CuGenDBv2

Gene ID	MS002335
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Endo/exonuclease/phosphatase domain-containing protein
Genome location	scaffold30:4194513..4196067
RNA-Seq Expression	MS002335
Synteny	MS002335
Gene Ontology terms	GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process) GO:0000175 - 3'-5'-exoribonuclease activity (molecular function) GO:0004519 - endonuclease activity (molecular function)
InterPro domains	IPR036691 - Endonuclease/exonuclease/phosphatase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035681.1 hypothetical protein SDJN02_02479 [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-66

91.79

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGLPGY QFG+SRKGS D SDEHCTIFYDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWAISLIFRYDFSY
        SESPSVPGSMSWGSIVPHIATWAISL F Y  +Y
Subjt:  SESPSVPGSMSWGSIVPHIATWAISLIFRYDFSY

XP_004146677.1 uncharacterized protein LOC101208977 [Cucumis sativus]

2.8e-64

95.93

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGLPGYDQFGISRKGSHDDSDEHCTI+YDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGSMSWGSI PHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

XP_008443859.1 PREDICTED: uncharacterized protein LOC103487355 [Cucumis melo]

3.7e-64

95.93

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGLPGYDQFGISRKGSHDDSDEHCTIFY+KEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGSMSWGSI PHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

XP_022134563.1 uncharacterized protein LOC111006799 [Momordica charantia]

2.3e-66

100

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGSMSWGSIVPHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

XP_022921743.1 uncharacterized protein LOC111429898 isoform X2 [Cucurbita moschata]

8.3e-64

95.12

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISV+TSYSPAILCTQ+GVKSQLEFLQQGLPGY++FGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGS+SWGSI PHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWF4 Endo/exonuclease/phosphatase domain-containing protein

1.4e-64

95.93

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGLPGYDQFGISRKGSHDDSDEHCTI+YDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGSMSWGSI PHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

A0A1S3B900 uncharacterized protein LOC103487355

1.8e-64

95.93

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVM+FNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQ+GVKSQL+FLQQGLPGYDQFGISRKGSHDDSDEHCTIFY+KEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGSMSWGSI PHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

A0A6J1C2C1 uncharacterized protein LOC111006799

1.1e-66

100

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGSMSWGSIVPHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

A0A6J1JDF5 uncharacterized protein LOC111485786 isoform X1

4.0e-64

95.12

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISV+TSYSPAILCTQ+GVKSQLEFLQQGLPGY++FGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGS+SWGSI PHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

A0A6J1JMQ8 uncharacterized protein LOC111485786 isoform X2

4.0e-64

95.12

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISV+TSYSPAILCTQ+GVKSQLEFLQQGLPGY++FGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGS+SWGSI PHIATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30900.1 DNAse I-like superfamily protein

1.3e-54

78.05

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSV+L+VM+FNLHDD P ES NSW KR+DLC++VITSYSP +LCTQ+GVKSQL++LQQGLP YDQFGISR G  D +DEHCTIF++KEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGS +WGS VP IATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

AT4G30900.2 DNAse I-like superfamily protein

1.3e-54

78.05

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Query:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL
        MSV+L+VM+FNLHDD P ES NSW KR+DLC++VITSYSP +LCTQ+GVKSQL++LQQGLP YDQFGISR G  D +DEHCTIF++KEKVELLEGGTFWL
Subjt:  MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWL

Query:  SESPSVPGSMSWGSIVPHIATWA
        SESPSVPGS +WGS VP IATWA
Subjt:  SESPSVPGSMSWGSIVPHIATWA

Sequences

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CDS sequence

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ATGAGTGTTACTTTGACTGTAATGACCTTCAATCTCCATGACGATCAACCACCGGAGAGTTCAAATTCATGGGAGAAGAGGAGGGATTTGTGTATTAGTGTCATCACTAG
CTATTCTCCCGCGATTCTCTGTACTCAGCGTGGTGTGAAATCTCAATTGGAATTTCTTCAGCAGGGATTGCCTGGCTATGACCAATTTGGAATTTCAAGAAAAGGATCCC
ATGACGATTCAGATGAACATTGCACAATCTTTTATGACAAGGAGAAGGTAGAGCTGTTAGAAGGCGGCACATTTTGGTTATCAGAATCACCTTCCGTTCCAGGAAGTATG
TCTTGGGGTTCGATTGTTCCACATATTGCAACTTGGGCGATATCCTTGATATTTCGTTATGACTTCTCTTACATTGCATGC

mRNA sequence

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Protein sequence

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MSVTLTVMTFNLHDDQPPESSNSWEKRRDLCISVITSYSPAILCTQRGVKSQLEFLQQGLPGYDQFGISRKGSHDDSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSM
SWGSIVPHIATWAISLIFRYDFSYIAC

MS002335 (gene) of Bitter gourd (TR) v1 genome