; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002153 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002153
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold30:2800493..2801521
RNA-Seq ExpressionMS002153
SyntenyMS002153
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058133.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]8.6e-5340Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGH PN VSYT LI+GYC VGNV AA+KLFDEMPEND EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT VVMLQ+NCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTI+ GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

TYK28487.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]8.6e-5340Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGH PN VSYT LI+GYC VGNV AA+KLFDEMPEND EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT VVMLQ+NCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTI+ GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

XP_008453476.1 PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Cucumis melo]8.6e-5340Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGH PN VSYT LI+GYC VGNV AA+KLFDEMPEND EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT VVMLQ+NCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTI+ GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

XP_011649150.1 pentatricopeptide repeat-containing protein At3g18020 [Cucumis sativus]1.2e-5139.72Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGHCPN VSYT LI+GYC V NV AA+KLFDEMP N  EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT V MLQTNCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTII+GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

XP_022134613.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g18020 [Momordica charantia]5.0e-7751.9Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLI+GYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDM
                                                       AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDM
Subjt:  -----------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDM

Query:  IICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        +ICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
Subjt:  IICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

TrEMBL top hitse value%identityAlignment
A0A0A0LV25 Uncharacterized protein6.0e-5239.72Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGHCPN VSYT LI+GYC V NV AA+KLFDEMP N  EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT V MLQTNCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTII+GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

A0A1S3BWE8 pentatricopeptide repeat-containing protein At3g180204.2e-5340Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGH PN VSYT LI+GYC VGNV AA+KLFDEMPEND EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT VVMLQ+NCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTI+ GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

A0A5A7UQI7 Pentatricopeptide repeat-containing protein4.2e-5340Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGH PN VSYT LI+GYC VGNV AA+KLFDEMPEND EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT VVMLQ+NCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTI+ GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

A0A5D3DXA6 Pentatricopeptide repeat-containing protein4.2e-5340Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFV S VNYNRLI QFCSFSLPNVAHR+LFDM  RGH PN VSYT LI+GYC VGNV AA+KLFDEMPEND EP+SLTYSVLI+                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG
                                                                        A+CL N STELLNT VVMLQ+NCQ DVITLNTVIKG
Subjt:  ----------------------------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKG

Query:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        FC +GSIE+ALKVLNDMI  +FC PD+V FTTI+ GLLNVGRI+ESLDILYKVM EKGI+
Subjt:  FCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

A0A6J1C2H5 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g180202.4e-7751.9Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------
        EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLI+GYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH                
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIH----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDM
                                                       AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDM
Subjt:  -----------------------------------------------AICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDM

Query:  IICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
        +ICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
Subjt:  IICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

SwissProt top hitse value%identityAlignment
Q0WPZ6 Pentatricopeptide repeat-containing protein At2g171402.6e-2028.72Show/hide
Query:  STVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQ
        S  +YN L+   C   + + A  I+  M   G CP+AV+Y  L++GYC VG V AAK L  EM  N+  P++ T ++L+H++    + +E       M +
Subjt:  STVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQ

Query:  TNCQSDVITLNTVIKGFCHIGSIEKALKV----------------------LNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREK
             D +T N ++ G C  G ++KA+++                      ++D +I   C PD + ++T++ GL   GR  E+ ++  ++M EK
Subjt:  TNCQSDVITLNTVIKGFCHIGSIEKALKV----------------------LNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREK

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial1.5e-2031.4Show/hide
Query:  VSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVM
        V     YN LIY +    L  +A  +L DM  +G  PN  SYT L++G+C +G +  A  + +EM  +  +P+++ ++ LI A C  ++  E +  F  M
Subjt:  VSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVM

Query:  LQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVM
         +  C+ DV T N++I G C +  I+ AL +L DM I +    + V + T+I   L  G I+E+  ++ +++
Subjt:  LQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVM

Q9LSK8 Pentatricopeptide repeat-containing protein At3g180202.5e-2633.64Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVL------------------
        E V+    Y  +I   C +   + A RI++ M  +G  P   SY  +I+G C  G    A +L +E  E +  PS  TY +L                  
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVL------------------

Query:  -----------------IHAICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQE
                         +  +C+ +  TE+LN  V MLQ +C+ D  TLNTVI G C +G ++ A+KVL+DM+  +FCAPD V   T++ GLL  GR +E
Subjt:  -----------------IHAICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQE

Query:  SLDILYKVMREKGI
        +LD+L +VM E  I
Subjt:  SLDILYKVMREKGI

Q9LUR2 Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial1.5e-2031.03Show/hide
Query:  VNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQTN
        V Y  LI+ FC         +I ++M+ +G   N ++YT LI GYC VG    A+++F++M    A P   TY+VL+  +C   K  + L  F  M +  
Subjt:  VNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQTN

Query:  CQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
           +++T   +I+G C +G +E A  +    +  +   P+ + +TT+I G    G I E+ D L+K M+E G +
Subjt:  CQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

Q9SXD8 Pentatricopeptide repeat-containing protein At1g625902.6e-2035.2Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFV
        E V     YN LI  FC  S  ++A  +L  M   G+ P+ V+ ++L+NGYC    +  A  L D+M E    P ++T++ LIH + L NK++E +    
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFV

Query:  VMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGI
         M+Q  CQ +++T   V+ G C  G  + AL +LN M   +  A D V F TII  L     + ++L+ L+K M  KGI
Subjt:  VMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGI

Arabidopsis top hitse value%identityAlignment
AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein1.9e-2135.2Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFV
        E V     YN LI  FC  S  ++A  +L  M   G+ P+ V+ ++L+NGYC    +  A  L D+M E    P ++T++ LIH + L NK++E +    
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFV

Query:  VMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGI
         M+Q  CQ +++T   V+ G C  G  + AL +LN M   +  A D V F TII  L     + ++L+ L+K M  KGI
Subjt:  VMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGI

AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-2131.25Show/hide
Query:  STVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQ
        + V YN LI   C++   + A R+L DM  R   PN V+++ LI+ +   G +  A+KL+DEM +   +P   TYS LI+  C+ ++  E  + F +M+ 
Subjt:  STVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQ

Query:  TNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
         +C  +V+T NT+IKGFC    +++ +++  +M   +    + V +TT+I+G     R  ++  I++K M   G++
Subjt:  TNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

AT3G16710.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-2131.03Show/hide
Query:  VNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQTN
        V Y  LI+ FC         +I ++M+ +G   N ++YT LI GYC VG    A+++F++M    A P   TY+VL+  +C   K  + L  F  M +  
Subjt:  VNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQTN

Query:  CQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM
           +++T   +I+G C +G +E A  +    +  +   P+ + +TT+I G    G I E+ D L+K M+E G +
Subjt:  CQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM

AT3G18020.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-2733.64Show/hide
Query:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVL------------------
        E V+    Y  +I   C +   + A RI++ M  +G  P   SY  +I+G C  G    A +L +E  E +  PS  TY +L                  
Subjt:  EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVL------------------

Query:  -----------------IHAICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQE
                         +  +C+ +  TE+LN  V MLQ +C+ D  TLNTVI G C +G ++ A+KVL+DM+  +FCAPD V   T++ GLL  GR +E
Subjt:  -----------------IHAICLANKSTELLNTFVVMLQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQE

Query:  SLDILYKVMREKGI
        +LD+L +VM E  I
Subjt:  SLDILYKVMREKGI

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-2131.4Show/hide
Query:  VSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVM
        V     YN LIY +    L  +A  +L DM  +G  PN  SYT L++G+C +G +  A  + +EM  +  +P+++ ++ LI A C  ++  E +  F  M
Subjt:  VSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVM

Query:  LQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVM
         +  C+ DV T N++I G C +  I+ AL +L DM I +    + V + T+I   L  G I+E+  ++ +++
Subjt:  LQTNCQSDVITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGTTTGTTTCTTCTACAGTGAATTATAATCGATTGATTTATCAGTTTTGTTCGTTTTCTCTACCGAATGTAGCTCATAGGATTTTATTCGATATGACGGGTAGAGGGCA
TTGCCCAAATGCTGTTTCATATACTACCTTGATTAATGGATACTGCTGTGTTGGTAATGTACCTGCTGCAAAGAAACTGTTTGATGAAATGCCTGAGAATGACGCGGAGC
CTAGTTCTCTTACATATAGTGTTCTAATTCATGCTATTTGCCTTGCAAATAAGTCAACCGAGCTCTTAAATACATTTGTTGTAATGCTTCAAACCAATTGTCAATCTGAT
GTTATTACCCTGAATACAGTTATCAAGGGATTTTGTCATATTGGAAGCATTGAAAAAGCTCTAAAGGTATTAAATGATATGATCATTTGTCAATTTTGTGCCCCTGATTA
TGTGAACTTCACGACTATTATATATGGGTTACTGAATGTTGGGAGGATCCAGGAATCTCTTGATATATTATATAAAGTAATGCGAGAAAAAGGCATTATG
mRNA sequenceShow/hide mRNA sequence
GAGTTTGTTTCTTCTACAGTGAATTATAATCGATTGATTTATCAGTTTTGTTCGTTTTCTCTACCGAATGTAGCTCATAGGATTTTATTCGATATGACGGGTAGAGGGCA
TTGCCCAAATGCTGTTTCATATACTACCTTGATTAATGGATACTGCTGTGTTGGTAATGTACCTGCTGCAAAGAAACTGTTTGATGAAATGCCTGAGAATGACGCGGAGC
CTAGTTCTCTTACATATAGTGTTCTAATTCATGCTATTTGCCTTGCAAATAAGTCAACCGAGCTCTTAAATACATTTGTTGTAATGCTTCAAACCAATTGTCAATCTGAT
GTTATTACCCTGAATACAGTTATCAAGGGATTTTGTCATATTGGAAGCATTGAAAAAGCTCTAAAGGTATTAAATGATATGATCATTTGTCAATTTTGTGCCCCTGATTA
TGTGAACTTCACGACTATTATATATGGGTTACTGAATGTTGGGAGGATCCAGGAATCTCTTGATATATTATATAAAGTAATGCGAGAAAAAGGCATTATG
Protein sequenceShow/hide protein sequence
EFVSSTVNYNRLIYQFCSFSLPNVAHRILFDMTGRGHCPNAVSYTTLINGYCCVGNVPAAKKLFDEMPENDAEPSSLTYSVLIHAICLANKSTELLNTFVVMLQTNCQSD
VITLNTVIKGFCHIGSIEKALKVLNDMIICQFCAPDYVNFTTIIYGLLNVGRIQESLDILYKVMREKGIM