CuGenDBv2

Gene ID	MS002172
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein disulfide-isomerase LQY1
Genome location	scaffold30:2942804..2943955
RNA-Seq Expression	MS002172
Synteny	MS002172
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587696.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-52

82.48

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M ALPSTAAL++LPQLPLLK E+PLLY  S ASAS +  AS A ++SAAAIH I+ VIHP+LLFN++DAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKC+FCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

TYK28514.1 protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa]

2.9e-53

83.21

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M+ALPSTAALH+LP LPLLK E+PLLY     S S+A T SS  STSAAAIHPI P+IHP+LLF++FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

XP_008453507.1 PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo]

2.3e-53

83.21

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M+ALPSTAALH+LP LPLLK E+PLLY     S S+A T SS  STSAAAIHPI P+IHP+LLF++FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

XP_022134916.1 uncharacterized protein LOC111007052 [Momordica charantia]

2.6e-65

98.54

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGP+P
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

XP_023531506.1 uncharacterized protein LOC111793722 [Cucurbita pepo subsp. pepo]

1.7e-53

82.48

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M ALPSTAAL++LPQ+PLLK E+PLLY  S ASASA+ +AS A ++SAAAIH I+ VIHP+LLFN++DAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKC+FCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BXK6 uncharacterized protein LOC103494197 isoform X1

1.1e-53

83.21

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M+ALPSTAALH+LP LPLLK E+PLLY     S S+A T SS  STSAAAIHPI P+IHP+LLF++FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

A0A5A7UVF5 Protein disulfide-isomerase LQY1

1.1e-53

83.21

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M+ALPSTAALH+LP LPLLK E+PLLY     S S+A T SS  STSAAAIHPI P+IHP+LLF++FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

A0A5D3DYE8 Protein disulfide-isomerase LQY1

1.4e-53

83.21

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M+ALPSTAALH+LP LPLLK E+PLLY     S S+A T SS  STSAAAIHPI P+IHP+LLF++FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

A0A6J1BZ42 uncharacterized protein LOC111007052

1.2e-65

98.54

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGP+P
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

A0A6J1F1B4 uncharacterized protein LOC111441233

7.1e-53

81.75

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Query:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
        M ALPSTAAL++LPQLPLLK E+PLLY  S AS S + +AS A ++SAAAIH I+ VIHP+LLFN++DAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP
Subjt:  MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVP

Query:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        CERCAGNGGTKC+FCDNGKMQQQSGLIDCKVCKGAG+
Subjt:  CERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

SwissProt top hits

e value

%identity

Alignment

A0A2K3DZC4 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

1.2e-04

31.25

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Query:  APLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD----NGKMQQQ---------SGLI--------------DCKVCKGAGI
        AP   Q  +   +V+ A+S++L+ GLK  PVPC  C G GG +C  C     N  + +           G+               DCKVC+GAG+
Subjt:  APLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD----NGKMQQQ---------SGLI--------------DCKVCKGAGI

Arabidopsis top hits

e value

%identity

Alignment

AT3G44020.1 thylakoid lumenal P17.1 protein

2.8e-25

48.59

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Query:  PLLKLELPLLYSSSSASASAATTA----------------SSACSTSAAAIHPIAPVIHPILLF--NTFDAP---LDTQTFLATFSVLVAISLSLFLGLK
        PL+ L+  LL SSSS+S+   TT                  +  S ++   H    +IHP +LF  + FD     +DTQTF+ T S++VAI+LSLFLG K
Subjt:  PLLKLELPLLYSSSSASASAATTA----------------SSACSTSAAAIHPIAPVIHPILLF--NTFDAP---LDTQTFLATFSVLVAISLSLFLGLK

Query:  GGPVPCERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI
        G PVPCERC GNGGTKCVFC  GKM+ +SG++DCKVCKG+G+
Subjt:  GGPVPCERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGI

Sequences

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CDS sequence

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ATGTCTGCGCTACCTTCCACGGCCGCTCTCCACCTTCTCCCACAACTTCCATTACTCAAGCTCGAACTTCCGCTTCTCTACTCTTCTTCTTCTGCCTCTGCTTCTGCTGC
AACTACTGCTTCTTCCGCCTGCTCCACTTCCGCCGCCGCCATACACCCGATCGCCCCAGTCATCCATCCCATTTTGCTCTTCAATACCTTCGACGCGCCATTGGACACCC
AAACTTTCCTTGCTACTTTCAGCGTTTTGGTTGCCATTTCTCTCTCCCTCTTTCTTGGTCTTAAGGGTGGTCCTGTGCCTTGTGAGCGTTGTGCTGGAAATGGTGGCACA
AAATGTGTCTTCTGTGACAATGGAAAGATGCAACAACAGTCGGGATTAATTGACTGCAAGGTGTGTAAGGGTGCAGGTATT

mRNA sequence

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Protein sequence

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MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHPILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGT
KCVFCDNGKMQQQSGLIDCKVCKGAGI

MS002172 (gene) of Bitter gourd (TR) v1 genome