; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002250 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002250
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF761 domain-containing protein
Genome locationscaffold30:3616308..3616676
RNA-Seq ExpressionMS002250
SyntenyMS002250
Gene Ontology termsGO:0071456 - cellular response to hypoxia (biological process)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135293.1 uncharacterized protein LOC111007290 [Momordica charantia]1.7e-6099.19Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIE
        MAGSSLLGRLRKAV+KVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIE
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIE

Query:  RQVSLELQYCRGNSFNNHLLISP
        RQVSLELQYCRGNSFNNHLLISP
Subjt:  RQVSLELQYCRGNSFNNHLLISP

XP_022921804.1 uncharacterized protein LOC111429947 [Cucurbita moschata]1.4e-4173.23Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ
        MA +SLLGRLRKAV+K++F++ F+IQSWRLAAM+GRTSSRNLRLSFNE PGLK C EDI ESS+H +     GLQRT SYASEDDVDKRA+ FIANFYRQ
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ

Query:  LQIERQVSLELQYCRGNSFNNHLLISP
        L+IERQVSLEL+YCRG+S +  L++SP
Subjt:  LQIERQVSLELQYCRGNSFNNHLLISP

XP_022987374.1 uncharacterized protein LOC111484948 [Cucurbita maxima]1.6e-4274.8Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ
        MA +SLLGRLR AV+K++FM+ F+IQSWRLAAM+GRTSSRNLRLSFNE PGLK C EDI ESS+H +     GLQRT SYASEDDVDKRA+ FIANFYRQ
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ

Query:  LQIERQVSLELQYCRGNSFNNHLLISP
        L+IERQVSLELQYCRGNS +  L++SP
Subjt:  LQIERQVSLELQYCRGNSFNNHLLISP

XP_023515447.1 uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo]1.5e-4376.98Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQH---YSPGLQRTASYASEDDVDKRADMFIANFYRQL
        MA +SLLGRLRKAV+K++FM+ F+IQSWRLAAM+GRTSSRNLRLSFNE PGLK C EDI ESS+H    S GLQRT SYASEDDVDKRA+ FIANFYRQL
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQH---YSPGLQRTASYASEDDVDKRADMFIANFYRQL

Query:  QIERQVSLELQYCRGNSFNNHLLISP
        +IERQVSLEL+YCRGNSF   L++SP
Subjt:  QIERQVSLELQYCRGNSFNNHLLISP

XP_038879799.1 uncharacterized protein LOC120071543 [Benincasa hispida]3.5e-4582.26Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTED-ITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQI
        MA SS+L RLRKAVKK++FM+NFSIQSWRLAAM+GRTSSRNLRLSFNERPGL ACTED I E S   S GLQRT SYASEDDVDKRA+ FIANFYRQL+I
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTED-ITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQI

Query:  ERQVSLELQYCRGNSFNNHLLISP
        ERQVSLELQYCRGNSFN  L+ISP
Subjt:  ERQVSLELQYCRGNSFNNHLLISP

TrEMBL top hitse value%identityAlignment
A0A0A0LUK4 Uncharacterized protein8.6e-4278.33Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDI----TESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQ
        M   SLLGRLRKAVKK+RFM+NFSIQ WRLAAM+GRTSSRNLRLSF ERPGLKAC+EDI     +S    S GLQRT SYASEDDVD RA+ FIANFYRQ
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDI----TESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQ

Query:  LQIERQVSLELQYCRGNSFN
        L+IERQVSLELQYCRGNSF+
Subjt:  LQIERQVSLELQYCRGNSFN

A0A5D3CK96 DUF761 domain-containing protein1.1e-3977.5Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLK-ACTEDI---TESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQ
        M   SLLGRLRKAVKK++FM+NFSIQ WRLAAM+GRTSSRNLRLSFNERPGLK AC+EDI    E     S GLQRT SYASEDDVD RA+ FIANFYRQ
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLK-ACTEDI---TESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQ

Query:  LQIERQVSLELQYCRGNSFN
        L+IERQVSLELQYCR NSF+
Subjt:  LQIERQVSLELQYCRGNSFN

A0A6J1C4F5 uncharacterized protein LOC1110072908.3e-6199.19Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIE
        MAGSSLLGRLRKAV+KVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIE
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIE

Query:  RQVSLELQYCRGNSFNNHLLISP
        RQVSLELQYCRGNSFNNHLLISP
Subjt:  RQVSLELQYCRGNSFNNHLLISP

A0A6J1E1K7 uncharacterized protein LOC1114299476.6e-4273.23Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ
        MA +SLLGRLRKAV+K++F++ F+IQSWRLAAM+GRTSSRNLRLSFNE PGLK C EDI ESS+H +     GLQRT SYASEDDVDKRA+ FIANFYRQ
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ

Query:  LQIERQVSLELQYCRGNSFNNHLLISP
        L+IERQVSLEL+YCRG+S +  L++SP
Subjt:  LQIERQVSLELQYCRGNSFNNHLLISP

A0A6J1JIQ4 uncharacterized protein LOC1114849487.8e-4374.8Show/hide
Query:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ
        MA +SLLGRLR AV+K++FM+ F+IQSWRLAAM+GRTSSRNLRLSFNE PGLK C EDI ESS+H +     GLQRT SYASEDDVDKRA+ FIANFYRQ
Subjt:  MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSP----GLQRTASYASEDDVDKRADMFIANFYRQ

Query:  LQIERQVSLELQYCRGNSFNNHLLISP
        L+IERQVSLELQYCRGNS +  L++SP
Subjt:  LQIERQVSLELQYCRGNSFNNHLLISP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein1.3e-2657.14Show/hide
Query:  SLLGRLRKAVKKVRFMINFSIQS-WRLAAMMG-RTSSRNLRLSFNERPGLKAC-TEDITESSQHYSPGLQRTASY--ASEDDVDKRADMFIANFYRQLQI
        SLL RLR+AV KV+F+++F I S W L  M+G  +SS +LRLSFN+RPGL A  TE+  +S+      L RT SY  +S++D+D +A+MFIANFYRQL+I
Subjt:  SLLGRLRKAVKKVRFMINFSIQS-WRLAAMMG-RTSSRNLRLSFNERPGLKAC-TEDITESSQHYSPGLQRTASY--ASEDDVDKRADMFIANFYRQLQI

Query:  ERQVSLELQYCRGN--SFN
        ERQ+SLEL+YC+GN  SFN
Subjt:  ERQVSLELQYCRGN--SFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGGAGTAGCTTGCTGGGAAGGCTGCGGAAGGCGGTGAAGAAGGTGAGATTTATGATAAACTTCAGCATCCAAAGCTGGCGGTTGGCGGCCATGATGGGGCGGAC
TTCGTCGAGAAATCTACGGCTGAGCTTCAACGAACGGCCAGGATTGAAGGCCTGCACCGAAGATATTACGGAATCATCTCAACACTACTCTCCAGGGCTGCAGAGAACTG
CCAGCTATGCTTCCGAAGATGACGTGGACAAGCGGGCGGATATGTTTATAGCTAATTTCTACCGGCAGCTTCAGATCGAGCGCCAGGTGTCGCTGGAGCTTCAGTACTGC
CGTGGGAATAGCTTCAACAACCACCTCCTAATTTCTCCT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGGAGTAGCTTGCTGGGAAGGCTGCGGAAGGCGGTGAAGAAGGTGAGATTTATGATAAACTTCAGCATCCAAAGCTGGCGGTTGGCGGCCATGATGGGGCGGAC
TTCGTCGAGAAATCTACGGCTGAGCTTCAACGAACGGCCAGGATTGAAGGCCTGCACCGAAGATATTACGGAATCATCTCAACACTACTCTCCAGGGCTGCAGAGAACTG
CCAGCTATGCTTCCGAAGATGACGTGGACAAGCGGGCGGATATGTTTATAGCTAATTTCTACCGGCAGCTTCAGATCGAGCGCCAGGTGTCGCTGGAGCTTCAGTACTGC
CGTGGGAATAGCTTCAACAACCACCTCCTAATTTCTCCT
Protein sequenceShow/hide protein sequence
MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIERQVSLELQYC
RGNSFNNHLLISP