CuGenDBv2

Gene ID	MS002025
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein Asterix
Genome location	scaffold30:1863586..1863921
RNA-Seq Expression	MS002025
Synteny	MS002025
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0045048 - protein insertion into ER membrane (biological process) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005351 - PAT complex subunit Asterix

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587575.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-33

95.06

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKP+V+PAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRNMENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

KAG7021543.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-33

95.06

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKP+V+PAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRNMENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

XP_022134591.1 protein Asterix [Momordica charantia]

4.8e-35

100

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

XP_022933634.1 protein Asterix-like [Cucurbita moschata]

2.0e-33

95.06

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKP+V+PAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRNMENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

XP_038880376.1 protein Asterix [Benincasa hispida]

2.6e-33

95.06

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKP+VAPAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRN+ENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSF0 Uncharacterized protein

3.7e-33

93.83

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSA KP+VAPAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRN+ENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

A0A5A7UWJ6 Protein Asterix

3.7e-33

93.83

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSA KP+VAPAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRN+ENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

A0A6J1BY81 protein Asterix

2.3e-35

100

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

A0A6J1F0A5 protein Asterix-like

9.7e-34

95.06

Show/hide

Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKP+V+PAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRNMENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

A0A6J1KYK4 protein Asterix-like

9.7e-34

95.06

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Query:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        MSTQANDPRQPSAAKP+V+PAV+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL NMRNMENDLKQISMAMM
Subjt:  MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

SwissProt top hits

e value

%identity

Alignment

Q9SD88 Protein Asterix

1.4e-29

77.5

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Query:  STQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        ++  NDPRQPSAAKPY+   V+P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSL NMRN+ENDLKQISMAMM
Subjt:  STQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

Arabidopsis top hits

e value

%identity

Alignment

AT5G07960.1 unknown protein

9.9e-31

77.5

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Query:  STQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM
        ++  NDPRQPSAAKPY+   V+P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSL NMRN+ENDLKQISMAMM
Subjt:  STQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

Sequences

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CDS sequence

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ATGTCGACACAAGCTAACGATCCACGGCAGCCGTCTGCGGCGAAGCCTTACGTTGCTCCGGCGGTGAGCCCGCAAGATCTGCCGGTCGATTATTCCGGTTTCATCGCCGT
AGTTTTCGGCATCGCCGGTGTCATGTTCAGGTACAAGCTTAGTTCGTGGCTGGCCATCATATTTTGCGCCCAATCGTTAGTGAATATGAGGAACATGGAGAACGATCTTA
AGCAGATTTCCATGGCCATGATG

mRNA sequence

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Protein sequence

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MSTQANDPRQPSAAKPYVAPAVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLVNMRNMENDLKQISMAMM

MS002025 (gene) of Bitter gourd (TR) v1 genome