; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002222 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002222
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCadherin-4 like
Genome locationscaffold30:3336034..3338585
RNA-Seq ExpressionMS002222
SyntenyMS002222
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587735.1 hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia]2.3e-8286.74Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS+VLAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD+ELET+NE+ELEI+VK P STDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

XP_022135304.1 uncharacterized protein LOC111007300 [Momordica charantia]5.9e-9499.45Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSD+LAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

XP_022932487.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata]4.0e-8286.74Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS+VLAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD+ELET+NE+ELEI+VK P STDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

XP_022974211.1 uncharacterized protein LOC111472830 isoform X1 [Cucurbita maxima]5.2e-8286.74Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS+VLAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD ELET+NE+ELEI+VK P STDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

XP_023531265.1 uncharacterized protein LOC111793559 isoform X1 [Cucurbita pepo subsp. pepo]4.4e-8185.64Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSF  DS+VLAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+ RL PVD+ELET+NE+ELEI+VK P STDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

TrEMBL top hitse value%identityAlignment
A0A1S3BXC7 uncharacterized protein LOC1034942403.0e-7581.77Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MAR+ +LSQS + SKFQ     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQ+IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCL+FFAKESISG TRLAPVDTELET+N  ELEIDV+ P S DNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

A0A6J1C135 uncharacterized protein LOC1110073002.9e-9499.45Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSD+LAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

A0A6J1E5F5 uncharacterized protein LOC1114301021.0e-7580.66Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+ SQS + SK QS+P +L LLIPSSF LGHRNRSTRSGK KFIEIDLESSSFG DS+VLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCL+FFAK SISG+TRLAPVDTE + +NEVELEI+VK    TDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X11.9e-8286.74Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS+VLAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD+ELET+NE+ELEI+VK P STDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X12.5e-8286.74Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS+VLAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD ELET+NE+ELEI+VK P STDNSNQ E+
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein6.7e-1941.67Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-
        MAR  + S SL   +F ++    S L+PSS  +  R++S+ R G +   EID  ++S    SD L I+KL+D V +I V R+ PDW+PFVPG+S+WVPP 
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKES
           ++   +  L  KL  PLT EES S  ++ GWP  ++F K S
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKES

AT1G16840.3 unknown protein8.7e-1938.79Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-
        MAR  + S SL   +F ++    S L+PSS  +  R++S+ R G +   EID  ++S    SD L I+KL+D V +I V R+ PDW+PFVPG+S+WVPP 
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE
           ++   +  L  KL  PLT EES S  ++ GWP  ++F K       +   ++T+ ETT+  E
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE

AT1G16840.4 unknown protein8.7e-1938.79Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-
        MAR  + S SL   +F ++    S L+PSS  +  R++S+ R G +   EID  ++S    SD L I+KL+D V +I V R+ PDW+PFVPG+S+WVPP 
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE
           ++   +  L  KL  PLT EES S  ++ GWP  ++F K       +   ++T+ ETT+  E
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE

AT1G78890.1 unknown protein1.0e-2241.67Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHR----NRSTRSGKVKFI-EIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFW
        MAR L+ S SL   +F ++    SLL+PSS  +  R    NR + S  +  I EID+ +           + KL+D V +I+V RS PDW+PFVPG+SFW
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHR----NRSTRSGKVKFI-EIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFW

Query:  VPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAK
        VPP R++   +  L +KL  P++ EES S+++ RGWPC ++F K
Subjt:  VPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAK

AT2G19180.1 unknown protein7.6e-2341.46Show/hide
Query:  IEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTR
        IE++++S +   +++   ++KL++FV++IIV  STPDW+PF PGSSFWVPP +    K+ +L DK+  PLT+EES SL++  GWPC  FF          
Subjt:  IEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTR

Query:  LAPVDTELETTNEVELEIDVKAP
        + P D    +T E E  +++K P
Subjt:  LAPVDTELETTNEVELEIDVKAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGAATTCTGGCTCTCTCCCAATCCCTTCTCTGCTCCAAGTTTCAATCTTCCCCCTTCAGATTGTCGTTGTTGATTCCTTCTTCCTTTGCCCTGGGTCATCGGAA
CCGATCTACGCGTTCTGGCAAGGTCAAATTCATCGAGATTGACCTCGAATCGTCCTCTTTCGGCGGTGATTCCGATGTTCTAGCGATCAGGAAGCTGGACGACTTTGTGC
AGAAGATTATTGTCGAGCGATCGACTCCTGATTGGATTCCCTTTGTACCGGGTTCGTCTTTTTGGGTTCCTCCTCGCCGTAACAAGCCACGCAAGGTGGTCGACCTGTTC
GATAAATTGGTTGAACCACTCACCAAAGAGGAGTCTCCTTCCCTTGCTAACGCCCGTGGTTGGCCCTGTTTAGAATTTTTCGCTAAAGAGTCTATCTCTGGATCAACTCG
ATTGGCTCCGGTAGACACTGAGTTGGAAACCACAAATGAGGTGGAGTTGGAGATTGACGTGAAGGCACCAAAAAGTACAGATAACTCAAACCAACGCGAGGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACGAATTCTGGCTCTCTCCCAATCCCTTCTCTGCTCCAAGTTTCAATCTTCCCCCTTCAGATTGTCGTTGTTGATTCCTTCTTCCTTTGCCCTGGGTCATCGGAA
CCGATCTACGCGTTCTGGCAAGGTCAAATTCATCGAGATTGACCTCGAATCGTCCTCTTTCGGCGGTGATTCCGATGTTCTAGCGATCAGGAAGCTGGACGACTTTGTGC
AGAAGATTATTGTCGAGCGATCGACTCCTGATTGGATTCCCTTTGTACCGGGTTCGTCTTTTTGGGTTCCTCCTCGCCGTAACAAGCCACGCAAGGTGGTCGACCTGTTC
GATAAATTGGTTGAACCACTCACCAAAGAGGAGTCTCCTTCCCTTGCTAACGCCCGTGGTTGGCCCTGTTTAGAATTTTTCGCTAAAGAGTCTATCTCTGGATCAACTCG
ATTGGCTCCGGTAGACACTGAGTTGGAAACCACAAATGAGGTGGAGTTGGAGATTGACGTGAAGGCACCAAAAAGTACAGATAACTCAAACCAACGCGAGGAA
Protein sequenceShow/hide protein sequence
MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDVLAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRRNKPRKVVDLF
DKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKSTDNSNQREE