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MS002394 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002394
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:4562366..4562671
RNA-Seq ExpressionMS002394
SyntenyMS002394
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]3.3e-2559.22Show/hide
Query:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL
        +++KL L+  VC+AI+A +  A   AAAP+DP+ +EK SL  C SF+SE TKCV+DV+K AVAPHPSCCKA ++LNDCS  FLK +P+ +M LIK +CAL
Subjt:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL

Query:  WGV
        WGV
Subjt:  WGV

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]8.7e-2661.17Show/hide
Query:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL
        ++MKL L+ LVCIAI+A +  A   A AP DP+ +E+FSL  C SF+SE T C+VDV+K AVAPHPSCCKA ++LNDCSS FLK +P+ +M LIK +CAL
Subjt:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL

Query:  WGV
        WGV
Subjt:  WGV

KAG6589812.1 hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sororia]5.1e-2669.7Show/hide
Query:  MKLALLLLVCIAIVAPAAPAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCALWGV
        MKLA   LVCIAI+  A+PA A    DP+ +E FSLF C S VSE+TKCVVDV+KQAVAPHPSCC+AI++LN CSS FLKDVP+ +M LIKTVCALWGV
Subjt:  MKLALLLLVCIAIVAPAAPAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCALWGV

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]9.6e-2558.25Show/hide
Query:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL
        +++KL L+  VC+AI+A +  A   AAAP+DP+ +E+ SL  C SF+SE TKCV+DV+K AVAPHPSCCKA ++LNDCS  FLK +P+ +M LIK +CAL
Subjt:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL

Query:  WGV
        WGV
Subjt:  WGV

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]1.4e-2359.81Show/hide
Query:  SSAMKLALLLLVCIAIVAPAAPA-----AAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKT
        S+  KL L+LLVCIAI+A +  A     AAA PT    SE FSLF C SFV + TKCV+DV+K AVAPHPSCC+AI++L+DCSS FLKD+P+ +M L+K+
Subjt:  SSAMKLALLLLVCIAIVAPAAPA-----AAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKT

Query:  VCALWGV
        +CA WGV
Subjt:  VCALWGV

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein6.3e-2258.1Show/hide
Query:  SSAMKLALLLLVCIAIVA---PAAPAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVC
        S+  KL L+LLVCIAI+A    A P   AA T   +S+ FSLF C SFV   TK V+DV+K AVAPHPSCC+AI++L+DCSS FLKD+P+++M L+K++C
Subjt:  SSAMKLALLLLVCIAIVA---PAAPAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVC

Query:  ALWGV
        A WGV
Subjt:  ALWGV

A0A5A7U483 Uncharacterized protein1.6e-2559.22Show/hide
Query:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL
        +++KL L+  VC+AI+A +  A   AAAP+DP+ +EK SL  C SF+SE TKCV+DV+K AVAPHPSCCKA ++LNDCS  FLK +P+ +M LIK +CAL
Subjt:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL

Query:  WGV
        WGV
Subjt:  WGV

A0A5A7U9B0 Uncharacterized protein2.2e-2257.94Show/hide
Query:  SSAMKLALLLLVCIAIVAPAAPA-----AAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKT
        S+  KL L+L VCIAI+A +  A     AAA PT    SE FSLF C SFV + TKCV+DV+K  VAPHPSCC+AI +L+DCSS FLKD+P+ +M L+K+
Subjt:  SSAMKLALLLLVCIAIVAPAAPA-----AAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKT

Query:  VCALWGV
        +CA WGV
Subjt:  VCALWGV

A0A5D3CFS6 Uncharacterized protein6.7e-2459.81Show/hide
Query:  SSAMKLALLLLVCIAIVAPAAPA-----AAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKT
        S+  KL L+LLVCIAI+A +  A     AAA PT    SE FSLF C SFV + TKCV+DV+K AVAPHPSCC+AI++L+DCSS FLKD+P+ +M L+K+
Subjt:  SSAMKLALLLLVCIAIVAPAAPA-----AAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKT

Query:  VCALWGV
        +CA WGV
Subjt:  VCALWGV

A0A5D3CG41 Uncharacterized protein4.6e-2558.25Show/hide
Query:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL
        +++KL L+  VC+AI+A +  A   AAAP+DP+ +E+ SL  C SF+SE TKCV+DV+K AVAPHPSCCKA ++LNDCS  FLK +P+ +M LIK +CAL
Subjt:  SAMKLALLLLVCIAIVAPA--APAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCAL

Query:  WGV
        WGV
Subjt:  WGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATCAGCCATGAAGTTGGCTCTTCTACTCCTAGTCTGCATAGCCATTGTAGCACCGGCAGCACCGGCAGCAGCAGCAGCGCCCACCGATCCATACCTGTCGGAGAAGTT
CTCATTGTTCCGGTGTGCGTCGTTTGTTTCGGAGGTGACGAAATGTGTGGTGGATGTGGTGAAGCAGGCGGTGGCTCCTCACCCTTCTTGCTGCAAAGCCATTGCAAGGC
TCAACGACTGCTCCTCCTCCTTTCTCAAAGACGTTCCCGCCGAGGAAATGGGTTTGATTAAGACCGTTTGCGCTTTATGGGGCGTT
mRNA sequenceShow/hide mRNA sequence
TCATCAGCCATGAAGTTGGCTCTTCTACTCCTAGTCTGCATAGCCATTGTAGCACCGGCAGCACCGGCAGCAGCAGCAGCGCCCACCGATCCATACCTGTCGGAGAAGTT
CTCATTGTTCCGGTGTGCGTCGTTTGTTTCGGAGGTGACGAAATGTGTGGTGGATGTGGTGAAGCAGGCGGTGGCTCCTCACCCTTCTTGCTGCAAAGCCATTGCAAGGC
TCAACGACTGCTCCTCCTCCTTTCTCAAAGACGTTCCCGCCGAGGAAATGGGTTTGATTAAGACCGTTTGCGCTTTATGGGGCGTT
Protein sequenceShow/hide protein sequence
SSAMKLALLLLVCIAIVAPAAPAAAAAPTDPYLSEKFSLFRCASFVSEVTKCVVDVVKQAVAPHPSCCKAIARLNDCSSSFLKDVPAEEMGLIKTVCALWGV