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MS002219 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002219
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCW-type domain-containing protein
Genome locationscaffold30:3316293..3317073
RNA-Seq ExpressionMS002219
SyntenyMS002219
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0046274 - lignin catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0005507 - copper ion binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0052716 - hydroquinone:oxygen oxidoreductase activity (molecular function)
InterPro domainsIPR011124 - Zinc finger, CW-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588044.1 hypothetical protein SDJN03_16609, partial [Cucurbita argyrosperma subsp. sororia]8.7e-4086.67Show/hide
Query:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVI------NGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        SDTDA GEPLE+DPS SF MHEQSTNKPCRLSAIGNWLQCQQVI      NG+ICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQ
Subjt:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVI------NGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

KGN65840.2 hypothetical protein Csa_019577 [Cucumis sativus]1.1e-3986.52Show/hide
Query:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        DTDAIGEPLE+D SESF+MHEQSTNKPCRLS IGNWLQCQQVI+G+      ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

XP_011656989.1 uncharacterized protein LOC101212408 isoform X1 [Cucumis sativus]1.1e-3986.52Show/hide
Query:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        DTDAIGEPLE+D SESF+MHEQSTNKPCRLS IGNWLQCQQVI+G+      ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

XP_022135117.1 uncharacterized protein LOC111007173 [Momordica charantia]1.5e-44100Show/hide
Query:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

XP_031741584.1 uncharacterized protein LOC101212408 isoform X2 [Cucumis sativus]1.1e-3986.52Show/hide
Query:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        DTDAIGEPLE+D SESF+MHEQSTNKPCRLS IGNWLQCQQVI+G+      ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

TrEMBL top hitse value%identityAlignment
A0A0A0LWX9 CW-type domain-containing protein4.2e-4085.56Show/hide
Query:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        +DTDAIGEPLE+D SESF+MHEQSTNKPCRLS IGNWLQCQQVI+G+      ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

A0A5A7USR9 Tyrosine-protein kinase BAZ1B4.7e-3984.44Show/hide
Query:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        SDTDAIGEPLE+D SESF MHEQSTNK CRLS IGNWLQCQQV++G+      ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGI------ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

A0A6J1C1R7 uncharacterized protein LOC1110071737.4e-45100Show/hide
Query:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
Subjt:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

A0A6J1F145 uncharacterized protein LOC111441172 isoform X11.2e-3986.52Show/hide
Query:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVI------NGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        DTDA GEPLE+DPS SF MHEQSTNKPCRLSAIGNWLQCQQVI      NG+ICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQ
Subjt:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVI------NGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

A0A6J1F652 uncharacterized protein LOC111441172 isoform X21.2e-3986.52Show/hide
Query:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVI------NGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        DTDA GEPLE+DPS SF MHEQSTNKPCRLSAIGNWLQCQQVI      NG+ICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQ
Subjt:  DTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVI------NGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein3.2e-2457.65Show/hide
Query:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQC-QQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ
        SDT  +GEPLE+  SE     +++ N   + SA+ NWLQC ++  NG+ICGKWRRAP  EVQT DWECFC   WDP+ ADCAVPQ
Subjt:  SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQC-QQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTGATACTGATGCCATTGGTGAACCACTGGAGGTGGATCCTTCAGAATCTTTTCAAATGCATGAGCAGAGTACCAATAAGCCCTGTAGATTGAGCGCTATTGGAAATTG
GCTTCAATGTCAACAAGTCATCAATGGAATCATATGTGGCAAGTGGCGCAGGGCTCCACTTTTTGAAGTCCAAACTGATGACTGGGAGTGCTTCTGCTCTATCCTATGGG
ATCCAACACATGCTGATTGTGCTGTACCTCAG
mRNA sequenceShow/hide mRNA sequence
AGTGATACTGATGCCATTGGTGAACCACTGGAGGTGGATCCTTCAGAATCTTTTCAAATGCATGAGCAGAGTACCAATAAGCCCTGTAGATTGAGCGCTATTGGAAATTG
GCTTCAATGTCAACAAGTCATCAATGGAATCATATGTGGCAAGTGGCGCAGGGCTCCACTTTTTGAAGTCCAAACTGATGACTGGGAGTGCTTCTGCTCTATCCTATGGG
ATCCAACACATGCTGATTGTGCTGTACCTCAG
Protein sequenceShow/hide protein sequence
SDTDAIGEPLEVDPSESFQMHEQSTNKPCRLSAIGNWLQCQQVINGIICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQ