CuGenDBv2

Gene ID	MS002393
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	scaffold30:4561525..4561740
RNA-Seq Expression	MS002393
Synteny	MS002393
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88883.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria]

2.1e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

2.1e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

YP_009325992.1 NADH dehydrogenase subunit J [Citrullus lanatus]

2.1e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

YP_009526305.1 NADH dehydrogenase subunit J [Hemsleya lijiangensis]

2.1e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

YP_009752330.1 NADH dehydrogenase subunit J [Bryonia marmorata]

2.1e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

TrEMBL top hits

e value

%identity

Alignment

A0A109WWM6 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.0e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

A0A1P8LDY6 NADH-quinone oxidoreductase subunit C

1.0e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

A0A2Z2CGF1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.0e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

A0A6H0EQB7 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.0e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

X2F723 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.0e-34

98.61

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

SwissProt top hits

e value

%identity

Alignment

B0Z4L4 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

5.2e-36

95.83

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QG LS+WLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

B0Z4U8 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

5.2e-36

95.83

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QG LS+WLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.0e-36

95.83

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QGHLS WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.8e-36

97.22

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

Q9MTP3 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

5.2e-36

95.83

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QG LS+WLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

7.7e-35

91.67

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Query:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR
        QG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAP GLLASVYHLTR
Subjt:  QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

Sequences

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CDS sequence

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CAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCTGAGGAGTGGCATTC
CATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGACGGACTGTTAGCTAGTGTGTATCATCTTACGAGA

mRNA sequence

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Protein sequence

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QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR

MS002393 (gene) of Bitter gourd (TR) v1 genome