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MS002137 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002137
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionocticosapeptide/Phox/Bem1p (PB1) domain-containing protein
Genome locationscaffold30:2637128..2637442
RNA-Seq ExpressionMS002137
SyntenyMS002137
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587664.1 hypothetical protein SDJN03_16229, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5197.14Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSL+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLF+F
Subjt:  RLFLF

XP_004137546.1 uncharacterized protein LOC101210340 [Cucumis sativus]7.3e-5298.1Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSL+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLFLF
Subjt:  RLFLF

XP_022134583.1 uncharacterized protein LOC111006815 [Momordica charantia]1.5e-52100Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLFLF
Subjt:  RLFLF

XP_022925527.1 uncharacterized protein LOC111432842 [Cucurbita moschata]1.2e-5197.14Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSL+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLF+F
Subjt:  RLFLF

XP_022973326.1 uncharacterized protein LOC111471889 [Cucurbita maxima]1.2e-5197.14Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSL+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLF+F
Subjt:  RLFLF

TrEMBL top hitse value%identityAlignment
A0A0A0LPU6 PB1 domain-containing protein3.5e-5298.1Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSL+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLFLF
Subjt:  RLFLF

A0A5D3DXZ5 Ataxin-2-like protein3.9e-5196.19Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHS+L+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASP KPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLFLF
Subjt:  RLFLF

A0A6J1C2E1 uncharacterized protein LOC1110068157.1e-53100Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLFLF
Subjt:  RLFLF

A0A6J1EBX8 uncharacterized protein LOC1114328426.0e-5297.14Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSL+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLF+F
Subjt:  RLFLF

A0A6J1I8C4 uncharacterized protein LOC1114718896.0e-5297.14Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSL+DLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRIT+ASPLKPLRI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLF+F
Subjt:  RLFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25300.1 Octicosapeptide/Phox/Bem1p family protein1.1e-2454.29Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI
        KL L+CSYGG I+P P +KSL Y+GG+TR+V+V R  S  D    LS  LL+GR F+LKY+LP  D DSLI+++ +EDL+NMI EYD   +       RI
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRI

Query:  RLFLF
        RLFLF
Subjt:  RLFLF

AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein5.6e-4277.36Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDR-ITIASPLKPLR
        KLR MCSYGGHI+PRPHDKSLCY+GGDTRIVVVDR+SSL  L  RLS TLL+GR FTLKYQLP EDLDSLIS+ TDEDL+NMIEEYDR I+ ++  KP R
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDR-ITIASPLKPLR

Query:  IRLFLF
        +RLFLF
Subjt:  IRLFLF

AT3G18230.1 Octicosapeptide/Phox/Bem1p family protein3.2e-3772.64Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDR-ITIASPLKPLR
        KLRLMCS+GGHI+PRPHDKSL Y GG+TRIVVVDR +SL+ L  RLS  LLNGR FTLKYQLP EDLDSL++I TDEDLENMIEEYDR  + A+     R
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDR-ITIASPLKPLR

Query:  IRLFLF
        +RLFLF
Subjt:  IRLFLF

AT4G05150.1 Octicosapeptide/Phox/Bem1p family protein1.3e-2752.83Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRP-FTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLR
        ++R MC++GG I+PRP D  LCYVGGD R+V V RH++ A L  +L++  L+G+   ++KYQLP+EDLD+LIS++TDED+ENM++EYDR+      +  R
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRP-FTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLR

Query:  IRLFLF
        +RLFLF
Subjt:  IRLFLF

AT5G09620.1 Octicosapeptide/Phox/Bem1p family protein8.1e-2554.63Show/hide
Query:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLL---NGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKP
        K++LMCSYGG I PRPHD  L YV GDT+I+ VDR      L  +LS       +G   + KYQLP EDLD+LIS+  DEDLE+M+ EYDR+   S  KP
Subjt:  KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLL---NGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKP

Query:  LRIRLFLF
         R+RLFLF
Subjt:  LRIRLFLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCTCCGCCTCATGTGCAGCTATGGCGGCCACATTATCCCCCGCCCCCACGACAAATCCCTCTGCTACGTCGGCGGAGACACCCGCATTGTCGTCGTCGATCGCCATTC
CTCCCTCGCCGACCTCTGCATGCGCCTCTCCCGAACCCTCCTCAACGGCCGGCCATTCACCCTCAAGTACCAGCTCCCTCACGAAGATCTCGATTCCCTCATCTCCATTG
CGACGGATGAAGATCTCGAGAACATGATCGAAGAGTACGACCGAATCACCATCGCTTCACCCCTGAAGCCTTTACGCATCCGCCTCTTCCTCTTC
mRNA sequenceShow/hide mRNA sequence
AAGCTCCGCCTCATGTGCAGCTATGGCGGCCACATTATCCCCCGCCCCCACGACAAATCCCTCTGCTACGTCGGCGGAGACACCCGCATTGTCGTCGTCGATCGCCATTC
CTCCCTCGCCGACCTCTGCATGCGCCTCTCCCGAACCCTCCTCAACGGCCGGCCATTCACCCTCAAGTACCAGCTCCCTCACGAAGATCTCGATTCCCTCATCTCCATTG
CGACGGATGAAGATCTCGAGAACATGATCGAAGAGTACGACCGAATCACCATCGCTTCACCCCTGAAGCCTTTACGCATCCGCCTCTTCCTCTTC
Protein sequenceShow/hide protein sequence
KLRLMCSYGGHIIPRPHDKSLCYVGGDTRIVVVDRHSSLADLCMRLSRTLLNGRPFTLKYQLPHEDLDSLISIATDEDLENMIEEYDRITIASPLKPLRIRLFLF