CuGenDBv2

Gene ID	MS002201
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Membrane fusion protein Use1
Genome location	scaffold30:3170012..3173740
RNA-Seq Expression	MS002201
Synteny	MS002201
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR019150 - Vesicle transport protein, Use1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134064.1 uncharacterized protein LOC101209335 [Cucumis sativus]

4.8e-93

82.79

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MGLSKTEINLKRLLATAPHQKDQAKLIH                 P    R   VSKALLGDYSEKIEAIASKL VPLPDVEESSEPSTS SVRE SS+ 
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
        E ++NT SSP GLRRRF  SS+V+DRSHGTIK+DSSAPVKLDAAAI+HIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
Subjt:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA

Query:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TTGRVNKRAV+IYSESSKTSCFTWLAIF MTCVFVMVVLLIRVT
Subjt:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

XP_008438519.1 PREDICTED: uncharacterized protein LOC103483591 [Cucumis melo]

3.4e-94

83.61

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MGLSKTEINLKRLLATAPHQKDQAKLIH                 P    R   VSKALLGDYSEKIEAIASKL VPLPDVEESSEPSTS SVRE SSV 
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
        EG++NT SSP GLRRRF  SS V+DRSHGTIKEDSSAPVKLDAAAI+HIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
Subjt:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA

Query:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TTGRVNKRAV+IYSESSKTSCFTWLAIFAMTC+F+MVVLLIRVT
Subjt:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

XP_022135542.1 uncharacterized protein LOC111007470 [Momordica charantia]

4.8e-101

89.3

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        M LSKTEINLKRLLATAP QKDQAKLIH                 P    R   VSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT
        EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT
Subjt:  EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT

Query:  TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
Subjt:  TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

XP_022921329.1 uncharacterized protein LOC111429634 isoform X1 [Cucurbita moschata]

2.4e-92

82.86

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MGLSKTEINLKRLLATAPHQKDQAKLIH                 P    R   VSKALLGDY+EKIEAIASKLAVPLPD EESSEPSTS SV+EFSSV 
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNT-LSSPGLRRRFQP-SSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSL
        EG++N   S PGLRRRF P SSVV+DRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLA+QLKESSLIMSKSLE+TEKILDSTEKAVEDSL
Subjt:  EGEVNT-LSSPGLRRRFQP-SSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSL

Query:  ATTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        ATTGRVNKRAV+IYSESSKTSCFTWLAIF MTCVFVMVVLLIRVT
Subjt:  ATTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

XP_038879132.1 uncharacterized protein LOC120071129 isoform X3 [Benincasa hispida]

1.3e-93

83.61

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MGLSKTEINLKRLLATAPHQKDQAKLIH                 P    R   VSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTS S RE SSV 
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
        EG++NT SSP GLRRRF  SS+V+DRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLE+TEKILDSTEKAVEDSLA
Subjt:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA

Query:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TTG+VNKRAV+IYSESSKTSCFTWLAIF MTCVFVMVVLLIRVT
Subjt:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4E3 Uncharacterized protein

3.0e-96

87.77

Show/hide

Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHVRPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVVEGEVNTLSSP-GLRR
        MGLSKTEINLKRLLATAPHQKDQAKLIH    D    + VSKALLGDYSEKIEAIASKL VPLPDVEESSEPSTS SVRE SS+ E ++NT SSP GLRR
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHVRPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVVEGEVNTLSSP-GLRR

Query:  RFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLATTGRVNKRAVEIYSE
        RF  SS+V+DRSHGTIK+DSSAPVKLDAAAI+HIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLATTGRVNKRAV+IYSE
Subjt:  RFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLATTGRVNKRAVEIYSE

Query:  SSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        SSKTSCFTWLAIF MTCVFVMVVLLIRVT
Subjt:  SSKTSCFTWLAIFAMTCVFVMVVLLIRVT

A0A1S3AWP3 uncharacterized protein LOC103483591

1.6e-94

83.61

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MGLSKTEINLKRLLATAPHQKDQAKLIH                 P    R   VSKALLGDYSEKIEAIASKL VPLPDVEESSEPSTS SVRE SSV 
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
        EG++NT SSP GLRRRF  SS V+DRSHGTIKEDSSAPVKLDAAAI+HIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
Subjt:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA

Query:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TTGRVNKRAV+IYSESSKTSCFTWLAIFAMTC+F+MVVLLIRVT
Subjt:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

A0A5A7U6J9 Cation exchanger family protein

1.6e-94

83.61

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MGLSKTEINLKRLLATAPHQKDQAKLIH                 P    R   VSKALLGDYSEKIEAIASKL VPLPDVEESSEPSTS SVRE SSV 
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
        EG++NT SSP GLRRRF  SS V+DRSHGTIKEDSSAPVKLDAAAI+HIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA
Subjt:  EGEVNTLSSP-GLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLA

Query:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TTGRVNKRAV+IYSESSKTSCFTWLAIFAMTC+F+MVVLLIRVT
Subjt:  TTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

A0A6J1C2Z7 uncharacterized protein LOC111007470

2.3e-101

89.3

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        M LSKTEINLKRLLATAP QKDQAKLIH                 P    R   VSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT
        EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT
Subjt:  EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT

Query:  TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
Subjt:  TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

A0A6J1E043 uncharacterized protein LOC111429634 isoform X1

1.2e-92

82.86

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Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MGLSKTEINLKRLLATAPHQKDQAKLIH                 P    R   VSKALLGDY+EKIEAIASKLAVPLPD EESSEPSTS SV+EFSSV 
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNT-LSSPGLRRRFQP-SSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSL
        EG++N   S PGLRRRF P SSVV+DRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLA+QLKESSLIMSKSLE+TEKILDSTEKAVEDSL
Subjt:  EGEVNT-LSSPGLRRRFQP-SSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSL

Query:  ATTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        ATTGRVNKRAV+IYSESSKTSCFTWLAIF MTCVFVMVVLLIRVT
Subjt:  ATTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G54110.1 Membrane fusion protein Use1

3.7e-51

Show/hide

Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVVEGE
        MG+ KTEIN  RLL+ AP+Q++Q+KL+H                       V+ A + +Y EKIEA+ S++   +P  E S E     S  + S  VE +
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVVEGE

Query:  VNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLATTGR
          T +SP LRRR  P+S  +     +   D S P+KLD AA + + K RKLQEDLTDEMV LA+QLKE S ++S+S++NTEKILDSTE+A+E SLA+TG 
Subjt:  VNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLATTGR

Query:  VNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
           RA +IYSESSKTSCF WL I AMTCVF+MVV+LIRVT
Subjt:  VNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

AT3G55600.1 Membrane fusion protein Use1

2.7e-57

54.73

Show/hide

Query:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV
        MG+SKTEINL+RLL+ AP+Q++Q+KL+H                 P    R   V+KA + +Y EKIEA+ASK+A   P+ E S EP    S    S  +
Subjt:  MGLSKTEINLKRLLATAPHQKDQAKLIHV---------------RPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVV

Query:  EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT
        E E  + +SP LRRR  P+S   ++S      DSS P+KLD AA +HI+KHRKLQEDLTDEMV LA+QLKE S  +S+S++NTEKILDSTE+A+E SLA+
Subjt:  EGEVNTLSSPGLRRRFQPSSVVDDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLAT

Query:  TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT
        TG    RA +IYS+SSKTSCF WL IFAM CVF+MVVLLIRVT
Subjt:  TGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT

Sequences

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CDS sequence

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ATGGGTTTAAGTAAAACTGAGATCAACTTGAAGCGGCTGCTGGCTACTGCCCCTCATCAGAAGGATCAAGCCAAACTAATACATGTACGTCCAGGTGATTGTGTGAGATT
TCTTATTGTTTCAAAGGCTTTGCTTGGTGATTATTCAGAGAAGATAGAGGCCATTGCTTCGAAATTAGCTGTTCCTTTGCCTGATGTGGAAGAGTCTTCTGAGCCCTCTA
CAAGTGCTTCAGTTAGAGAATTTTCTTCTGTAGTAGAAGGAGAAGTAAACACCCTTTCATCTCCAGGACTAAGGAGGAGATTTCAGCCTTCCTCTGTTGTGGACGATAGA
TCTCATGGTACCATCAAAGAAGACTCTTCAGCACCTGTCAAGTTGGATGCAGCAGCAATATCCCACATCGAGAAACACAGGAAGCTTCAAGAGGACTTGACTGATGAAAT
GGTTGGCTTAGCAAAGCAACTGAAAGAGAGCAGTCTGATTATGAGCAAATCTCTGGAGAACACTGAAAAGATACTGGATTCCACAGAGAAGGCCGTTGAGGATAGCTTGG
CAACCACCGGTCGGGTCAACAAACGTGCTGTCGAGATTTACTCAGAGAGCTCGAAAACTTCATGCTTCACTTGGTTGGCAATCTTTGCAATGACCTGCGTTTTCGTAATG
GTCGTGCTTCTAATTCGAGTCACT

mRNA sequence

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Protein sequence

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MGLSKTEINLKRLLATAPHQKDQAKLIHVRPGDCVRFLIVSKALLGDYSEKIEAIASKLAVPLPDVEESSEPSTSASVREFSSVVEGEVNTLSSPGLRRRFQPSSVVDDR
SHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKILDSTEKAVEDSLATTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVM
VVLLIRVT

MS002201 (gene) of Bitter gourd (TR) v1 genome