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MS002333 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002333
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein sumv-1 like
Genome locationscaffold30:4187399..4187635
RNA-Seq ExpressionMS002333
SyntenyMS002333
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035091.1 putative transmembrane protein [Cucumis melo var. makuwa]2.1e-2777.91Show/hide
Query:  MAGSQQMN-------GPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT
        M GSQQ+N       GPSPAQHTTEVL QRKKLPVCPM+MA+GGF IAATLGYFVL TKKKPEASALDVAKVT G++TP+NT PRT
Subjt:  MAGSQQMN-------GPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT

KAE8126076.1 hypothetical protein FH972_020822 [Carpinus fangiana]2.9e-2169.74Show/hide
Query:  GSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR
        G++ M GPSP QH+TEVL QR+KLP CPM+MA+GGF I A LGY VL +KKKPEASA DVAKV  GV+ PENT PR
Subjt:  GSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR

KAG2717864.1 hypothetical protein I3760_03G194000 [Carya illinoinensis]2.9e-2167.11Show/hide
Query:  GSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR
        G++ M GPSP QH+TE L QR+KLP CPM+MA+GGF I ATL YF+L +KKKPEASA+DVAKV  GV+ P+NT PR
Subjt:  GSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR

PQP98417.1 hypothetical protein Pyn_22000 [Prunus yedoensis var. nudiflora]8.5e-2168.83Show/hide
Query:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR
        AG+Q M GPSPAQH+TEVL Q  KL  CPM+MA+GGF +  T+GYF L TKKKPEASALDVAKV  G + PENT PR
Subjt:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR

XP_022134574.1 uncharacterized protein LOC111006810 [Momordica charantia]4.6e-35100Show/hide
Query:  MAGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT
        MAGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT
Subjt:  MAGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT

TrEMBL top hitse value%identityAlignment
A0A314XVK0 Uncharacterized protein7.0e-2168.83Show/hide
Query:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR
        AG+Q M GPSPAQH+TEVL Q  KL  CPM+MA+GGF +  T+GYF L TKKKPEASALDVAKV  G + PENT PR
Subjt:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR

A0A314Y3C0 Uncharacterized protein4.1e-2168.83Show/hide
Query:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR
        AG+Q M GPSPAQH+TEVL Q  KL  CPM+MA+GGF +  T+GYF L TKKKPEASALDVAKV  G + PENT PR
Subjt:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR

A0A5D3BA37 Putative transmembrane protein1.0e-2777.91Show/hide
Query:  MAGSQQMN-------GPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT
        M GSQQ+N       GPSPAQHTTEVL QRKKLPVCPM+MA+GGF IAATLGYFVL TKKKPEASALDVAKVT G++TP+NT PRT
Subjt:  MAGSQQMN-------GPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT

A0A5N6RUE0 Uncharacterized protein1.4e-2169.74Show/hide
Query:  GSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR
        G++ M GPSP QH+TEVL QR+KLP CPM+MA+GGF I A LGY VL +KKKPEASA DVAKV  GV+ PENT PR
Subjt:  GSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR

A0A6J1BZ44 uncharacterized protein LOC1110068102.3e-35100Show/hide
Query:  MAGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT
        MAGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT
Subjt:  MAGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31830.1 unknown protein1.2e-0944.16Show/hide
Query:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR
        AG +    P P  +   VL QR+ LP     MA+ G  I+  + Y V+  KKKPEA+A DVAK   G A PE+T PR
Subjt:  AGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGATCGCAGCAAATGAATGGTCCATCTCCGGCTCAGCACACCACCGAGGTTCTTTCCCAGCGCAAGAAACTGCCGGTTTGTCCGATGAAAATGGCGGTCGGCGG
CTTCGTGATCGCCGCCACACTCGGTTACTTCGTCCTCTGCACCAAGAAGAAGCCCGAGGCTTCCGCCCTTGACGTCGCTAAAGTCACCGCCGGCGTGGCTACTCCGGAGA
ACACCCGTCCCCGCACG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGATCGCAGCAAATGAATGGTCCATCTCCGGCTCAGCACACCACCGAGGTTCTTTCCCAGCGCAAGAAACTGCCGGTTTGTCCGATGAAAATGGCGGTCGGCGG
CTTCGTGATCGCCGCCACACTCGGTTACTTCGTCCTCTGCACCAAGAAGAAGCCCGAGGCTTCCGCCCTTGACGTCGCTAAAGTCACCGCCGGCGTGGCTACTCCGGAGA
ACACCCGTCCCCGCACG
Protein sequenceShow/hide protein sequence
MAGSQQMNGPSPAQHTTEVLSQRKKLPVCPMKMAVGGFVIAATLGYFVLCTKKKPEASALDVAKVTAGVATPENTRPRT