; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002381 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002381
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RNF12-B-like isoform X1
Genome locationscaffold30:4490897..4491049
RNA-Seq ExpressionMS002381
SyntenyMS002381
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135151.1 uncharacterized protein LOC111007190 isoform X1 [Momordica charantia]1.9e-1380.39Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHR+   +    +H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
XP_022921926.1 uncharacterized RING finger protein C4G3.12c-like isoform X1 [Cucurbita moschata]8.8e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
XP_022987678.1 uncharacterized RING finger protein C4G3.12c-like isoform X1 [Cucurbita maxima]8.8e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
XP_022987679.1 uncharacterized RING finger protein C4G3.12c-like isoform X2 [Cucurbita maxima]8.8e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
XP_023515421.1 uncharacterized protein LOC111779586 isoform X1 [Cucurbita pepo subsp. pepo]8.8e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
TrEMBL top hitse value%identityAlignment
A0A6J1BZU1 uncharacterized protein LOC111007190 isoform X19.2e-1480.39Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHR+   +    +H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
A0A6J1E1R4 uncharacterized RING finger protein C4G3.12c-like isoform X24.3e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
A0A6J1E2Q3 uncharacterized RING finger protein C4G3.12c-like isoform X14.3e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
A0A6J1JJJ1 uncharacterized RING finger protein C4G3.12c-like isoform X24.3e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
A0A6J1JK55 uncharacterized RING finger protein C4G3.12c-like isoform X14.3e-1170.59Show/hide
Query:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
        MG SCSRLGSRPSRSRD RTNRS FCSLFCGAS+SRAIH++   +   ++H
Subjt:  MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGAGCTGTAGTCGTCTGGGGTCGCGCCCTTCTCGCTCCCGAGATAACCGCACCAACCGCTCCAACTTCTGTTCTCTCTTCTGCGGTGCTTCCACTTCTCGCGC
GATTCATCGGGTATTTTCCCCTTCCCGTAATCTTATTCTTCAT
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGAGCTGTAGTCGTCTGGGGTCGCGCCCTTCTCGCTCCCGAGATAACCGCACCAACCGCTCCAACTTCTGTTCTCTCTTCTGCGGTGCTTCCACTTCTCGCGC
GATTCATCGGGTATTTTCCCCTTCCCGTAATCTTATTCTTCAT
Protein sequenceShow/hide protein sequence
MGLSCSRLGSRPSRSRDNRTNRSNFCSLFCGASTSRAIHRVFSPSRNLILH