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MS002325 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002325
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0057 membrane protein
Genome locationscaffold30:4158374..4158701
RNA-Seq ExpressionMS002325
SyntenyMS002325
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQP98405.1 UPF0057 membrane protein [Prunus yedoensis var. nudiflora]1.6e-3293.15Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYV
        MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGYIPGIIYALYAIVF+DRD+YFDEYRRPLYV
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYV

XP_004146673.1 UPF0057 membrane protein At4g30660 [Cucumis sativus]1.2e-3293.33Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR++YFDEYRRPLY  A
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

XP_008443846.1 PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]3.2e-3394.67Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDRD+YFDEYRRPLY  A
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

XP_022135490.1 UPF0057 membrane protein At4g30660-like [Momordica charantia]5.8e-35100Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

XP_038879686.1 UPF0057 membrane protein At4g30660-like [Benincasa hispida]1.6e-3293.33Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGY+PGIIYALYAIVFIDRD+YFDEYRRPLY  A
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

TrEMBL top hitse value%identityAlignment
A0A0A0LTR2 Uncharacterized protein5.8e-3393.33Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR++YFDEYRRPLY  A
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

A0A1S3B9R0 UPF0057 membrane protein At4g306601.5e-3394.67Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDRD+YFDEYRRPLY  A
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

A0A314Z9A4 UPF0057 membrane protein7.6e-3393.15Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYV
        MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGYIPGIIYALYAIVF+DRD+YFDEYRRPLYV
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYV

A0A6J1C169 UPF0057 membrane protein At4g30660-like2.8e-35100Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

A0A6P5SJT5 UPF0057 membrane protein At4g30660-like2.2e-3293.06Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY
        MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGYIPGIIYALYAIVF+DRD+YFDEYRRPLY
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B3.0e-1076.09Show/hide
Query:  EILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAI
        +ILIAI++PPLGV L+ G C  EF ICLLLTFLGYIPGIIYA+YAI
Subjt:  EILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAI

O82232 UPF0057 membrane protein At2g240405.4e-2874.67Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ RD+YFDEYRRP+Y +A
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

Q9LRI7 Hydrophobic protein OSR87.9e-1968.75Show/hide
Query:  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEY
        RC  F EIL+AI++PPLGV LR GCC++EFCICLLLT LGY+PGIIYA+Y +V +D DQY  EY
Subjt:  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEY

Q9M095 UPF0057 membrane protein At4g306504.2e-2077.05Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRD
        M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGYIPGIIYALY IVF +R+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRD

Q9SUI0 UPF0057 membrane protein At4g306602.1e-2776.39Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY
        MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGY+PGIIYA+Y IVF  R++YFDEYRRP+Y
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family3.9e-2974.67Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA
        M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ RD+YFDEYRRP+Y +A
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

AT4G28088.1 Low temperature and salt responsive protein family3.5e-3080.56Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY
        M + CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT LGY+PGIIYALYAIV++DRDQ+FDEYRRPL+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY

AT4G30650.1 Low temperature and salt responsive protein family3.0e-2177.05Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRD
        M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGYIPGIIYALY IVF +R+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRD

AT4G30660.1 Low temperature and salt responsive protein family1.5e-2876.39Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY
        MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGY+PGIIYA+Y IVF  R++YFDEYRRP+Y
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY

AT4G30660.2 Low temperature and salt responsive protein family1.5e-2876.39Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY
        MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGY+PGIIYA+Y IVF  R++YFDEYRRP+Y
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTCGCTGCGAGATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGTACTGTTGAGTTTTGTATATGCCT
TCTCTTGACGTTTCTCGGTTATATTCCTGGAATAATCTACGCCTTGTATGCCATCGTTTTCATTGATCGCGATCAGTACTTCGATGAATATAGGCGTCCTCTGTATGTGC
TGGCC
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTCGCTGCGAGATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGTACTGTTGAGTTTTGTATATGCCT
TCTCTTGACGTTTCTCGGTTATATTCCTGGAATAATCTACGCCTTGTATGCCATCGTTTTCATTGATCGCGATCAGTACTTCGATGAATATAGGCGTCCTCTGTATGTGC
TGGCC
Protein sequenceShow/hide protein sequence
MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA