; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002395 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002395
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold30:4564046..4564378
RNA-Seq ExpressionMS002395
SyntenyMS002395
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]5.9e-2056.6Show/hide
Query:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND
        KLPL+   C+AILA    AH  AAA       SD F  E  S + C SF+SE+TKCVIDV+ N  APH SCC A SKLNDCS   LKGI SA+M LIK  
Subjt:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND

Query:  CASWGI
        CA WG+
Subjt:  CASWGI

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]4.7e-1751.35Show/hide
Query:  SVTKLPLLLLACIAILAPLATA--HAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMS
        ++TKLPL+L  CIAILA   TA     AAA P          +E FS   C+SF+ ++TKCVIDV+ N  APH SCC AI++L+DCSS  LK I S +M 
Subjt:  SVTKLPLLLLACIAILAPLATA--HAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMS

Query:  LIKNDCASWGI
        L+K+ CASWG+
Subjt:  LIKNDCASWGI

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]4.5e-2055.66Show/hide
Query:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND
        KLPL+ L CIAILA    AH  A A       +D F  E FS + C SF+SE+T C++DV+ N  APH SCC A SKLNDCSS  LKGI SA+M LIK  
Subjt:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND

Query:  CASWGI
        CA WG+
Subjt:  CASWGI

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]5.9e-2056.6Show/hide
Query:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND
        KLPL+   C+AILA    AH  AAA       SD F  E  S + C SF+SE+TKCVIDV+ N  APH SCC A SKLNDCS   LKGI SA+M LIK  
Subjt:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND

Query:  CASWGI
        CA WG+
Subjt:  CASWGI

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]1.1e-1852.29Show/hide
Query:  SVTKLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLI
        ++TKLPL+LL CIAILA   TA     AA           +E FS   C+SF+ ++TKCVIDV+ N  APH SCC AIS+L+DCSS  LK I S++M L+
Subjt:  SVTKLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLI

Query:  KNDCASWGI
        K+ CASWG+
Subjt:  KNDCASWGI

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein6.6e-1750.46Show/hide
Query:  SVTKLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLI
        ++TKLPL+LL CIAILA   TA     AA          +++ FS   C+SF+  +TK VIDV+ N  APH SCC AIS+L+DCSS  LK I S +M L+
Subjt:  SVTKLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLI

Query:  KNDCASWGI
        K+ CASWG+
Subjt:  KNDCASWGI

A0A5A7U483 Uncharacterized protein2.9e-2056.6Show/hide
Query:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND
        KLPL+   C+AILA    AH  AAA       SD F  E  S + C SF+SE+TKCVIDV+ N  APH SCC A SKLNDCS   LKGI SA+M LIK  
Subjt:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND

Query:  CASWGI
        CA WG+
Subjt:  CASWGI

A0A5A7U9B0 Uncharacterized protein2.3e-1751.35Show/hide
Query:  SVTKLPLLLLACIAILAPLATA--HAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMS
        ++TKLPL+L  CIAILA   TA     AAA P          +E FS   C+SF+ ++TKCVIDV+ N  APH SCC AI++L+DCSS  LK I S +M 
Subjt:  SVTKLPLLLLACIAILAPLATA--HAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMS

Query:  LIKNDCASWGI
        L+K+ CASWG+
Subjt:  LIKNDCASWGI

A0A5D3CFS6 Uncharacterized protein5.4e-1952.29Show/hide
Query:  SVTKLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLI
        ++TKLPL+LL CIAILA   TA     AA           +E FS   C+SF+ ++TKCVIDV+ N  APH SCC AIS+L+DCSS  LK I S++M L+
Subjt:  SVTKLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLI

Query:  KNDCASWGI
        K+ CASWG+
Subjt:  KNDCASWGI

A0A5D3CG41 Uncharacterized protein2.9e-2056.6Show/hide
Query:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND
        KLPL+   C+AILA    AH  AAA       SD F  E  S + C SF+SE+TKCVIDV+ N  APH SCC A SKLNDCS   LKGI SA+M LIK  
Subjt:  KLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKND

Query:  CASWGI
        CA WG+
Subjt:  CASWGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCGGATCGGTGACGAAGTTACCTCTTCTGTTACTTGCCTGTATAGCAATTTTAGCACCATTGGCGACGGCTCACGCGGCGGCTGCGGCGGCGCCTAGGGCTGGGGAGGA
GTCCGATGCGTTCCTAACAGAGACGTTCTCTTTCATCCGCTGCGTATCGTTCCTCTCCGAGTCGACGAAATGTGTGATAGATGTGATTGTGAATGGTGGTGCTCCTCACC
GTTCTTGCTGCAACGCCATTTCTAAGCTCAACGACTGCTCCTCATTTCTTCTCAAAGGCATTTCCTCCGCAGAAATGAGTTTGATTAAGAACGATTGCGCTTCCTGGGGT
ATT
mRNA sequenceShow/hide mRNA sequence
ATCGGATCGGTGACGAAGTTACCTCTTCTGTTACTTGCCTGTATAGCAATTTTAGCACCATTGGCGACGGCTCACGCGGCGGCTGCGGCGGCGCCTAGGGCTGGGGAGGA
GTCCGATGCGTTCCTAACAGAGACGTTCTCTTTCATCCGCTGCGTATCGTTCCTCTCCGAGTCGACGAAATGTGTGATAGATGTGATTGTGAATGGTGGTGCTCCTCACC
GTTCTTGCTGCAACGCCATTTCTAAGCTCAACGACTGCTCCTCATTTCTTCTCAAAGGCATTTCCTCCGCAGAAATGAGTTTGATTAAGAACGATTGCGCTTCCTGGGGT
ATT
Protein sequenceShow/hide protein sequence
IGSVTKLPLLLLACIAILAPLATAHAAAAAAPRAGEESDAFLTETFSFIRCVSFLSESTKCVIDVIVNGGAPHRSCCNAISKLNDCSSFLLKGISSAEMSLIKNDCASWG
I