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MS002098 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002098
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 13-like
Genome locationscaffold30:2349707..2350033
RNA-Seq ExpressionMS002098
SyntenyMS002098
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3437324.1 hypothetical protein FNV43_RR20077 [Rhamnella rubrinervis]1.2e-1259.46Show/hide
Query:  SSSNRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEKRLVPTGPNPLHH
        +SSNRKL+  K DFT +L+H         RHHRH H RH+   +G   PG ++IDPRYGVEKRLVPTGPNPLHH
Subjt:  SSSNRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEKRLVPTGPNPLHH

KAG8476660.1 hypothetical protein CXB51_029994 [Gossypium anomalum]5.8e-1252.88Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT F+ H       H  HHR+   RH   DN   P P + EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

TYH98617.1 hypothetical protein ES332_A11G009100v1 [Gossypium tomentosum]1.0e-1153.85Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT FL H       H  HHR    RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

XP_012487702.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 13 [Gossypium raimondii]4.5e-1253.85Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDF  FL H       H  HHR  H RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

XP_016684188.1 CLAVATA3/ESR (CLE)-related protein 13-like [Gossypium hirsutum]1.5e-1254.81Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT FL H       H  HHR  H RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

TrEMBL top hitse value%identityAlignment
A0A1U8J6E2 CLAVATA3/ESR (CLE)-related protein 13-like7.4e-1354.81Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT FL H       H  HHR  H RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

A0A5D2AHI1 Uncharacterized protein7.4e-1354.81Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT FL H       H  HHR  H RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

A0A5D2IHJ9 Uncharacterized protein7.4e-1354.81Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT FL H       H  HHR  H RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

A0A5D2SKK3 Uncharacterized protein7.4e-1354.81Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT FL H       H  HHR  H RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

A0A5J5P538 Uncharacterized protein7.4e-1354.81Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN
        L L LLLLFF          D  N  + +SSNRK++ A KFDFT FL H       H  HHR  H RH   DN   P P   EIDPRYGVEKRLVPTGPN
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPA-KFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSP-PGAAEIDPRYGVEKRLVPTGPN

Query:  PLHH
        PLHH
Subjt:  PLHH

SwissProt top hitse value%identityAlignment
A2X462 Protein FON2 SPARE18.2e-0958.93Show/hide
Query:  RRHHRHRHARHSHHDNGDS------PPGAA----EIDPRYGVEKRLVPTGPNPLHH
        R HH HRH  H HH   D       PP AA    E+DPR+GV+KRLVPTGPNPLHH
Subjt:  RRHHRHRHARHSHHDNGDS------PPGAA----EIDPRYGVEKRLVPTGPNPLHH

Q29PU4 CLAVATA3/ESR (CLE)-related protein 127.7e-0746.48Show/hide
Query:  NRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEKRLVPTGPNPLHH
        +RK++  +FDFT F              H   ++RH+H  +G+   G  EIDPRYGVEKR VP+GPNPLHH
Subjt:  NRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEKRLVPTGPNPLHH

Q4PSX1 CLAVATA3/ESR (CLE)-related protein 102.5e-0577.78Show/hide
Query:  PPGAAEIDPRYGVEKRLVPTGPNPLHH
        PP   EID RYGVEKRLVP+GPNPLH+
Subjt:  PPGAAEIDPRYGVEKRLVPTGPNPLHH

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 133.1e-0841.07Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKK----------SSSNRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEK
        LL + LL+F S  LF   S    N                  R L    FDFT FL+ L  RR +HR+                 P G +EIDPRYGVEK
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKK----------SSSNRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEK

Query:  RLVPTGPNPLHH
        RLVP+GPNPLHH
Subjt:  RLVPTGPNPLHH

Q6Z6T2 Inactive protein FON2 SPARE18.2e-0958.93Show/hide
Query:  RRHHRHRHARHSHHDNGDS------PPGAA----EIDPRYGVEKRLVPTGPNPLHH
        R HH HRH  H HH   D       PP AA    E+DPR+GV+KRLVPTGPNPLHH
Subjt:  RRHHRHRHARHSHHDNGDS------PPGAA----EIDPRYGVEKRLVPTGPNPLHH

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 92.3e-0678.57Show/hide
Query:  SPPGAAEIDPRYGVEKRLVPTGPNPLHH
        SPP   EIDPRYGV+KRLVP+GPNPLH+
Subjt:  SPPGAAEIDPRYGVEKRLVPTGPNPLHH

AT1G68795.1 CLAVATA3/ESR-RELATED 125.5e-0846.48Show/hide
Query:  NRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEKRLVPTGPNPLHH
        +RK++  +FDFT F              H   ++RH+H  +G+   G  EIDPRYGVEKR VP+GPNPLHH
Subjt:  NRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEKRLVPTGPNPLHH

AT1G69320.1 CLAVATA3/ESR-RELATED 101.8e-0677.78Show/hide
Query:  PPGAAEIDPRYGVEKRLVPTGPNPLHH
        PP   EID RYGVEKRLVP+GPNPLH+
Subjt:  PPGAAEIDPRYGVEKRLVPTGPNPLHH

AT1G73965.1 CLAVATA3/ESR-RELATED 132.2e-0941.07Show/hide
Query:  LLLLLLLLFFSAMLFHGVSLDGYNTTKK----------SSSNRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEK
        LL + LL+F S  LF   S    N                  R L    FDFT FL+ L  RR +HR+                 P G +EIDPRYGVEK
Subjt:  LLLLLLLLFFSAMLFHGVSLDGYNTTKK----------SSSNRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEK

Query:  RLVPTGPNPLHH
        RLVP+GPNPLHH
Subjt:  RLVPTGPNPLHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCCTTGCAATTTGATTCCCCTTCTTCTTCTTCTTCTTCTTCTTTTCTTTTCAGCTATGCTCTTTCATGGAGTTTCCCTTGATGGATATAACACCACCAAAAAGTCATC
TTCTAACAGAAAACTCATGCCTGCCAAATTTGACTTCACCACCTTTCTTCAGCATCTGCATCAACGGCGGCAAGATCATCGCCGCCACCACCGACATCGCCACGCCCGCC
ACAGCCACCACGACAACGGTGATTCACCCCCGGGTGCGGCGGAGATTGATCCTCGGTACGGCGTCGAAAAACGCCTCGTCCCAACTGGTCCAAACCCATTGCACCAT
mRNA sequenceShow/hide mRNA sequence
AAGCCTTGCAATTTGATTCCCCTTCTTCTTCTTCTTCTTCTTCTTTTCTTTTCAGCTATGCTCTTTCATGGAGTTTCCCTTGATGGATATAACACCACCAAAAAGTCATC
TTCTAACAGAAAACTCATGCCTGCCAAATTTGACTTCACCACCTTTCTTCAGCATCTGCATCAACGGCGGCAAGATCATCGCCGCCACCACCGACATCGCCACGCCCGCC
ACAGCCACCACGACAACGGTGATTCACCCCCGGGTGCGGCGGAGATTGATCCTCGGTACGGCGTCGAAAAACGCCTCGTCCCAACTGGTCCAAACCCATTGCACCAT
Protein sequenceShow/hide protein sequence
KPCNLIPLLLLLLLLFFSAMLFHGVSLDGYNTTKKSSSNRKLMPAKFDFTTFLQHLHQRRQDHRRHHRHRHARHSHHDNGDSPPGAAEIDPRYGVEKRLVPTGPNPLHH