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MS002199 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002199
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:3153733..3154171
RNA-Seq ExpressionMS002199
SyntenyMS002199
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589671.1 hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sororia]6.2e-3574.07Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        M  SHF+FF LLF  FYLLSV R  SPP    S  RPARKYLG+SFSNPESE+ KVKVH+D  NRPSA+ ISSN+P YEAS+D +GELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

KGN65505.1 hypothetical protein Csa_019778 [Cucumis sativus]1.2e-3068.52Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        MR SHFIFFCLLFT FYL S+D  HSPP L  S  R ARKYLGTSFS+        +VH+D  NRPS +  SSN P YEAS+++LGELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_022921360.1 uncharacterized protein LOC111429652 [Cucurbita moschata]1.8e-3473.15Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        M  SHF+FF LLF  FYLLSV R  SPP    S  RPARKYLG+SFSNPESE+ KV+VH+D  NRPSA+ ISSN+P YEAS+D +GELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_022987350.1 uncharacterized protein LOC111484929 [Cucurbita maxima]9.0e-3472.22Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        M  SHF+FF LLF  FYLLSV R  SPP    S  RPARKYLG+ FSNPESE+ KV+VH+D  NRPSA+ ISSN+P YEAS+D +GELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_023515382.1 uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo]8.1e-3573.15Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        M  SHF+FF LLF  FYLLSV R  SPP  +    RPARKYLG+SFSNPESE+ KV+VHKD  NRPSA+ ISSN+P YEAS+D +GELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

TrEMBL top hitse value%identityAlignment
A0A0A0LUD6 Uncharacterized protein5.9e-3168.52Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        MR SHFIFFCLLFT FYL S+D  HSPP L  S  R ARKYLGTSFS+        +VH+D  NRPS +  SSN P YEAS+++LGELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

A0A5D3DYI5 Uncharacterized protein3.7e-2567.82Show/hide
Query:  VDRFHSPPQLSASARRPARKYLGTSFSN-PESEYRKVKVHKDNRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTHPNPTPKHP
        +D  HSPP+L  S  RPARKYLGTSFSN P+SEY +V   + NRPS + +SSN P +EAS+++LGEL+YHIDYHGVTTHPNPTPKHP
Subjt:  VDRFHSPPQLSASARRPARKYLGTSFSN-PESEYRKVKVHKDNRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTHPNPTPKHP

A0A5J5B1E1 Uncharacterized protein2.8e-1245.28Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKDNRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTHPN
        MR S+ IFFCLL TA Y  S     SPP    S RRP R++   S S  + +Y+K+KV+++ + S     S      +S  +  +L+YHIDYHGVTTH  
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKDNRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTHPN

Query:  PTPKHP
        PTPKHP
Subjt:  PTPKHP

A0A6J1E5F1 uncharacterized protein LOC1114296528.8e-3573.15Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        M  SHF+FF LLF  FYLLSV R  SPP    S  RPARKYLG+SFSNPESE+ KV+VH+D  NRPSA+ ISSN+P YEAS+D +GELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

A0A6J1JGL7 uncharacterized protein LOC1114849294.4e-3472.22Show/hide
Query:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH
        M  SHF+FF LLF  FYLLSV R  SPP    S  RPARKYLG+ FSNPESE+ KV+VH+D  NRPSA+ ISSN+P YEAS+D +GELVYHIDYHGVTTH
Subjt:  MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKD--NRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTGCCTTCTATCTTCTTTCAGTGGATCGTTTTCATTCTCCACCTCAACTTTCCGCCTCTGCAAGAAGACC
TGCAAGAAAGTACCTTGGTACATCATTTTCCAATCCCGAATCTGAATATCGTAAAGTTAAGGTTCACAAAGATAATAGACCGTCTGCGGAAGGAATTTCCTCCAACATGC
CTGGATATGAAGCAAGTGTTGATAATTTGGGTGAACTTGTCTACCACATCGACTATCATGGAGTGACAACGCATCCAAATCCAACCCCAAAACATCCG
mRNA sequenceShow/hide mRNA sequence
ATGAGACCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTGCCTTCTATCTTCTTTCAGTGGATCGTTTTCATTCTCCACCTCAACTTTCCGCCTCTGCAAGAAGACC
TGCAAGAAAGTACCTTGGTACATCATTTTCCAATCCCGAATCTGAATATCGTAAAGTTAAGGTTCACAAAGATAATAGACCGTCTGCGGAAGGAATTTCCTCCAACATGC
CTGGATATGAAGCAAGTGTTGATAATTTGGGTGAACTTGTCTACCACATCGACTATCATGGAGTGACAACGCATCCAAATCCAACCCCAAAACATCCG
Protein sequenceShow/hide protein sequence
MRPSHFIFFCLLFTAFYLLSVDRFHSPPQLSASARRPARKYLGTSFSNPESEYRKVKVHKDNRPSAEGISSNMPGYEASVDNLGELVYHIDYHGVTTHPNPTPKHP