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MS002107 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002107
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationscaffold30:2424572..2424986
RNA-Seq ExpressionMS002107
SyntenyMS002107
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058058.1 ATP-dependent helicase/nuclease subunit A isoform 1 [Cucumis melo var. makuwa]9.8e-2087.3Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        MVG+ RKWAY RII GTIVGGVLGFYVMHRVEVGYKEK+KERL+QYE ELKKKE+MKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
KGN63809.2 hypothetical protein Csa_013239 [Cucumis sativus]5.2e-2188.89Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        MVG+ RKWAY+RIITGT+VGGVLGFYVMHRVEVGYKEK+KERL+QYE ELKKKEQMKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
XP_004138234.1 uncharacterized protein LOC101217575 [Cucumis sativus]5.2e-2188.89Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        MVG+ RKWAY+RIITGT+VGGVLGFYVMHRVEVGYKEK+KERL+QYE ELKKKEQMKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
XP_022134690.1 uncharacterized protein LOC111006898 [Momordica charantia]3.8e-24100Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
XP_038882309.1 uncharacterized protein LOC120073547 [Benincasa hispida]7.5e-2085.71Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        M+G+ RKWAY+RII GTIVGGVLGFYVMHRVE+GYKEK+KERL+QYE ELKKKEQMKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
TrEMBL top hitse value%identityAlignment
A0A1S3BW37 uncharacterized protein LOC1034941134.7e-2087.3Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        MVG+ RKWAY RII GTIVGGVLGFYVMHRVEVGYKEK+KERL+QYE ELKKKE+MKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 14.7e-2087.3Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        MVG+ RKWAY RII GTIVGGVLGFYVMHRVEVGYKEK+KERL+QYE ELKKKE+MKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
A0A6J1BYI4 uncharacterized protein LOC1110068981.9e-24100Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
        MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL
A0A6J1E2A1 uncharacterized protein LOC1114301284.0e-1987.1Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDS
        M+G+ R WAY+RII GTIVGGVLGFYVMHRVEVGYKEK+KERLRQYE ELKKKEQMKELEDS
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDS
A0A6J1JJ44 uncharacterized protein LOC1114849055.2e-1987.1Show/hide
Query:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDS
        M+G+ R WAY+RII GTIVGGVLGFYVMHRVEVGYKEK+KERLRQYE ELKKKEQMKELEDS
Subjt:  MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein1.5e-1053.85Show/hide
Query:  WAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKEL
        W Y RII GT++GG LGFYVMHR+EV YK +++E L QYE++++K+++ + L
Subjt:  WAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGCAATTATCGTAAATGGGCTTATGTCAGGATCATCACCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTACGTAATGCACCGCGTTGAAGTTGGCTATAAGGA
GAAGGTGAAAGAGAGGTTAAGACAATATGAAGAAGAACTGAAGAAGAAGGAGCAGATGAAAGAACTTGAAGATTCGCTA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGCAATTATCGTAAATGGGCTTATGTCAGGATCATCACCGGCACCATCGTCGGCGGCGTTCTCGGCTTCTACGTAATGCACCGCGTTGAAGTTGGCTATAAGGA
GAAGGTGAAAGAGAGGTTAAGACAATATGAAGAAGAACTGAAGAAGAAGGAGCAGATGAAAGAACTTGAAGATTCGCTA
Protein sequenceShow/hide protein sequence
MVGNYRKWAYVRIITGTIVGGVLGFYVMHRVEVGYKEKVKERLRQYEEELKKKEQMKELEDSL