; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002233 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002233
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmyb-related transcription factor, partner of profilin-like
Genome locationscaffold30:3482737..3483812
RNA-Seq ExpressionMS002233
SyntenyMS002233
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11817.1 wiskott-Aldrich syndrome protein family member 2 [Cucumis melo var. makuwa]6.8e-4885.83Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVFESPKKV     V PPP QFDKS   AAV +GNASV+GFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
XP_022134561.1 uncharacterized protein LOC111006798 [Momordica charantia]5.2e-56100Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQ
        MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQ
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQ

Query:  WALDDYYENKGL
        WALDDYYENKGL
Subjt:  WALDDYYENKGL
XP_022930193.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata]8.9e-4885Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAA---VSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPPSTPSP S PQPVFESPKKV     V PPPQQFDKS +   V++GNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAA---VSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
XP_023530480.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo]5.2e-4885.83Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPPSTPSP S PQPVFESPKKV     V PPPQQFDKS   A V +GNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
XP_038878417.1 uncharacterized protein LOC120070657 [Benincasa hispida]1.5e-4784.17Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAAVS---DGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP+TPSP SQPQPVFESPKKV     V PPP QFDKS +V+   +GNASV+GFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAAVS---DGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
TrEMBL top hitse value%identityAlignment
A0A0A0LUN3 Uncharacterized protein7.3e-4885Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQP+FESPKKV     V PPP QFDKS   AAV +GNASV+GFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
A0A5D3CIQ6 Wiskott-Aldrich syndrome protein family member 23.3e-4885.83Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVFESPKKV     V PPP QFDKS   AAV +GNASV+GFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKS---AAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
A0A6J1BZY2 uncharacterized protein LOC1110067982.5e-56100Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQ
        MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQ
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQ

Query:  WALDDYYENKGL
        WALDDYYENKGL
Subjt:  WALDDYYENKGL
A0A6J1EQV9 myb-related transcription factor, partner of profilin-like4.3e-4885Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAA---VSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPPSTPSP S PQPVFESPKKV     V PPPQQFDKS +   V++GNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAA---VSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
A0A6J1KZL1 myb-related transcription factor, partner of profilin-like4.3e-4885Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAA---VSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPPSTPSP S PQPVFESPKKV     V PPPQQFDKS +   V++GNASVAGFFRNAVSKVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV-----VLPPPQQFDKSAA---VSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYENKGL
        GLNQSKYQWALDDYYE+KG+
Subjt:  GLNQSKYQWALDDYYENKGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G18910.1 hydroxyproline-rich glycoprotein family protein1.4e-3871.68Show/hide
Query:  MPINSE-STPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV--VLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQS
        MPIN + STPPP+IGKIGPYTVFMTPP+TP P   P  V + P     VLPPPQQF KS A SD + SV GFF+NAV+KVQNAHSS+DDHL RWFGLNQS
Subjt:  MPINSE-STPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKV--VLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQS

Query:  KYQWALDDYYENK
        KYQWALD+YYE+K
Subjt:  KYQWALDDYYENK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATCAATAGCGAATCCACGCCGCCTCCGCTGATCGGAAAAATTGGGCCCTACACCGTCTTCATGACCCCGCCCTCCACCCCTTCGCCGGTCTCTCAGCCTCAGCC
GGTGTTCGAGTCCCCGAAGAAGGTTGTTCTGCCGCCGCCTCAGCAGTTCGATAAGTCTGCTGCTGTGTCTGATGGGAATGCGTCCGTCGCCGGATTCTTCAGAAATGCAG
TCTCCAAAGTGCAGAATGCACATTCAAGCTTGGATGACCATTTGGCACGCTGGTTCGGGTTGAATCAATCCAAGTACCAGTGGGCACTAGATGATTATTATGAGAACAAG
GGATTG
mRNA sequenceShow/hide mRNA sequence
ATGCCTATCAATAGCGAATCCACGCCGCCTCCGCTGATCGGAAAAATTGGGCCCTACACCGTCTTCATGACCCCGCCCTCCACCCCTTCGCCGGTCTCTCAGCCTCAGCC
GGTGTTCGAGTCCCCGAAGAAGGTTGTTCTGCCGCCGCCTCAGCAGTTCGATAAGTCTGCTGCTGTGTCTGATGGGAATGCGTCCGTCGCCGGATTCTTCAGAAATGCAG
TCTCCAAAGTGCAGAATGCACATTCAAGCTTGGATGACCATTTGGCACGCTGGTTCGGGTTGAATCAATCCAAGTACCAGTGGGCACTAGATGATTATTATGAGAACAAG
GGATTG
Protein sequenceShow/hide protein sequence
MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLPPPQQFDKSAAVSDGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQWALDDYYENK
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