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MS002116 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002116
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:2471373..2471756
RNA-Seq ExpressionMS002116
SyntenyMS002116
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058070.1 hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa]2.0e-1957.14Show/hide
Query:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA
        MG+EKR+R + E+   I  KKT+N++  A+ A   AEEPTDEEVEEF++ILRRMK+  EYFG  +  LT+SL   + AAA+++EK+EEE+    AA +PA
Subjt:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA

Query:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG
           +RGK   EVVEENGLR LDLNIAVAV+SDG
Subjt:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG

KAE8652459.1 hypothetical protein Csa_013196 [Cucumis sativus]3.5e-2458.09Show/hide
Query:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEEKEE-----AA
        MG+EKR+R + EN   I  KKTKN++      T  AEEPTDEEVEEF++ILRRMK+  EYFG  +  L +SL   + AAAD++EK+EEEE+E+     AA
Subjt:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEEKEE-----AA

Query:  LSPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDGG
         SPA + RRGKG EVVEENGLRLDLNIA+AV+   G
Subjt:  LSPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDGG

KAG6589551.1 hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2260.94Show/hide
Query:  RRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEE---EKEEAALSPAGMK
        +R+   EN      KKTKN+E  AAA     +EPTDEEVEEF+ ILRRMK A EYFG  K  LT+SL     AAADREEKEEE+   ++ EA    A MK
Subjt:  RRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEE---EKEEAALSPAGMK

Query:  RRGKGTEVVEENGLRLDLNIAVAVESDG
        + GKG EVV ENGLRLDLNIAVAVESDG
Subjt:  RRGKGTEVVEENGLRLDLNIAVAVESDG

RQO93794.1 hypothetical protein POPTR_T172014 [Populus trichocarpa]3.3e-0640.3Show/hide
Query:  GREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEE----PTDEEVEEFFVILRRMKEAVEYFGGRK----RALTESLIGAAADREEKEEEEEKEEAAL
        G+EKRRRG  E+  G   K    E +      AT +E     T+EEVEEFF ILRRM+EA +YFG       RA  E+ +    D     EEE      +
Subjt:  GREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEE----PTDEEVEEFFVILRRMKEAVEYFGGRK----RALTESLIGAAADREEKEEEEEKEEAAL

Query:  SPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDG
          +G +      E  EENG+ LDLN    VESDG
Subjt:  SPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDG

TYK28420.1 hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa]2.0e-1957.14Show/hide
Query:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA
        MG+EKR+R + E+   I  KKT+N++  A+ A   AEEPTDEEVEEF++ILRRMK+  EYFG  +  LT+SL   + AAA+++EK+EEE+    AA +PA
Subjt:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA

Query:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG
           +RGK   EVVEENGLR LDLNIAVAV+SDG
Subjt:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG

TrEMBL top hitse value%identityAlignment
A0A2N9GJM2 Uncharacterized protein3.9e-0541.13Show/hide
Query:  MGREKRRR-GVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYF-----GGRKRALTESLIGAAADREEKEEEEEKEEAALS
        M  EKR+R G  E  +G  +KK + E             P++EEVEEFF ILRRMK AV+YF     G   RA   +  G   D EE+EEEE+K +  + 
Subjt:  MGREKRRR-GVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYF-----GGRKRALTESLIGAAADREEKEEEEEKEEAALS

Query:  PAGMKRRGKGTEVVEENGLRLDLN
            K++ KG    EE+G+ LDLN
Subjt:  PAGMKRRGKGTEVVEENGLRLDLN

A0A3N7FGA1 Uncharacterized protein1.6e-0640.3Show/hide
Query:  GREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEE----PTDEEVEEFFVILRRMKEAVEYFGGRK----RALTESLIGAAADREEKEEEEEKEEAAL
        G+EKRRRG  E+  G   K    E +      AT +E     T+EEVEEFF ILRRM+EA +YFG       RA  E+ +    D     EEE      +
Subjt:  GREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEE----PTDEEVEEFFVILRRMKEAVEYFGGRK----RALTESLIGAAADREEKEEEEEKEEAAL

Query:  SPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDG
          +G +      E  EENG+ LDLN    VESDG
Subjt:  SPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDG

A0A3N7G0A2 Uncharacterized protein2.1e-0640.3Show/hide
Query:  GREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEE----PTDEEVEEFFVILRRMKEAVEYFGGRK----RALTESLIGAAADREEKEEEEEKEEAAL
        G+EKR+RG  E+  G   K    E +      AT EE     T+EEVEEFF ILRRM+EA +YFG       RA  E+ +    D     E    EE  +
Subjt:  GREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEE----PTDEEVEEFFVILRRMKEAVEYFGGRK----RALTESLIGAAADREEKEEEEEKEEAAL

Query:  SPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDG
          +G +      E  EENG+ LDLN    VESDG
Subjt:  SPAGMKRRGKGTEVVEENGLRLDLNIAVAVESDG

A0A5A7USD1 Uncharacterized protein9.6e-2057.14Show/hide
Query:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA
        MG+EKR+R + E+   I  KKT+N++  A+ A   AEEPTDEEVEEF++ILRRMK+  EYFG  +  LT+SL   + AAA+++EK+EEE+    AA +PA
Subjt:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA

Query:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG
           +RGK   EVVEENGLR LDLNIAVAV+SDG
Subjt:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG

A0A5D3DYW7 Uncharacterized protein9.6e-2057.14Show/hide
Query:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA
        MG+EKR+R + E+   I  KKT+N++  A+ A   AEEPTDEEVEEF++ILRRMK+  EYFG  +  LT+SL   + AAA+++EK+EEE+    AA +PA
Subjt:  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL---IGAAADREEKEEEEE-KEEAALSPA

Query:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG
           +RGK   EVVEENGLR LDLNIAVAV+SDG
Subjt:  GMKRRGKG-TEVVEENGLR-LDLNIAVAVESDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAAGCGGCGGCGGCGGCGACGGCGACGGCGGA
GGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCG
GAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGAAGGAGGAGGCGGCGCTGTCGCCGGCGGGGATGAAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAA
AATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTGGAGAGCGACGGCGGG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAAGCGGCGGCGGCGGCGACGGCGACGGCGGA
GGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCG
GAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGAAGGAGGAGGCGGCGCTGTCGCCGGCGGGGATGAAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAA
AATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTGGAGAGCGACGGCGGG
Protein sequenceShow/hide protein sequence
MGREKRRRGVPENSDGIGVKKTKNEEQAAAAATATAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESLIGAAADREEKEEEEEKEEAALSPAGMKRRGKGTEVVEE
NGLRLDLNIAVAVESDGG