CuGenDBv2

Gene ID	MS002113
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AT-rich interactive domain protein
Genome location	scaffold30:2457673..2458659
RNA-Seq Expression	MS002113
Synteny	MS002113
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6589553.1 hypothetical protein SDJN03_14976, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-87

86.63

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN
        MALTITNGGA  G+GGGILYRTST+ PSNQ L RRNALF PS EARTLHVV +KKSSFR GR DSKNRRSST+TKEQEE +EEERNR AEI       EN
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN

Query:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS
        AGVAFDVDENLPELPGLQPDFWEG QWDPLGFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPEASNPDVFESNPTEVAPS
Subjt:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_022134616.1 uncharacterized protein LOC111006843 [Momordica charantia]

3.2e-104

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNRTAEIERDGPNVENA
        MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNR AEIERDGPNVENA
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNRTAEIERDGPNVENA

Query:  GVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL
        GVAFDVDENLPELPGLQPDFWEGP+WDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL
Subjt:  GVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

XP_022987248.1 uncharacterized protein LOC111484859 [Cucurbita maxima]

4.1e-88

87.62

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN
        MALTITNGGA  G+GGGILYRTST+ PSNQFL RRNALF PS EARTLHVV +KKSSFR GR DSKNRRSST+TKEQEE EEEERNR AEI       EN
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN

Query:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS
        AGVAFDVDENLPELPGLQPDFWEG QWDPLGFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPEASNPDVFESNPTEVAPS
Subjt:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_023515371.1 uncharacterized protein LOC111779544 [Cucurbita pepo subsp. pepo]

1.2e-87

87.13

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN
        MALTITNGGAA G+GGGILYRTST+ PSNQFL RRNALF PS EARTLHVV +KKSSFR GR DSKNRRSST TKEQEE +E+ERNR AEI       EN
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN

Query:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS
        AGVAFDVDENLPELPGLQPDFWEG QWDPLGFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPEASNPDVFESNPTEVAPS
Subjt:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_038876354.1 uncharacterized protein LOC120068690 [Benincasa hispida]

6.0e-95

91.54

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNRTAEIERDGPNVENA
        MALTITNGGA GG+GGGILYR+ST+ PSNQFLLRRNALFPPS EARTL+VVQAKKSSFRTGRFD KNRRSSTTT  QE+EEEERNRTAEI RD PNVENA
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNRTAEIERDGPNVENA

Query:  GVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL
        GVAFDVDENLPELPGLQPDFWEGPQWD LGFFLEYLWAFGI FALIACGIAVTTYNEGATDFKDTPAYKESVQT+E+LEEPEASNPDVFESNPTEVAPSL
Subjt:  GVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BW57 uncharacterized protein LOC103494120

2.1e-85

86.21

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Query:  MALTITNGGAAGGSGGGILYRTSTKI-PSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQE-EEEEERNRTAEIERDGPNVE
        M LTITNGGA  G+ GGILYRT T+  PSN FL RRNALF PS EARTLHVVQAKKSSFRTGRFDSKNRRSSTT KEQ+ EEEEERNRTA IE   P VE
Subjt:  MALTITNGGAAGGSGGGILYRTSTKI-PSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQE-EEEEERNRTAEIERDGPNVE

Query:  NAGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAP
        NAGV FDVDENLPELPGLQPDFWEGPQWD LGFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQT+E+L EPEASNPDVFESNPTEVAP
Subjt:  NAGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAP

Query:  SLE
        SLE
Subjt:  SLE

A0A5A7UV79 Putative AT-rich interactive domain-containing protein 5A

2.1e-85

86.21

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Query:  MALTITNGGAAGGSGGGILYRTSTKI-PSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQE-EEEEERNRTAEIERDGPNVE
        M LTITNGGA  G+ GGILYRT T+  PSN FL RRNALF PS EARTLHVVQAKKSSFRTGRFDSKNRRSSTT KEQ+ EEEEERNRTA IE   P VE
Subjt:  MALTITNGGAAGGSGGGILYRTSTKI-PSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQE-EEEEERNRTAEIERDGPNVE

Query:  NAGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAP
        NAGV FDVDENLPELPGLQPDFWEGPQWD LGFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQT+E+L EPEASNPDVFESNPTEVAP
Subjt:  NAGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAP

Query:  SLE
        SLE
Subjt:  SLE

A0A6J1BYA9 uncharacterized protein LOC111006843

1.5e-104

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNRTAEIERDGPNVENA
        MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNR AEIERDGPNVENA
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNRTAEIERDGPNVENA

Query:  GVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL
        GVAFDVDENLPELPGLQPDFWEGP+WDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL
Subjt:  GVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

A0A6J1E7K1 uncharacterized protein LOC111430129

8.4e-87

86.14

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN
        MALTITNGGA  G+GGGILYRTST+ PSNQ L RRNALF PS EARTLHVV +KKSSFR GR DSKNRRSST+TKEQEE +EEE+NR AEI       EN
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN

Query:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS
        AGVAFDVDENLPELPGLQPDFWEG QWDPLGFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPEASNPDVFESNPTEVAPS
Subjt:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

A0A6J1JIX0 uncharacterized protein LOC111484859

2.0e-88

87.62

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN
        MALTITNGGA  G+GGGILYRTST+ PSNQFL RRNALF PS EARTLHVV +KKSSFR GR DSKNRRSST+TKEQEE EEEERNR AEI       EN
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEE-EEEERNRTAEIERDGPNVEN

Query:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS
        AGVAFDVDENLPELPGLQPDFWEG QWDPLGFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPEASNPDVFESNPTEVAPS
Subjt:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G73885.1 unknown protein

4.6e-29

42.57

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Query:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERN-RTAEIERDGPNVEN
        MALT+    ++GG G  I     T    N F   R   FP  N +RT    +  +       FD +N  S     +++ +    N R     +D P    
Subjt:  MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERN-RTAEIERDGPNVEN

Query:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASN-PDVFESNPTEVAP
                  + +LPGL+PD +EG +WD LGFF++YLWAFGI FALI+ G+A  TYNEGATDFK+TP YKE++Q+++LL+E E+SN  DVFESNPTEVAP
Subjt:  AGVAFDVDENLPELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASN-PDVFESNPTEVAP

Query:  SL
        ++
Subjt:  SL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTCTGACCATAACCAACGGCGGCGCCGCCGGAGGCAGCGGTGGTGGGATTCTCTACAGAACCTCCACCAAAATCCCTTCCAACCAATTCCTTCTCCGTCGCAACGC
GCTCTTCCCGCCGTCCAATGAAGCCCGCACCCTCCACGTCGTTCAGGCCAAGAAATCCTCATTCCGAACCGGGCGATTCGACAGTAAGAACCGAAGGAGCTCGACGACGA
CCAAGGAACAGGAGGAGGAAGAAGAAGAACGAAATCGGACGGCGGAAATTGAAAGGGATGGTCCAAACGTTGAAAATGCCGGCGTAGCGTTCGATGTGGATGAGAATTTG
CCGGAACTTCCAGGGCTTCAGCCTGATTTCTGGGAGGGTCCGCAGTGGGATCCCCTCGGCTTCTTCCTGGAATATTTGTGGGCTTTTGGCATCGCTTTCGCGCTAATTGC
TTGCGGGATTGCTGTTACTACATATAACGAAGGAGCAACTGATTTTAAGGATACGCCTGCATACAAAGAATCAGTTCAAACTCAAGAGCTATTAGAAGAGCCCGAGGCAT
CGAACCCAGATGTCTTTGAATCTAATCCAACTGAGGTGGCTCCTAGTTTGGAA

mRNA sequence

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Protein sequence

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MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRTGRFDSKNRRSSTTTKEQEEEEEERNRTAEIERDGPNVENAGVAFDVDENL
PELPGLQPDFWEGPQWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEEPEASNPDVFESNPTEVAPSLE

MS002113 (gene) of Bitter gourd (TR) v1 genome