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MS002324 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002324
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:4155346..4155752
RNA-Seq ExpressionMS002324
SyntenyMS002324
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035098.1 uncharacterized protein E6C27_scaffold57G001730 [Cucumis melo var. makuwa]6.6e-1355.56Show/hide
Query:  KLGLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTK---DLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKS
        K GL+IL L SI     LP C   ETNFT K +D + +QLKQGRP K   DL+G    SEE   GA    +MRA+ VYGGA+D+  G SKNDA SLRIKS
Subjt:  KLGLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTK---DLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKS

Query:  ISSSFWEV
        ISS  W+V
Subjt:  ISSSFWEV

KGN65174.1 hypothetical protein Csa_019558 [Cucumis sativus]4.6e-1454.29Show/hide
Query:  KLGLIILLLISIDL--SLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISS
        K GL++L L SI     LP C   ETNFT K +D + +QLKQGRP KD++     SEE   GA    +MRA+ VYGGA+D+  GHSKNDA SL IKSISS
Subjt:  KLGLIILLLISIDL--SLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISS

Query:  SFWEV
          W+V
Subjt:  SFWEV

XP_022135488.1 uncharacterized protein LOC111007432 [Momordica charantia]7.7e-4698.08Show/hide
Query:  SKLGLIILLLISIDLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSS
        SKLGLIILLLISIDLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGA AGKMMRARGVYGGASDMRRGHSKNDATSLRIKSI SS
Subjt:  SKLGLIILLLISIDLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSS

Query:  FWEV
        FWEV
Subjt:  FWEV

XP_022921746.1 uncharacterized protein LOC111429900 [Cucurbita moschata]1.1e-1256.31Show/hide
Query:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF
        G  +LLLIS+     LP C S E +FT K  D YK  LKQGRP KDL+    +S++   GA A K+MRARGVYGG +D+ RGHSKNDA  LRIKS SS  
Subjt:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF

Query:  WEV
        W+V
Subjt:  WEV

XP_022988599.1 uncharacterized protein LOC111485797 [Cucurbita maxima]1.5e-1257.28Show/hide
Query:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF
        G  +LLLIS+     LP C S E  FT K  D YK  LKQGRP KDL+     SE+   GA A ++MRARGVYGG +D+ RGHSKNDA  LRIKS SS  
Subjt:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF

Query:  WEV
        WEV
Subjt:  WEV

TrEMBL top hitse value%identityAlignment
A0A0A0LW17 Uncharacterized protein2.2e-1454.29Show/hide
Query:  KLGLIILLLISIDL--SLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISS
        K GL++L L SI     LP C   ETNFT K +D + +QLKQGRP KD++     SEE   GA    +MRA+ VYGGA+D+  GHSKNDA SL IKSISS
Subjt:  KLGLIILLLISIDL--SLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISS

Query:  SFWEV
          W+V
Subjt:  SFWEV

A0A5A7SWW6 Uncharacterized protein3.2e-1355.56Show/hide
Query:  KLGLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTK---DLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKS
        K GL+IL L SI     LP C   ETNFT K +D + +QLKQGRP K   DL+G    SEE   GA    +MRA+ VYGGA+D+  G SKNDA SLRIKS
Subjt:  KLGLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTK---DLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKS

Query:  ISSSFWEV
        ISS  W+V
Subjt:  ISSSFWEV

A0A6J1C4Y5 uncharacterized protein LOC1110074323.7e-4698.08Show/hide
Query:  SKLGLIILLLISIDLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSS
        SKLGLIILLLISIDLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGA AGKMMRARGVYGGASDMRRGHSKNDATSLRIKSI SS
Subjt:  SKLGLIILLLISIDLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSS

Query:  FWEV
        FWEV
Subjt:  FWEV

A0A6J1E284 uncharacterized protein LOC1114299005.4e-1356.31Show/hide
Query:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF
        G  +LLLIS+     LP C S E +FT K  D YK  LKQGRP KDL+    +S++   GA A K+MRARGVYGG +D+ RGHSKNDA  LRIKS SS  
Subjt:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF

Query:  WEV
        W+V
Subjt:  WEV

A0A6J1JM10 uncharacterized protein LOC1114857977.1e-1357.28Show/hide
Query:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF
        G  +LLLIS+     LP C S E  FT K  D YK  LKQGRP KDL+     SE+   GA A ++MRARGVYGG +D+ RGHSKNDA  LRIKS SS  
Subjt:  GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSF

Query:  WEV
        WEV
Subjt:  WEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAAATTAGGACTAATAATTTTGCTCCTCATCTCCATTGATCTCTCCCTCCCAATTTGCCATTCAGCTGAAACCAATTTCACCATCAAACCTGAGGATCTCTATAAGCA
GCAGCTGAAACAGGGGAGACCTACAAAAGATTTAGAGGGCGAGAGGAAGGAGAGTGAAGAAACAGGCGCCGGAGCTAAGGCGGGGAAGATGATGAGAGCGAGAGGAGTGT
ACGGCGGCGCGAGCGACATGCGGCGGGGACACTCGAAGAACGACGCTACCTCTCTACGGATTAAATCAATTTCTTCATCGTTTTGGGAAGTT
mRNA sequenceShow/hide mRNA sequence
AGCAAATTAGGACTAATAATTTTGCTCCTCATCTCCATTGATCTCTCCCTCCCAATTTGCCATTCAGCTGAAACCAATTTCACCATCAAACCTGAGGATCTCTATAAGCA
GCAGCTGAAACAGGGGAGACCTACAAAAGATTTAGAGGGCGAGAGGAAGGAGAGTGAAGAAACAGGCGCCGGAGCTAAGGCGGGGAAGATGATGAGAGCGAGAGGAGTGT
ACGGCGGCGCGAGCGACATGCGGCGGGGACACTCGAAGAACGACGCTACCTCTCTACGGATTAAATCAATTTCTTCATCGTTTTGGGAAGTT
Protein sequenceShow/hide protein sequence
SKLGLIILLLISIDLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETGAGAKAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSISSSFWEV