASQFSPM----HLFNSPFYRQRLNQIYKQSADSTNRITWQH--------EATKERA--RGTVSNVSIAW

Query:  KLWKQVKQGLMGILPKKHVK
        +LWKQ+K GLMGILPKK +K
Subjt:  KLWKQVKQGLMGILPKKHVK

PON68950.1 hypothetical protein PanWU01x14_092670 [Parasponia andersonii]1.1e-0435.92Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLFN--SPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSIAW--------KLWKQVK
        +P  + S+LYDS E  A++  L +A Q    FSP +++N  SPFYR+RLN+IY+++ +S   +T  + ++        SN   AW        +LW++VK
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLFN--SPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSIAW--------KLWKQVK

Query:  QGL
        +GL
Subjt:  QGL

PON70340.1 hypothetical protein TorRG33x02_257060 [Trema orientale]5.7e-0433.01Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRA----SQFSPMHLFN--SPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSIAW--------KLWKQVK
        +P  + S+LYDS E  A++  L +A      FSP +++N  SPFYR+RLN+IY+++ +S   +T  + ++      + ++   AW        +LW++VK
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRA----SQFSPMHLFN--SPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSIAW--------KLWKQVK

Query:  QGL
        +GL
Subjt:  QGL

TrEMBL top hitse value%identityAlignment
A0A0A0KW83 Uncharacterized protein4.8e-2557.5Show/hide
Query:  MEEQAVGAPKDRPSNLYDSQEFHAMMSHLKRASQFSPM----HLFNSPFYRQRLNQIYKQSADSTNRITWQH--------EATKERA--RGTVSNVSIAW
        MEEQ  GAPKD  SNLYD QEF AM+ HL +A+ FSP     HL NSPFYRQRLN+IYK S  ST +I W          E +K R   RG +SN S+A 
Subjt:  MEEQAVGAPKDRPSNLYDSQEFHAMMSHLKRASQFSPM----HLFNSPFYRQRLNQIYKQSADSTNRITWQH--------EATKERA--RGTVSNVSIAW

Query:  KLWKQVKQGLMGILPKKHVK
        +LWKQ+K GLMGILPKK +K
Subjt:  KLWKQVKQGLMGILPKKHVK

A0A2P5D6L7 Uncharacterized protein5.6e-0535.92Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLFN--SPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSIAW--------KLWKQVK
        +P  + S+LYDS E  A++  L +A Q    FSP +++N  SPFYR+RLN+IY+++ +S   +T  + ++        SN   AW        +LW++VK
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLFN--SPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSIAW--------KLWKQVK

Query:  QGL
        +GL
Subjt:  QGL

A0A7J6HC11 Uncharacterized protein7.0e-0838.1Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVS---------IAWKLWKQV
        +P  + S LYDS E HA++  L +A Q    FSP +++  NSPFYR+R NQIYK++ +S+ ++T  + ++     G+ S  S         +  +LWK+V
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVS---------IAWKLWKQV

Query:  KQGLM
        KQGL+
Subjt:  KQGLM

A0A7J6I7R6 Uncharacterized protein9.2e-0840Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSI-AW--------KLWKQV
        +P  + S LYDS E HA++  L +A Q    FSP +++  NSPFYR+R NQIYK++ +S+ ++T  + ++     G+ S  S  AW        +LWK+V
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSI-AW--------KLWKQV

Query:  KQGLM
        KQGL+
Subjt:  KQGLM

A0A803P9L1 Uncharacterized protein7.0e-0838.1Show/hide
Query:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVS---------IAWKLWKQV
        +P  + S LYDS E HA++  L +A Q    FSP +++  NSPFYR+R NQIYK++ +S+ ++T  + ++     G+ S  S         +  +LWK+V
Subjt:  APKDRPSNLYDSQEFHAMMSHLKRASQ----FSPMHLF--NSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVS---------IAWKLWKQV

Query:  KQGLM
        KQGL+
Subjt:  KQGLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACAGGCTGTGGGAGCTCCCAAAGATCGTCCTAGTAATCTGTACGACTCACAAGAGTTTCACGCGATGATGAGTCATTTGAAGAGGGCCTCACAATTTAGTCC
CATGCACTTGTTCAATTCACCATTCTATCGTCAACGTTTAAATCAAATATATAAACAAAGTGCTGATTCCACCAACAGAATCACGTGGCAGCACGAAGCCACCAAGGAGA
GGGCTAGGGGGACGGTTTCAAATGTGTCAATTGCTTGGAAGCTATGGAAACAAGTTAAGCAAGGCCTCATGGGCATTCTTCCAAAGAAACATGTCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACAGGCTGTGGGAGCTCCCAAAGATCGTCCTAGTAATCTGTACGACTCACAAGAGTTTCACGCGATGATGAGTCATTTGAAGAGGGCCTCACAATTTAGTCC
CATGCACTTGTTCAATTCACCATTCTATCGTCAACGTTTAAATCAAATATATAAACAAAGTGCTGATTCCACCAACAGAATCACGTGGCAGCACGAAGCCACCAAGGAGA
GGGCTAGGGGGACGGTTTCAAATGTGTCAATTGCTTGGAAGCTATGGAAACAAGTTAAGCAAGGCCTCATGGGCATTCTTCCAAAGAAACATGTCAAG
Protein sequenceShow/hide protein sequence
MEEQAVGAPKDRPSNLYDSQEFHAMMSHLKRASQFSPMHLFNSPFYRQRLNQIYKQSADSTNRITWQHEATKERARGTVSNVSIAWKLWKQVKQGLMGILPKKHVK