; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002080 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002080
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontetraspanin-11-like
Genome locationscaffold30:2242576..2243816
RNA-Seq ExpressionMS002080
SyntenyMS002080
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018499 - Tetraspanin/Peripherin
IPR044991 - Tetraspani, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058035.1 tetraspanin-11 [Cucumis melo var. makuwa]4.5e-11980.61Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN VVG++NCCTL +GLI I AS+Y RIR G SDCQKVIQ+PLL+LGIFL V+SLLGLVGSFCRLN +LY+YL VLFLLI+GI+AFTIF +LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        VG TVSGKGYKEYRLGDYSNWLQKYVVN KNWDEIRSCL+DAK+CESLGNNN P V +EFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKS      
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        A GDC+KWSNEQ  LCY CD+CKGGVL N+RKEWR+ AI N CVL  VTIVYCIGCCATRNNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

TYK28381.1 tetraspanin-11 [Cucumis melo var. makuwa]1.2e-11980.99Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN VVG++NCCTL +GLI I AS+Y RIR G SDCQKVIQ+PLL+LGIFL V+SLLGLVGSFCRLN +LY+YL VLFLLI+GI+AFTIF +LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        VG TVSGKGYKEYRLGDYSNWLQKYVVN KNWDEIRSCL+DAK+CESLGNNN P V DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKS      
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        A GDC+KWSNEQ  LCY CD+CKGGVL N+RKEWR+ AI N CVL  VTIVYCIGCCATRNNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

XP_004138326.1 tetraspanin-11 [Cucumis sativus]1.7e-11878.71Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN V+G++NCCTL +GLI I AS+Y RIR G SDCQKVIQ+PLLILGIFL V+SLLGLVGSFCRLN +LY+YL VLFLLI+G++AFTIF +LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        VGRTVSGKGYKEYRLGDYSNWLQKYVVN KNW+EIRSCL+DAK+CESLGN+N P V DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKS      
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        A GDC++WSN+Q  LCY CD+CKGGVL N+RKEWR+F+I N CVL  VTI+YCIGCCAT+NNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

XP_022135321.1 tetraspanin-11-like [Momordica charantia]6.7e-14798.85Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGG SDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA
        VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNN PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA

Query:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        EGDCRKWSNEQET CYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
Subjt:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

XP_038880558.1 tetraspanin-11-like [Benincasa hispida]4.1e-12080.99Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN VVGI+NCCTL +GLI I  S+Y RIR G SDCQKVIQNPLLILGIFL V+SLLGL+GSFCR+N +LY+YL VLFL+I+GI+AFTIFA+LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        VGRTVSGKG+KEYRLGD+SNWLQKYVVN KNWDEIRSCL+DAK+CESLGNNN P V++EFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKS   G A
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
          GDC+KWSN+Q  LCYGCD+CKGGVLANIRKEWR+FAI N CVL  VTI+YCIGCCA RNNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

TrEMBL top hitse value%identityAlignment
A0A0A0LSH1 Uncharacterized protein8.3e-11978.71Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN V+G++NCCTL +GLI I AS+Y RIR G SDCQKVIQ+PLLILGIFL V+SLLGLVGSFCRLN +LY+YL VLFLLI+G++AFTIF +LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        VGRTVSGKGYKEYRLGDYSNWLQKYVVN KNW+EIRSCL+DAK+CESLGN+N P V DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKS      
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        A GDC++WSN+Q  LCY CD+CKGGVL N+RKEWR+F+I N CVL  VTI+YCIGCCAT+NNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

A0A5A7UWP1 Tetraspanin-112.2e-11980.61Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN VVG++NCCTL +GLI I AS+Y RIR G SDCQKVIQ+PLL+LGIFL V+SLLGLVGSFCRLN +LY+YL VLFLLI+GI+AFTIF +LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        VG TVSGKGYKEYRLGDYSNWLQKYVVN KNWDEIRSCL+DAK+CESLGNNN P V +EFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKS      
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        A GDC+KWSNEQ  LCY CD+CKGGVL N+RKEWR+ AI N CVL  VTIVYCIGCCATRNNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

A0A5D3DXT2 Tetraspanin-115.8e-12080.99Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN VVG++NCCTL +GLI I AS+Y RIR G SDCQKVIQ+PLL+LGIFL V+SLLGLVGSFCRLN +LY+YL VLFLLI+GI+AFTIF +LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        VG TVSGKGYKEYRLGDYSNWLQKYVVN KNWDEIRSCL+DAK+CESLGNNN P V DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKS      
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        A GDC+KWSNEQ  LCY CD+CKGGVL N+RKEWR+ AI N CVL  VTIVYCIGCCATRNNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

A0A6J1C0C1 tetraspanin-11-like3.2e-14798.85Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGG SDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA
        VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNN PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA

Query:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        EGDCRKWSNEQET CYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
Subjt:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

A0A6J1EIU8 tetraspanin-11-like6.4e-11175.19Show/hide
Query:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG
        PRLSN V+GI+N CTL +GL A  AS+Y RIRG  +DCQKVI+NPLLILG+ L+V+SLLGLVGS  RLN +LY+YLT+LFLLI+G +AFTIFA+LVTNKG
Subjt:  PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKG

Query:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA
        VGRTVSGKGY EYRLGDYS+WLQKYVVN ++W+EIRSCLVDAK+C+SL +N P V  EFYKKNLSPIQSGCCKPPSECGFE KNAT WTVPKSGP    A
Subjt:  VGRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA

Query:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        E DC+KWSN++  LCY C++CK GVL+NIRK+WR FAI N CVLAF+TIVYCIGCCATRNNK
Subjt:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

SwissProt top hitse value%identityAlignment
Q8S8Q6 Tetraspanin-81.2e-6947.73Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        R SN +VGI+N     + +  +   I+   + G ++C++ +  P++ LG+FL+V+++ GL+GS CR+  LL++YL V+FLLI+ +   T+FA +VTNKG 
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGN---NNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGT
        G  + GKGYKEY+LGDYS WLQK V N KNW++IRSCLV++KVC  L     N P+  + FYK++L+ +QSGCCKP  ECGFE+ N T WT       GT
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGN---NNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGT

Query:  AAEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
            DC+ W N +E LC+ C SCK G+L N++  W+  AI+N   L F+ IVY +GCCA RNNK
Subjt:  AAEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

Q9FN51 Tetraspanin-121.9e-5641.76Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        RLSN  V   N     +GL A+  S+Y  ++ G S CQ+ +QNPL++    L  +S LGL+ +    + ++ +YL  LFL I+ ++  ++F  LVTN   
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAE
        G+ +SG+G    + GDY NW+  + +  KNW+ I  CL D++VC+  G  +     +F  K+LS +Q GCC+PP ECGFE KNAT+WTVP +    TA  
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAE

Query:  GDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        GDC+ WSN Q  LCY C+SCK GVL  IRK WR   ++N  ++  V  +Y  GCC  +NN+
Subjt:  GDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

Q9LPR6 Tetraspanin-114.3e-7251.15Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        R+SN +VG+ N   + VG  AIG SIY  +  G +DC+  I+ PLL  G+ L ++SLLG++GS  + N  +  YL +LF  IV ++ F+IF   VTNKG 
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA
        GR VSG+GYKEYR  D+S WL  + V  K W  IRSCL +A VC+ L +     + D FY KNLSPIQSGCCKPPS+C FEF+NATFW  P       A 
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA

Query:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
         GDC  WSN Q  LC+ C++CK GVLANIR++WRN  + N C+L  +  VY  GCCA RNN+
Subjt:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

Q9M0B7 Tetraspanin-91.1e-5942.97Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        R SN++VGI+N     + +  +   I+  ++   + C++ +  P++ LG+FL+++++ G+VGS CR+  LL+ YL V+F LI+ ++ FTIFA +VT+KG 
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLG--NNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        G T+ GK YKEYRL  YS+WLQ+ V NAK+W+ IRSCL ++K C +L     N  V D FYK++L+  +SGCCKP ++C F +  +T W        GT 
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLG--NNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
           DC+ W NE+  LCY C +CK G L N++  W+  AI+N   L  + +VY +GCCA RNNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

Q9SUD4 Tetraspanin-78.1e-6344.62Show/hide
Query:  SNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGVGR
        SN ++GI+N  T  + +  + A I+   +   ++C++ +  P+++LGIFL+ +S+ GLVG+ CR++ LL++YL  +FLLI+    FTIFA  VTN+G G 
Subjt:  SNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGVGR

Query:  TVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVR-DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAEG
         +S +GYKEY + DYSNWLQK V NAKNW+ IRSCL+ + VC +       +  ++FYK NL+ +QSGCCKP ++C F + N T WT       G     
Subjt:  TVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVR-DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAEG

Query:  DCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        DC  W N+  TLCY C++CK G+L NI+  W+  A +N   L F+ IVY +GCCA RNN+
Subjt:  DCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

Arabidopsis top hitse value%identityAlignment
AT1G18520.1 tetraspanin113.1e-7351.15Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        R+SN +VG+ N   + VG  AIG SIY  +  G +DC+  I+ PLL  G+ L ++SLLG++GS  + N  +  YL +LF  IV ++ F+IF   VTNKG 
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA
        GR VSG+GYKEYR  D+S WL  + V  K W  IRSCL +A VC+ L +     + D FY KNLSPIQSGCCKPPS+C FEF+NATFW  P       A 
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNN-PIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAA

Query:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
         GDC  WSN Q  LC+ C++CK GVLANIR++WRN  + N C+L  +  VY  GCCA RNN+
Subjt:  EGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

AT2G23810.1 tetraspanin88.3e-7147.73Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        R SN +VGI+N     + +  +   I+   + G ++C++ +  P++ LG+FL+V+++ GL+GS CR+  LL++YL V+FLLI+ +   T+FA +VTNKG 
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGN---NNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGT
        G  + GKGYKEY+LGDYS WLQK V N KNW++IRSCLV++KVC  L     N P+  + FYK++L+ +QSGCCKP  ECGFE+ N T WT       GT
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGN---NNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGT

Query:  AAEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
            DC+ W N +E LC+ C SCK G+L N++  W+  AI+N   L F+ IVY +GCCA RNNK
Subjt:  AAEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

AT4G28050.1 tetraspanin75.8e-6444.62Show/hide
Query:  SNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGVGR
        SN ++GI+N  T  + +  + A I+   +   ++C++ +  P+++LGIFL+ +S+ GLVG+ CR++ LL++YL  +FLLI+    FTIFA  VTN+G G 
Subjt:  SNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGVGR

Query:  TVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVR-DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAEG
         +S +GYKEY + DYSNWLQK V NAKNW+ IRSCL+ + VC +       +  ++FYK NL+ +QSGCCKP ++C F + N T WT       G     
Subjt:  TVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVR-DEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAEG

Query:  DCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        DC  W N+  TLCY C++CK G+L NI+  W+  A +N   L F+ IVY +GCCA RNN+
Subjt:  DCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

AT4G30430.1 tetraspanin97.8e-6142.97Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        R SN++VGI+N     + +  +   I+  ++   + C++ +  P++ LG+FL+++++ G+VGS CR+  LL+ YL V+F LI+ ++ FTIFA +VT+KG 
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLG--NNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA
        G T+ GK YKEYRL  YS+WLQ+ V NAK+W+ IRSCL ++K C +L     N  V D FYK++L+  +SGCCKP ++C F +  +T W        GT 
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLG--NNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTA

Query:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
           DC+ W NE+  LCY C +CK G L N++  W+  AI+N   L  + +VY +GCCA RNNK
Subjt:  AEGDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK

AT5G23030.1 tetraspanin121.4e-5741.76Show/hide
Query:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV
        RLSN  V   N     +GL A+  S+Y  ++ G S CQ+ +QNPL++    L  +S LGL+ +    + ++ +YL  LFL I+ ++  ++F  LVTN   
Subjt:  RLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGV

Query:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAE
        G+ +SG+G    + GDY NW+  + +  KNW+ I  CL D++VC+  G  +     +F  K+LS +Q GCC+PP ECGFE KNAT+WTVP +    TA  
Subjt:  GRTVSGKGYKEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAE

Query:  GDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK
        GDC+ WSN Q  LCY C+SCK GVL  IRK WR   ++N  ++  V  +Y  GCC  +NN+
Subjt:  GDCRKWSNEQETLCYGCDSCKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTCGCCTGAGCAACACCGTGGTCGGAATCATAAACTGCTGCACTCTCGCCGTCGGCCTAATCGCAATCGGCGCCTCCATCTACTCCCGCATCCGCGGCGGCGGCTCCGA
TTGCCAGAAGGTCATTCAAAACCCTCTTCTAATACTCGGAATCTTCCTCGTCGTCATGTCGCTGCTAGGGCTCGTAGGATCCTTCTGCCGACTCAATTCCCTACTCTACA
TATACCTGACGGTTCTGTTTCTGTTGATCGTCGGGATAATCGCCTTCACGATATTCGCTCTGTTGGTTACGAATAAAGGCGTCGGAAGGACGGTGTCGGGGAAAGGATAT
AAGGAGTATCGGCTCGGGGATTATTCGAATTGGTTGCAGAAATATGTTGTGAATGCGAAGAATTGGGATGAGATACGGAGTTGTTTGGTTGATGCTAAGGTCTGTGAGAG
TCTAGGTAATAATAACCCTATAGTACGGGATGAGTTTTACAAGAAGAATTTGTCGCCTATTCAGTCCGGGTGCTGTAAGCCGCCGTCGGAGTGTGGATTCGAGTTCAAGA
ATGCGACGTTCTGGACGGTGCCGAAATCGGGGCCGGTGGGTACGGCGGCTGAGGGCGATTGCAGAAAATGGAGCAACGAGCAAGAGACGCTGTGCTACGGGTGCGATTCG
TGCAAAGGAGGAGTGCTGGCGAACATAAGGAAGGAGTGGAGAAATTTCGCCATTCTCAACTGCTGTGTTCTTGCCTTCGTCACTATCGTCTACTGCATCGGCTGCTGCGC
CACAAGGAACAATAAG
mRNA sequenceShow/hide mRNA sequence
CCTCGCCTGAGCAACACCGTGGTCGGAATCATAAACTGCTGCACTCTCGCCGTCGGCCTAATCGCAATCGGCGCCTCCATCTACTCCCGCATCCGCGGCGGCGGCTCCGA
TTGCCAGAAGGTCATTCAAAACCCTCTTCTAATACTCGGAATCTTCCTCGTCGTCATGTCGCTGCTAGGGCTCGTAGGATCCTTCTGCCGACTCAATTCCCTACTCTACA
TATACCTGACGGTTCTGTTTCTGTTGATCGTCGGGATAATCGCCTTCACGATATTCGCTCTGTTGGTTACGAATAAAGGCGTCGGAAGGACGGTGTCGGGGAAAGGATAT
AAGGAGTATCGGCTCGGGGATTATTCGAATTGGTTGCAGAAATATGTTGTGAATGCGAAGAATTGGGATGAGATACGGAGTTGTTTGGTTGATGCTAAGGTCTGTGAGAG
TCTAGGTAATAATAACCCTATAGTACGGGATGAGTTTTACAAGAAGAATTTGTCGCCTATTCAGTCCGGGTGCTGTAAGCCGCCGTCGGAGTGTGGATTCGAGTTCAAGA
ATGCGACGTTCTGGACGGTGCCGAAATCGGGGCCGGTGGGTACGGCGGCTGAGGGCGATTGCAGAAAATGGAGCAACGAGCAAGAGACGCTGTGCTACGGGTGCGATTCG
TGCAAAGGAGGAGTGCTGGCGAACATAAGGAAGGAGTGGAGAAATTTCGCCATTCTCAACTGCTGTGTTCTTGCCTTCGTCACTATCGTCTACTGCATCGGCTGCTGCGC
CACAAGGAACAATAAG
Protein sequenceShow/hide protein sequence
PRLSNTVVGIINCCTLAVGLIAIGASIYSRIRGGGSDCQKVIQNPLLILGIFLVVMSLLGLVGSFCRLNSLLYIYLTVLFLLIVGIIAFTIFALLVTNKGVGRTVSGKGY
KEYRLGDYSNWLQKYVVNAKNWDEIRSCLVDAKVCESLGNNNPIVRDEFYKKNLSPIQSGCCKPPSECGFEFKNATFWTVPKSGPVGTAAEGDCRKWSNEQETLCYGCDS
CKGGVLANIRKEWRNFAILNCCVLAFVTIVYCIGCCATRNNK