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MS002170 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002170
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:2928886..2929371
RNA-Seq ExpressionMS002170
SyntenyMS002170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058153.1 hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa]5.6e-4365.16Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MT KVLLRS A+ H +SSL+D K+DAP+ERRQFAEVAGGSAAECTA+CCCCP TV+NI+IF+IY+MPAGLCRKA+N RKRH +MK+K LIQQR+  + +F
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS
        TDGS GP  I  F        G       AD  DL  LEEEMWG+FSQTGFWR+S
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS

KGN63891.1 hypothetical protein Csa_014343 [Cucumis sativus]7.0e-4667.74Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MT KVLLRS AI H +S L+D K+DAPRERRQFAEVAGGSAAECTA+CCCCP TV+NI+IFAIY+MPAGLCRKA+N RKRH +MK+K LIQQR+ AS++F
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQ
        TDGS GP  I G+         A       +DL  LE+EMWG+FSQTGFWRSSSQ
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQ

TYK28512.1 hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]4.3e-4365.81Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MT KVLLRS A+ H +SSL+D K+DAP+ERRQFAEVAGGSAAECTA+CCCCP TV+NI IFAIY+MPAGLCRKA+N RKRH +MK+K LIQQR+  + +F
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS
        TDGS GP  I  F        G       AD  DL  LEEEMWG+FSQTGFWR+S
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS

XP_022134785.1 uncharacterized protein LOC111006972 [Momordica charantia]2.5e-8396.99Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKAL SRKRHGKMKKKRLIQQRRGASQEF
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSS----QTQTQRHE
        TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSS    QTQTQRHE
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSS----QTQTQRHE

XP_038879203.1 uncharacterized protein LOC120071168 [Benincasa hispida]3.2e-4666.06Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MT KVLLRSPA+ H      DEK+DAP+ERRQFAEVAGGSAAECTAICCCCP TVMNIVIFA+Y+MPAGLCRKA+N RKRH KMKKK LIQQR+  S +F
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPK---SADDLIHLEEEMWGQFSQTGFWRSSSQTQTQRHE
        TDGS GP         P +   A   P      +DL  LEEEMWG+F+QTGFWRSSS    QRHE
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPK---SADDLIHLEEEMWGQFSQTGFWRSSSQTQTQRHE

TrEMBL top hitse value%identityAlignment
A0A0A0LV48 Uncharacterized protein3.4e-4667.74Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MT KVLLRS AI H +S L+D K+DAPRERRQFAEVAGGSAAECTA+CCCCP TV+NI+IFAIY+MPAGLCRKA+N RKRH +MK+K LIQQR+ AS++F
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQ
        TDGS GP  I G+         A       +DL  LE+EMWG+FSQTGFWRSSSQ
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQ

A0A5A7UQK6 Uncharacterized protein2.7e-4365.16Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MT KVLLRS A+ H +SSL+D K+DAP+ERRQFAEVAGGSAAECTA+CCCCP TV+NI+IF+IY+MPAGLCRKA+N RKRH +MK+K LIQQR+  + +F
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS
        TDGS GP  I  F        G       AD  DL  LEEEMWG+FSQTGFWR+S
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS

A0A5D3DY75 Uncharacterized protein2.1e-4365.81Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MT KVLLRS A+ H +SSL+D K+DAP+ERRQFAEVAGGSAAECTA+CCCCP TV+NI IFAIY+MPAGLCRKA+N RKRH +MK+K LIQQR+  + +F
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS
        TDGS GP  I  F        G       AD  DL  LEEEMWG+FSQTGFWR+S
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSAD--DLIHLEEEMWGQFSQTGFWRSS

A0A6J1BZB0 uncharacterized protein LOC1110069721.2e-8396.99Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKAL SRKRHGKMKKKRLIQQRRGASQEF
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSS----QTQTQRHE
        TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSS    QTQTQRHE
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSS----QTQTQRHE

A0A6J1F6E1 uncharacterized protein LOC1114412344.3e-4159.88Show/hide
Query:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF
        M  KVLLRS AI    SS K EK DA R++RQFAE+AGGSAA+CT ICCCCP TVMN+VIFA+Y+MP GLCRKA+N RKRH ++K+K LIQQR+ ASQEF
Subjt:  MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEF

Query:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQTQTQRHE
         D S  P  +  F+        A       +D+  LEEEMWG+F+QTGFWRSSS    QRHE
Subjt:  TDGSEGPGGIGGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQTQTQRHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein4.3e-1735.09Show/hide
Query:  MTGKVLLRSP-AIGHYKSSLKD---EKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGA
        MT  V+L+SP  +   +S++++         +ERR+  EVAGG+AAEC A+ CCCP  V+N+++ A+YK+PA +C+KA        + K++R  ++R G 
Subjt:  MTGKVLLRSP-AIGHYKSSLKD---EKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGA

Query:  SQEFT-DGSEGP--GGIGGFDQVPP------QVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQTQT
            T +GSE      +   D           V G E      +D++ LE EM  +F   GFWRS SQ  T
Subjt:  SQEFT-DGSEGP--GGIGGFDQVPP------QVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQTQT

AT3G11690.1 unknown protein4.9e-1330.34Show/hide
Query:  SPAIGHYKSSLKDEKLDAPRERRQF-----AEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKK----------KRLIQQR
        SP+  + +  L    L +P  R        AE  GG+ A C A+ CCCP  ++N+++ AIYK+P G+CR+A+ SR+R   +K           K    QR
Subjt:  SPAIGHYKSSLKDEKLDAPRERRQF-----AEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKK----------KRLIQQR

Query:  RGASQEFT-------DGSEGPGGIGGFD------QVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQTQT
           + EF        D S+        D       V       E   +  + ++ LE+EMW +F   GFWRS SQ ++
Subjt:  RGASQEFT-------DGSEGPGGIGGFD------QVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQTQT

AT5G06380.1 unknown protein9.6e-1739.06Show/hide
Query:  AEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEFTDGSE--GPGGIGGFDQVPPQVPGAEPGPKSAD
        AE  GG+ A C A+C C P +V+N+V+ A+YK+P GLCR+A+            R I+++R A +EF +     G GG   F   P +    E   +  D
Subjt:  AEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEFTDGSE--GPGGIGGFDQVPPQVPGAEPGPKSAD

Query:  D-LIHLEEEMWGQFSQTGFWRSSSQTQT
        + +I LE+EMW +F   GFWRS SQ +T
Subjt:  D-LIHLEEEMWGQFSQTGFWRSSSQTQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGAAAAGTCCTCCTCCGATCTCCGGCGATCGGCCATTACAAATCGTCGCTCAAGGACGAGAAACTCGATGCGCCGAGAGAGAGGCGGCAGTTTGCGGAGGTGGC
CGGGGGTTCGGCGGCCGAATGTACGGCGATATGCTGCTGCTGCCCGTTGACGGTGATGAACATCGTGATCTTTGCCATCTACAAGATGCCGGCGGGGCTTTGCCGGAAGG
CGTTGAACAGTAGAAAGCGACACGGGAAAATGAAGAAGAAGCGTCTGATTCAGCAGCGGAGGGGCGCCTCTCAGGAGTTTACAGATGGATCGGAGGGGCCCGGCGGAATT
GGAGGATTTGATCAGGTGCCACCACAAGTCCCCGGCGCCGAACCCGGTCCCAAATCGGCCGACGACCTCATCCATTTAGAAGAGGAAATGTGGGGCCAGTTCTCTCAGAC
CGGGTTTTGGAGGAGTTCTTCTCAAACCCAAACTCAAAGACACGAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGGAAAAGTCCTCCTCCGATCTCCGGCGATCGGCCATTACAAATCGTCGCTCAAGGACGAGAAACTCGATGCGCCGAGAGAGAGGCGGCAGTTTGCGGAGGTGGC
CGGGGGTTCGGCGGCCGAATGTACGGCGATATGCTGCTGCTGCCCGTTGACGGTGATGAACATCGTGATCTTTGCCATCTACAAGATGCCGGCGGGGCTTTGCCGGAAGG
CGTTGAACAGTAGAAAGCGACACGGGAAAATGAAGAAGAAGCGTCTGATTCAGCAGCGGAGGGGCGCCTCTCAGGAGTTTACAGATGGATCGGAGGGGCCCGGCGGAATT
GGAGGATTTGATCAGGTGCCACCACAAGTCCCCGGCGCCGAACCCGGTCCCAAATCGGCCGACGACCTCATCCATTTAGAAGAGGAAATGTGGGGCCAGTTCTCTCAGAC
CGGGTTTTGGAGGAGTTCTTCTCAAACCCAAACTCAAAGACACGAG
Protein sequenceShow/hide protein sequence
MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVIFAIYKMPAGLCRKALNSRKRHGKMKKKRLIQQRRGASQEFTDGSEGPGGI
GGFDQVPPQVPGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQTQTQRHE