CuGenDBv2

Gene ID	MS002169
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Leucine rich repeat 4
Genome location	scaffold30:2924297..2924539
RNA-Seq Expression	MS002169
Synteny	MS002169
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7021659.1 Serine/threonine-protein kinase 11-interacting protein [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-19

67.9

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++LLNFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

XP_022134882.1 uncharacterized protein LOC111007033 [Momordica charantia]

4.8e-35

100

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Query:  VVELEGALCVTLFLEFATSEFSLIPIEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VVELEGALCVTLFLEFATSEFSLIPIEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
Subjt:  VVELEGALCVTLFLEFATSEFSLIPIEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

XP_022933984.1 uncharacterized protein LOC111441231 isoform X1 [Cucurbita moschata]

2.8e-19

67.9

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++LLNFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

XP_023530675.1 uncharacterized protein LOC111793156 isoform X1 [Cucurbita pepo subsp. pepo]

2.8e-19

67.9

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++LLNFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

XP_023530676.1 uncharacterized protein LOC111793156 isoform X2 [Cucurbita pepo subsp. pepo]

2.8e-19

67.9

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++LLNFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C0W0 uncharacterized protein LOC111007033

2.3e-35

100

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Query:  VVELEGALCVTLFLEFATSEFSLIPIEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VVELEGALCVTLFLEFATSEFSLIPIEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
Subjt:  VVELEGALCVTLFLEFATSEFSLIPIEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

A0A6J1F0J7 uncharacterized protein LOC111441231 isoform X2

1.4e-19

67.9

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++LLNFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

A0A6J1F1A1 uncharacterized protein LOC111441231 isoform X1

1.4e-19

67.9

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++LLNFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

A0A6J1I7W6 uncharacterized protein LOC111472125 isoform X1

3.0e-19

66.67

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++L+NFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

A0A6J1IDJ8 uncharacterized protein LOC111472125 isoform X2

3.0e-19

66.67

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Query:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS
        VV+++GALCVTL L+FA+SEFSL+P  +E  T  KK+ SS    KWK+KW  E++L+NFIALAKAIHLGSKESPLPVRY+S
Subjt:  VVELEGALCVTLFLEFATSEFSLIP-IEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G48540.1 Outer arm dynein light chain 1 protein

4.2e-05

41.27

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Query:  SEFSLIPIEE---VATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRY
        SE S + IE    V ++K K+K +   + WKLKW   ++ + F AL KA+H  S + PL VRY
Subjt:  SEFSLIPIEE---VATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRY

AT1G48540.2 Outer arm dynein light chain 1 protein

3.6e-04

43.18

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Query:  KDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRY
        K+K +   + WKLKW   ++ + F AL KA+H  S + PL VRY
Subjt:  KDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRY

Sequences

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CDS sequence

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CAGGTCGTTGAACTGGAGGGGGCTTTATGTGTAACTTTATTTTTAGAATTTGCAACATCAGAGTTCTCCTTAATCCCCATTGAGGAGGTCGCCACCGTGAAGAAGAAGGA
TAAGTCATCGTCGCGTCATATAAAATGGAAATTAAAGTGGTTATGTGAAAAGAGTCTACTGAATTTCATTGCACTGGCGAAGGCAATCCACCTGGGAAGTAAGGAGTCCC
CTTTGCCTGTAAGATATGTATCA

mRNA sequence

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Protein sequence

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QVVELEGALCVTLFLEFATSEFSLIPIEEVATVKKKDKSSSRHIKWKLKWLCEKSLLNFIALAKAIHLGSKESPLPVRYVS

MS002169 (gene) of Bitter gourd (TR) v1 genome