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MS002115 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002115
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:2471343..2471759
RNA-Seq ExpressionMS002115
SyntenyMS002115
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0LPJ7 Uncharacterized protein1.6e-1553.96Show/hide
Query:  SPAVA-LHRHRYIQIQPQPIFLHHFRPLPTAFHPRRRQRR-----LLLLLLLLLLFPIRRRSD---QTLRQCPLPPSEILHRFLHPPQYHKKLLHLLVRR
        S AVA L+   YIQIQ QPIFLHHF PLPT+ H RRR+ R     LLL LLLL L  I R S+   QTLRQ P   S+IL   LHPP+YH +LL LLV  
Subjt:  SPAVA-LHRHRYIQIQPQPIFLHHFRPLPTAFHPRRRQRR-----LLLLLLLLLLFPIRRRSD---QTLRQCPLPPSEILHRFLHPPQYHKKLLHLLVRR

Query:  LLRRRRRRRRRLLLVLCLLYTNSVAVFRYPPSPFFPSHF
        LLR R RR    ++V   L+ N  +VF  P S  F SHF
Subjt:  LLRRRRRRRRRLLLVLCLLYTNSVAVFRYPPSPFFPSHF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGACCGGAAAATCTCCCTCGCACGTCTCACCCGCCGTCGCTCTCCACCGCCACCGCTATATTCAAATCCAACCTCAACCCATTTTCCTCCACCACTTCCGTCCCCTTCC
CACGGCGTTTCATCCCCGCCGGCGACAGCGCCGCCTCCTCCTTCTCCTCCTCCTCCTCCTTCTCTTCCCGATCCGCCGCCGCTCCGATCAAACTCTCCGTCAATGCCCTC
TTCCTCCCTCCGAAATACTCCACCGCTTCCTTCATCCGCCGCAGTATCACAAAAAACTCCTCCACCTCCTCGTCCGTCGGCTCCTCCGCCGTCGCCGTCGCCGCCGCCGC
CGCTTGCTCCTCGTTCTTTGTCTTCTTTACACCAATTCCGTCGCTGTTTTCCGGTACCCCCCTTCTCCTTTTTTCCCTTCCCATTTC
mRNA sequenceShow/hide mRNA sequence
CTGACCGGAAAATCTCCCTCGCACGTCTCACCCGCCGTCGCTCTCCACCGCCACCGCTATATTCAAATCCAACCTCAACCCATTTTCCTCCACCACTTCCGTCCCCTTCC
CACGGCGTTTCATCCCCGCCGGCGACAGCGCCGCCTCCTCCTTCTCCTCCTCCTCCTCCTTCTCTTCCCGATCCGCCGCCGCTCCGATCAAACTCTCCGTCAATGCCCTC
TTCCTCCCTCCGAAATACTCCACCGCTTCCTTCATCCGCCGCAGTATCACAAAAAACTCCTCCACCTCCTCGTCCGTCGGCTCCTCCGCCGTCGCCGTCGCCGCCGCCGC
CGCTTGCTCCTCGTTCTTTGTCTTCTTTACACCAATTCCGTCGCTGTTTTCCGGTACCCCCCTTCTCCTTTTTTCCCTTCCCATTTC
Protein sequenceShow/hide protein sequence
LTGKSPSHVSPAVALHRHRYIQIQPQPIFLHHFRPLPTAFHPRRRQRRLLLLLLLLLLFPIRRRSDQTLRQCPLPPSEILHRFLHPPQYHKKLLHLLVRRLLRRRRRRRR
RLLLVLCLLYTNSVAVFRYPPSPFFPSHF