CuGenDBv2

Gene ID	MS002139
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Stress up-regulated Nod 19 protein
Genome location	scaffold30:2648273..2649754
RNA-Seq Expression	MS002139
Synteny	MS002139
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	IPR011692 - Stress up-regulated Nod 19

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0058108.1 stress up-regulated Nod 19 protein [Cucumis melo var. makuwa]

7.9e-97

67.73

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Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEE+W LNVH IDTRGVEDR+GC +C C LY+V+KD+    L  DYKGG  CCYD+ QC+VREGY GEER LY++Y V+WVDWDD+FV+PV+VY+FDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTW P   DS+GL  Q+H C V YDVE+CSL NKLHG+ NA K SKV+F  D+G+I+YGVAHQHIG I AT    DGRVLCSS PIYG G+EIGNE+GYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYP+LG +VKI+KGE+ +LVS YD +QNHT VMG+F I+VA K+PN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

TYK28458.1 SURNod19 domain-containing protein [Cucumis melo var. makuwa]

3.5e-97

68.13

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Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEE+W LNVH IDTRGVEDR+GC +C C LY+V+KDQ    L  DYKGG  CCYD+ QC+VREGY GEER LY++Y V+WVDWDD+FV+PV+VY+FDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTW P   DS+GL  Q+H C V YDVE+CSL NKLHG+ NA K SKV+F  D+G+I+YGVAHQHIG I AT    DGRVLCSS PIYG G+EIGNE+GYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYP+LG +VKI+KGE+ +LVS YD +QNHT VMG+F I+VA K+PN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

XP_008453444.1 PREDICTED: uncharacterized protein LOC103494150 [Cucumis melo]

7.9e-97

67.73

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Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEE+W LNVH IDTRGVEDR+GC +C C LY+V+KD+    L  DYKGG  CCYD+ QC+VREGY GEER LY++Y V+WVDWDD+FV+PV+VY+FDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTW P   DS+GL  Q+H C V YDVE+CSL NKLHG+ NA K SKV+F  D+G+I+YGVAHQHIG I AT    DGRVLCSS PIYG G+EIGNE+GYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYP+LG +VKI+KGE+ +LVS YD +QNHT VMG+F I+VA K+PN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

XP_022134781.1 uncharacterized protein LOC111006967 [Momordica charantia]

8.3e-147

97.61

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Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHG+ NATKTSKVIFPGDSGYIIYGVAHQHIGGIDAT    DGRVLCSSSPIYGRGNEIGNENGYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

XP_038905678.1 uncharacterized protein LOC120091645 [Benincasa hispida]

1.8e-101

71.31

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Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEE+W LNVHVIDTRGVEDR+GC +C C LYNV KD+    L+ DYKGG  CCYD  QC+VREGY+GEER LYV+Y VKWVDWDDDFV+PV+VY+FD T
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTW P L DSTG   QQH C V YDVE+CSL +KL GE NA K SKV+F  D+G+++YGVAHQHIGGI AT    DGRVLCSSSPIYG+G+EIGNE+GYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYPK G +VKINKGE+ TLVS YDP+QNHT VMG+F I+VA K+PN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BVP7 uncharacterized protein LOC103494150

3.8e-97

67.73

Show/hide

Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEE+W LNVH IDTRGVEDR+GC +C C LY+V+KD+    L  DYKGG  CCYD+ QC+VREGY GEER LY++Y V+WVDWDD+FV+PV+VY+FDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTW P   DS+GL  Q+H C V YDVE+CSL NKLHG+ NA K SKV+F  D+G+I+YGVAHQHIG I AT    DGRVLCSS PIYG G+EIGNE+GYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYP+LG +VKI+KGE+ +LVS YD +QNHT VMG+F I+VA K+PN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

A0A5A7USI1 Stress up-regulated Nod 19 protein

3.8e-97

67.73

Show/hide

Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEE+W LNVH IDTRGVEDR+GC +C C LY+V+KD+    L  DYKGG  CCYD+ QC+VREGY GEER LY++Y V+WVDWDD+FV+PV+VY+FDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTW P   DS+GL  Q+H C V YDVE+CSL NKLHG+ NA K SKV+F  D+G+I+YGVAHQHIG I AT    DGRVLCSS PIYG G+EIGNE+GYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYP+LG +VKI+KGE+ +LVS YD +QNHT VMG+F I+VA K+PN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

A0A5D3DYD4 SURNod19 domain-containing protein

1.7e-97

68.13

Show/hide

Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEE+W LNVH IDTRGVEDR+GC +C C LY+V+KDQ    L  DYKGG  CCYD+ QC+VREGY GEER LY++Y V+WVDWDD+FV+PV+VY+FDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTW P   DS+GL  Q+H C V YDVE+CSL NKLHG+ NA K SKV+F  D+G+I+YGVAHQHIG I AT    DGRVLCSS PIYG G+EIGNE+GYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYP+LG +VKI+KGE+ +LVS YD +QNHT VMG+F I+VA K+PN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

A0A6J1BYR4 uncharacterized protein LOC111006967

4.0e-147

97.61

Show/hide

Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
        GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVT

Query:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV
        DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHG+ NATKTSKVIFPGDSGYIIYGVAHQHIGGIDAT    DGRVLCSSSPIYGRGNEIGNENGYV
Subjt:  DTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNENGYV

Query:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
Subjt:  VGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

A0A6J1JLU8 uncharacterized protein LOC111485742

2.4e-91

64.17

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Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYK-GEERKLYVRYRVKWVDWDDDFVVPVEVYIFDV
        GYEE+W LN+H IDTRGVEDR+GC +C  HLYNVTKD+ G  L+ DYKGG  CCYD+T+C++RE Y+ GEER LYVRY VKW+DWDDD V+P++VYIF V
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYK-GEERKLYVRYRVKWVDWDDDFVVPVEVYIFDV

Query:  TDTWNPLLNDSTGL--SDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNEN
        TDTWNPL    TG+  + ++H+CLV Y+VE CS  NK   E  ATK  ++I P  SGY+IYG+AH HIG I +     DGR+LCSSSPIYG G+EIGNE+
Subjt:  TDTWNPLLNDSTGL--SDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNEN

Query:  GYVVGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN
        GYVVGMSTCYP+ G+ VKINKGEM++L+S Y+P+QNH  VMGLF IMVA K+PN
Subjt:  GYVVGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIPN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G61820.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

1.8e-70

51.38

Show/hide

Query:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEE--RKLYVRYRVKWVDWDDDFVVPVEVYIFD
        GYE +W LN+H IDTRGVED+ GC +C C LYNVT D++GR ++  YKGG  CCYD+TQCRV+ G+   E  R LY++Y V+WVDWD   V+P +VYIFD
Subjt:  GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEE--RKLYVRYRVKWVDWDDDFVVPVEVYIFD

Query:  VTDTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNA-TKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNEN
        VTD+W     DS     Q+H C V Y+V+ C    K +G+     K   ++ P D GYI+YGVAHQH GGI       +G  +C+S P YG G+E GNE 
Subjt:  VTDTWNPLLNDSTGLSDQQHHCLVAYDVETCSLANKLHGEYNA-TKTSKVIFPGDSGYIIYGVAHQHIGGIDATF---DGRVLCSSSPIYGRGNEIGNEN

Query:  GYVVGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIP
        GY+VGMS+CYP   + VK++ GE +TL SNY  +  HT VMGLF I+VA ++P
Subjt:  GYVVGMSTCYPKLGNYVKINKGEMVTLVSNYDPSQNHTAVMGLFQIMVAHKIP

Sequences

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CDS sequence

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GGATATGAAGAGAGGTGGAGCCTTAATGTACACGTAATAGACACCAGGGGCGTGGAGGACAGGATGGGGTGTACGGATTGCTGGTGCCATTTGTATAATGTTACGAAGGA
TCAGTTTGGGCGGCCATTGAAAGGGGATTACAAAGGAGGGAAGCTGTGCTGTTATGATCAAACGCAGTGCAGAGTGAGGGAAGGTTATAAAGGAGAGGAGAGGAAGTTGT
ATGTGAGATATAGAGTGAAGTGGGTGGATTGGGATGATGATTTTGTGGTTCCTGTGGAGGTTTATATATTTGATGTCACTGATACTTGGAACCCATTGTTGAATGACTCA
ACAGGACTATCTGATCAACAGCATCACTGCCTTGTCGCGTATGATGTAGAAACTTGCTCTCTCGCGAACAAGCTCCATGGTGAGTACAATGCTACAAAAACATCAAAGGT
AATCTTTCCGGGAGACAGTGGCTACATTATCTATGGAGTGGCTCATCAGCACATTGGTGGGATTGATGCAACCTTTGATGGAAGAGTTTTATGTTCTTCTTCACCAATTT
ATGGAAGAGGAAATGAAATTGGAAACGAAAATGGTTATGTTGTTGGAATGTCTACTTGTTATCCGAAGTTGGGTAATTATGTGAAGATCAATAAAGGAGAAATGGTGACT
CTTGTATCCAACTATGATCCCTCGCAAAACCACACCGCTGTTATGGGTCTCTTCCAAATTATGGTTGCACACAAAATTCCAAAT

mRNA sequence

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Protein sequence

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GYEERWSLNVHVIDTRGVEDRMGCTDCWCHLYNVTKDQFGRPLKGDYKGGKLCCYDQTQCRVREGYKGEERKLYVRYRVKWVDWDDDFVVPVEVYIFDVTDTWNPLLNDS
TGLSDQQHHCLVAYDVETCSLANKLHGEYNATKTSKVIFPGDSGYIIYGVAHQHIGGIDATFDGRVLCSSSPIYGRGNEIGNENGYVVGMSTCYPKLGNYVKINKGEMVT
LVSNYDPSQNHTAVMGLFQIMVAHKIPN

MS002139 (gene) of Bitter gourd (TR) v1 genome