; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002070 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002070
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationscaffold30:2193236..2193418
RNA-Seq ExpressionMS002070
SyntenyMS002070
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]8.9e-1875.44Show/hide
Query:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        DTGPGPY V PP CDPM+HGQ QPYPP+VPPQG TK + VPP  +TK RGDGFCRGL
Subjt:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]4.6e-2280.33Show/hide
Query:  HNFIDTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        HNFIDTGPGPY VAPPMCDPM+HGQ QPYPP+VPPQG TK + VPP  +TK RGDGFCRGL
Subjt:  HNFIDTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0971.11Show/hide
Query:  MCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        MCDPM+HGQ QPY  ++PPQG TK Q V P RET S+GDGFCRGL
Subjt:  MCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1675.44Show/hide
Query:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        DTGPGPY VAPPMCDPM+HGQ QPY  ++PPQG TK Q V P RET S+GDGFCRGL
Subjt:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]1.2e-1777.19Show/hide
Query:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        DTGPGPY VAPPMCDPM+HGQ QPY  ++PPQG TK QIV P RET S+GDGFCRGL
Subjt:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein2.2e-2280.33Show/hide
Query:  HNFIDTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        HNFIDTGPGPY VAPPMCDPM+HGQ QPYPP+VPPQG TK + VPP  +TK RGDGFCRGL
Subjt:  HNFIDTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

A0A5A7UV38 Uncharacterized protein4.3e-1875.44Show/hide
Query:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        DTGPGPY V PP CDPM+HGQ QPYPP+VPPQG TK + VPP  +TK RGDGFCRGL
Subjt:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like5.6e-1877.19Show/hide
Query:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL
        DTGPGPY VAPPMCDPM+HGQ QPY  ++PPQG TK QIV P RET S+GDGFCRGL
Subjt:  DTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATAACTTTATAGATACTGGACCAGGTCCTTACTCAGTTGCCCCACCTATGTGTGATCCAATGAAACATGGTCAGTTTCAGCCATACCCTCCAGTTGTACCTCCTCAAGG
GGGAACCAAGCCTCAAATTGTACCTCCTCTAAGGGAAACCAAGTCTAGAGGCGATGGGTTTTGCAGAGGATTG
mRNA sequenceShow/hide mRNA sequence
CATAACTTTATAGATACTGGACCAGGTCCTTACTCAGTTGCCCCACCTATGTGTGATCCAATGAAACATGGTCAGTTTCAGCCATACCCTCCAGTTGTACCTCCTCAAGG
GGGAACCAAGCCTCAAATTGTACCTCCTCTAAGGGAAACCAAGTCTAGAGGCGATGGGTTTTGCAGAGGATTG
Protein sequenceShow/hide protein sequence
HNFIDTGPGPYSVAPPMCDPMKHGQFQPYPPVVPPQGGTKPQIVPPLRETKSRGDGFCRGL