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MS002373 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002373
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCyclophilin-like peptidyl-prolyl cis-trans isomerase family protein isoform 1
Genome locationscaffold30:4457940..4458239
RNA-Seq ExpressionMS002373
SyntenyMS002373
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050036.1 hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa]4.1e-1252.87Show/hide
Query:  KEMGGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSS
        ++MGG    V GSCVFDG  S+SM+DFLIERRPYHRNCGC LH    +NG +C H     +S+SF++ QK   T+   ++S+SK SS
Subjt:  KEMGGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSS

KAG6587851.1 hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1760Show/hide
Query:  GAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSP
        G E+M  G CVFDG  SISM DFLIERRPYHRNCGC LH  +KNG CPH     SS+SF++ +KWT T  L IQ+ S+FS+  +P
Subjt:  GAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSP

OMO52287.1 hypothetical protein CCACVL1_29281 [Corchorus capsularis]2.7e-1153.01Show/hide
Query:  GGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS
        G AE+M    CVF+G  SI M+D LIERRPYHRNCGC LH   G+C    F T +LSF +  KW + +     SASKFSS  S
Subjt:  GGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS

XP_023531631.1 uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo]2.7e-1658.82Show/hide
Query:  GAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSP
        G E+M  G CVFDG  SISM DFLIERRPYHRNCGC LH   KNG CPH     +S+SF++ +KWT T  L IQ+ S+FS+  +P
Subjt:  GAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSP

XP_023531633.1 uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo]2.7e-1658.82Show/hide
Query:  GAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSP
        G E+M  G CVFDG  SISM DFLIERRPYHRNCGC LH   KNG CPH     +S+SF++ +KWT T  L IQ+ S+FS+  +P
Subjt:  GAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSP

TrEMBL top hitse value%identityAlignment
A0A0A0LZ02 Uncharacterized protein1.6e-0947.83Show/hide
Query:  KEMGGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASK-FSSLPSP
        ++MGG      GS VFDG  S+S++ FLIERRPYHRNCGC LH   I+NG +C H     +S+SF++ QK  KT+   + S+S+ F +  SP
Subjt:  KEMGGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASK-FSSLPSP

A0A1R3G2J8 Uncharacterized protein1.3e-1153.01Show/hide
Query:  GGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS
        G AE+M    CVF+G  SI M+D LIERRPYHRNCGC LH   G+C    F T +LSF +  KW + +     SASKFSS  S
Subjt:  GGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS

A0A1R3G2K4 Uncharacterized protein4.6e-0951.81Show/hide
Query:  GGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS
        G AE++  G  +F+G  SI M+D LIERRPYHRNCGC LH   G C     +T +LSF + Q WT   SL + SAS FSS  S
Subjt:  GGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS

A0A2P5X4V6 Uncharacterized protein6.0e-0954.76Show/hide
Query:  AEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPF-KTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSPL
        AE+M+   CVF+G  SISM+D LIERRPYHRNC C LH   G C      +T+++SF + Q W   +SL + SASKFSS PSPL
Subjt:  AEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPF-KTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSPL

A0A5A7U781 Uncharacterized protein2.0e-1252.87Show/hide
Query:  KEMGGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSS
        ++MGG    V GSCVFDG  S+SM+DFLIERRPYHRNCGC LH    +NG +C H     +S+SF++ QK   T+   ++S+SK SS
Subjt:  KEMGGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46490.1 unknown protein4.0e-0535.48Show/hide
Query:  VFDGILSISMEDFLIERRPYHRNCGCKLHI------KNGSCPHPPF-----KTSSLSFMRNQKWTK------------TTSLHIQSASKFSSL
        +F+G   IS  D  IERRPYH+NCGC LH       KN +   PP       + S+SF   + W++            ++S ++QS S  SSL
Subjt:  VFDGILSISMEDFLIERRPYHRNCGCKLHI------KNGSCPHPPF-----KTSSLSFMRNQKWTK------------TTSLHIQSASKFSSL

AT5G35110.1 unknown protein1.0e-0536.67Show/hide
Query:  MVAGSC------VFDGILSISMEDFLIERRPYHRNCGCKLHIKN---GS---CPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS
        M AGS       +F+G   IS  D  I+RRPYH+NCGC LH ++   GS   C H   +       R+     + +LH+ S+S  S+L S
Subjt:  MVAGSC------VFDGILSISMEDFLIERRPYHRNCGCKLHIKN---GS---CPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAAAGAAATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGCGTGTTTGATGGGATATTGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCG
CAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTC
TTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCTCTTCGACACCCCGAACCAGATATTATTACTGACGAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGCGTGTTTGATGGGATATTGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCG
CAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTC
TTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCTCTTCGACACCCCGAACCAGATATTATTACTGACGAG
Protein sequenceShow/hide protein sequence
KKEMGGAEIMVAGSCVFDGILSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSPLRHPEPDIITDE