; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002238 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002238
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReplication protein A 32 kDa subunit B-like
Genome locationscaffold30:3540083..3544547
RNA-Seq ExpressionMS002238
SyntenyMS002238
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453602.1 PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]1.4e-13280.97Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEIT+HFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD
        LRKQ  SSMTTQPQMTNLSN+P+KGYQA  +NQY+GQ  GGD WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTD
Subjt:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD

Query:  DYHFKSTANG
        DYHFKSTANG
Subjt:  DYHFKSTANG

XP_022135425.1 replication protein A 32 kDa subunit B isoform X1 [Momordica charantia]8.4e-14988.67Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLN FS                                 RSVTDYNEITSHFIECIYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
        LRKQHSSMTT+PQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
Subjt:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD

Query:  YHFKSTANG
        YHFKSTANG
Subjt:  YHFKSTANG

XP_022922072.1 replication protein A 32 kDa subunit B-like isoform X2 [Cucurbita moschata]1.9e-13279.94Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEITSHFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
        LR+Q SSMT QPQM NLSN+P++GYQ   SNQY+GQ  GGD WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+LNVP+EKL+PAMKNLEEEGLIYSTTDD
Subjt:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD

Query:  YHFKSTANG
        YHFKSTANG
Subjt:  YHFKSTANG

XP_023516913.1 replication protein A 32 kDa subunit B-like isoform X2 [Cucurbita pepo subsp. pepo]1.4e-13280.26Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEITSHFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
        LR+Q SSMT QPQM NLSN+P++GYQ   SNQYSGQ  GGD WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+L VP+EKL+PAMKNLEEEGLIYSTTDD
Subjt:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD

Query:  YHFKSTANG
        YHFKSTANG
Subjt:  YHFKSTANG

XP_038880298.1 replication protein A 32 kDa subunit B [Benincasa hispida]1.9e-13280.91Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTG ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEITSHFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
        LRKQ  S  TQPQM NLSN+PMKGYQA  SNQY+GQ  GGD WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTDD
Subjt:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD

Query:  YHFKSTANG
        YHFKSTANG
Subjt:  YHFKSTANG

TrEMBL top hitse value%identityAlignment
A0A1S4DZE3 replication protein A 32 kDa subunit B-like7.0e-13380.97Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEIT+HFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD
        LRKQ  SSMTTQPQMTNLSN+P+KGYQA  +NQY+GQ  GGD WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTD
Subjt:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD

Query:  DYHFKSTANG
        DYHFKSTANG
Subjt:  DYHFKSTANG

A0A5D3CIS3 Replication protein A 32 kDa subunit B-like7.0e-13380.97Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEIT+HFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD
        LRKQ  SSMTTQPQMTNLSN+P+KGYQA  +NQY+GQ  GGD WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTD
Subjt:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD

Query:  DYHFKSTANG
        DYHFKSTANG
Subjt:  DYHFKSTANG

A0A6J1C122 replication protein A 32 kDa subunit B isoform X14.1e-14988.67Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLN FS                                 RSVTDYNEITSHFIECIYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
        LRKQHSSMTT+PQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
Subjt:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD

Query:  YHFKSTANG
        YHFKSTANG
Subjt:  YHFKSTANG

A0A6J1E235 replication protein A 32 kDa subunit B-like isoform X29.1e-13379.94Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEITSHFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD
        LR+Q SSMT QPQM NLSN+P++GYQ   SNQY+GQ  GGD WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+LNVP+EKL+PAMKNLEEEGLIYSTTDD
Subjt:  LRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDD

Query:  YHFKSTANG
        YHFKSTANG
Subjt:  YHFKSTANG

A0A6J1E347 replication protein A 32 kDa subunit B-like isoform X15.9e-13280Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLN FS                                 R VTDYNEITSHFIE IYVHFYNTR
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD
        LRKQ  SSMT QPQM NLSN+P++GYQ   SNQY+GQ  GGD WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+LNVP+EKL+PAMKNLEEEGLIYSTTD
Subjt:  LRKQH-SSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTD

Query:  DYHFKSTANG
        DYHFKSTANG
Subjt:  DYHFKSTANG

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C2.6e-1528.92Show/hide
Query:  FSGGGFMPSQTT--QAPDHSL---------SPAKNRD--VQALLPLTVKQINDAF---LSNDDKSS--FVINGVDVNNVKLVGMVSNRAGRITDVTFALD
        FSG   MPSQ +   AP++S          SP+K RD      +P TV  I+ +F   L+ D      F I+GV+  NV+++G V +   R TDV F LD
Subjt:  FSGGGFMPSQTT--QAPDHSL---------SPAKNRD--VQALLPLTVKQINDAF---LSNDDKSS--FVINGVDVNNVKLVGMVSNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLA--CRSVTDYNEITSHFIEC
        D TG+I   +W+ + +D+ +   I +G+YV+V  +L  FQ K                                   Q LA   R + ++NE+  HFIEC
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLA--CRSVTDYNEITSHFIEC

Query:  IYVHFYNTRLRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGG
        ++VH  + + + Q   +    Q    ++ P  G        ++ QV  G
Subjt:  IYVHFYNTRLRKQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGG

Q6H7J5 Replication protein A 32 kDa subunit B4.5e-4434.06Show/hide
Query:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSLSPA----KNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALD
        G  +DG     ++ F GGGFMPSQ T A + +        K+R+ QALLPLTVKQI DA  +NDDKS+F +NG++V+ V+LVG + N+  R+TDV+F LD
Subjt:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSLSPA----KNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIY
        DGTGR+  ++W N++ D+ E+  I +G YV V+G LK FQGK  +  +S                                 R +T++N++T HF+ C++
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIY

Query:  VHFYNTRLRKQ-HSSMTTQPQMTNLSNSPMKGYQAASSNQ---YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLE
        VH   TR + Q +++  T      +    M   Q+  +NQ   +S     G     ++ ++  F      + + G   D +++ LN+P E +   + +  
Subjt:  VHFYNTRLRKQ-HSSMTTQPQMTNLSNSPMKGYQAASSNQ---YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLE

Query:  EEGLIYSTTDDYHFKSTANG
        + G +Y+T DD+H+KST NG
Subjt:  EEGLIYSTTDDYHFKSTANG

Q6K9U2 Replication protein A 32 kDa subunit A1.2e-3634.21Show/hide
Query:  AFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDA---FLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRIDCSKWVNE
        AFS   F  SQ   A   S +P+K+R   + +PLTVKQI++A    ++ +  + FV++GV+  NV+LVG+VS +  R TDV+F +DDGTGR+D  +WVN+
Subjt:  AFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDA---FLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRIDCSKWVNE

Query:  AADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS
         ADS E   + +GMYV V G LK  Q +     F                                A R VTDYNE+T HFI+C+ +H  NT+ +    +
Subjt:  AADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS

Query:  MTTQPQMTNLSN--SPMKGYQAASSNQYSG-QVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK
         T     ++ SN  S M    +  SN      V  G +     +++  F +  + ++E G H D I +   +P  K+  A+  L + G IYST D+ H+K
Subjt:  MTTQPQMTNLSN--SPMKGYQAASSNQYSG-QVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK

Query:  STAN
        S  N
Subjt:  STAN

Q8LFJ8 Replication protein A 32 kDa subunit B1.4e-6143.45Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S   +S+F I+GVD+  V +VG +S    RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        C +W +   ++ E+E +  GMYVR+HGHLK FQGK ++N FS                                 R VTD+NEI  HF EC+YVH YNT+
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRK---QHSSMTTQPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIY
        LR       + T +PQM  +   +P K YQ   SNQ+  Q    D    ++Q VL++L  P    +E G H D+IA+ L +P+ ++  A++ L  +G IY
Subjt:  LRK---QHSSMTTQPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIY

Query:  STTDDYHFKSTAN
        ST D+  FKSTAN
Subjt:  STTDDYHFKSTAN

Q9ZQ19 Replication protein A 32 kDa subunit A2.4e-6142.57Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F S+ +KS  VING+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLR
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGKT L  FS                                 R + D+NE+T H+IECI+ +  N+  +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLR

Query:  KQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDY
        +Q     TQ   T              +   S Q   G+  K+L+ M+LD+L+ P+C   ++G H D IAQ L +P  KL   +++LE +GLIYST D+Y
Subjt:  KQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDY

Query:  HFK
        HFK
Subjt:  HFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A21.7e-6242.57Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F S+ +KS  VING+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLR
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGKT L  FS                                 R + D+NE+T H+IECI+ +  N+  +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLR

Query:  KQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDY
        +Q     TQ   T              +   S Q   G+  K+L+ M+LD+L+ P+C   ++G H D IAQ L +P  KL   +++LE +GLIYST D+Y
Subjt:  KQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDY

Query:  HFK
        HFK
Subjt:  HFK

AT2G24490.2 replicon protein A21.7e-6242.57Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F S+ +KS  VING+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLR
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGKT L  FS                                 R + D+NE+T H+IECI+ +  N+  +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLR

Query:  KQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDY
        +Q     TQ   T              +   S Q   G+  K+L+ M+LD+L+ P+C   ++G H D IAQ L +P  KL   +++LE +GLIYST D+Y
Subjt:  KQHSSMTTQPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDY

Query:  HFK
        HFK
Subjt:  HFK

AT3G02920.1 Replication protein A, subunit RPA329.9e-6343.45Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S   +S+F I+GVD+  V +VG +S    RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR
        C +W +   ++ E+E +  GMYVR+HGHLK FQGK ++N FS                                 R VTD+NEI  HF EC+YVH YNT+
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTR

Query:  LRK---QHSSMTTQPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIY
        LR       + T +PQM  +   +P K YQ   SNQ+  Q    D    ++Q VL++L  P    +E G H D+IA+ L +P+ ++  A++ L  +G IY
Subjt:  LRK---QHSSMTTQPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIY

Query:  STTDDYHFKSTAN
        ST D+  FKSTAN
Subjt:  STTDDYHFKSTAN

AT3G02920.2 Replication protein A, subunit RPA321.3e-5942.04Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHS---------------LSPAK----NRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSN
        MYG  FDGNAAF+GGGFMPSQ TTQA + S               +S AK    NRDV+ LLPLT+KQ++ A  S   +S+F I+GVD+  V +VG +S 
Subjt:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHS---------------LSPAK----NRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSN

Query:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTD
           RIT V F +DDGTG +DC +W +   ++ E+E +  GMYVR+HGHLK FQGK ++N FS                                 R VTD
Subjt:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTD

Query:  YNEITSHFIECIYVHFYNTRLRK---QHSSMTTQPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLN
        +NEI  HF EC+YVH YNT+LR       + T +PQM  +   +P K YQ   SNQ+  Q    D    ++Q VL++L  P    +E G H D+IA+ L 
Subjt:  YNEITSHFIECIYVHFYNTRLRK---QHSSMTTQPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLN

Query:  VPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
        +P+ ++  A++ L  +G IYST D+  FKSTAN
Subjt:  VPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGAAGTCAATTCGATGGCAACGCTGCCTTCTCCGGTGGCGGATTCATGCCATCTCAGACCACCCAGGCCCCTGATCATTCCTTATCTCCGGCGAAAAATAGAGA
TGTCCAAGCGTTGCTTCCATTAACGGTGAAGCAGATAAATGATGCATTCCTGTCTAATGATGATAAATCAAGCTTTGTCATTAATGGTGTTGATGTTAATAATGTTAAGC
TTGTAGGGATGGTGAGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACAGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCAGCAGAT
TCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTTCGGGTCCATGGCCACTTGAAAAGCTTTCAGGGTAAAACAACTTTAAATTTCTTTTCTACCTCAAAATTTCC
CTGTGGTGCTTGTTCTCTGTTACTTGTGTACTTGATATCTATAACGTTGCTGCATTGGAGTTTTGACATACAATATTTGGCTTGCAGGTCTGTTACCGACTATAATGAGA
TCACAAGTCACTTCATAGAATGCATATATGTTCATTTCTACAACACCAGGTTACGGAAACAACATAGTAGTATGACTACTCAGCCACAAATGACAAATTTATCTAATTCG
CCTATGAAAGGATATCAAGCTGCCTCTTCAAATCAATACTCTGGTCAAGTAGGAGGTGGTGATCGTTGGAAAAGCCTTGAGCAGATGGTCTTAGATTTTTTGCAACTTCC
TTCATGCGATACTGAGAGGGGGGCACACCGTGATGTCATTGCACAAAATCTCAATGTTCCAATGGAAAAGCTCATCCCAGCAATGAAAAATCTTGAAGAGGAAGGCCTAA
TCTACTCAACAACTGATGATTACCACTTCAAATCAACTGCCAATGGT
mRNA sequenceShow/hide mRNA sequence
ATGTATGGAAGTCAATTCGATGGCAACGCTGCCTTCTCCGGTGGCGGATTCATGCCATCTCAGACCACCCAGGCCCCTGATCATTCCTTATCTCCGGCGAAAAATAGAGA
TGTCCAAGCGTTGCTTCCATTAACGGTGAAGCAGATAAATGATGCATTCCTGTCTAATGATGATAAATCAAGCTTTGTCATTAATGGTGTTGATGTTAATAATGTTAAGC
TTGTAGGGATGGTGAGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACAGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCAGCAGAT
TCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTTCGGGTCCATGGCCACTTGAAAAGCTTTCAGGGTAAAACAACTTTAAATTTCTTTTCTACCTCAAAATTTCC
CTGTGGTGCTTGTTCTCTGTTACTTGTGTACTTGATATCTATAACGTTGCTGCATTGGAGTTTTGACATACAATATTTGGCTTGCAGGTCTGTTACCGACTATAATGAGA
TCACAAGTCACTTCATAGAATGCATATATGTTCATTTCTACAACACCAGGTTACGGAAACAACATAGTAGTATGACTACTCAGCCACAAATGACAAATTTATCTAATTCG
CCTATGAAAGGATATCAAGCTGCCTCTTCAAATCAATACTCTGGTCAAGTAGGAGGTGGTGATCGTTGGAAAAGCCTTGAGCAGATGGTCTTAGATTTTTTGCAACTTCC
TTCATGCGATACTGAGAGGGGGGCACACCGTGATGTCATTGCACAAAATCTCAATGTTCCAATGGAAAAGCTCATCCCAGCAATGAAAAATCTTGAAGAGGAAGGCCTAA
TCTACTCAACAACTGATGATTACCACTTCAAATCAACTGCCAATGGT
Protein sequenceShow/hide protein sequence
MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRIDCSKWVNEAAD
SNEVEGILDGMYVRVHGHLKSFQGKTTLNFFSTSKFPCGACSLLLVYLISITLLHWSFDIQYLACRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTQPQMTNLSNS
PMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG