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MS002410 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002410
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionvesicle-associated membrane protein 711-like
Genome locationscaffold30:4702296..4702418
RNA-Seq ExpressionMS002410
SyntenyMS002410
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021765.1 Vesicle-associated membrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-0486.21Show/hide
Query:  CSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        CSL  IFT+VLYIVLAFFCEGPLLPSC N
Subjt:  CSLFFIFTMVLYIVLAFFCEGPLLPSCLN

TYK06370.1 vesicle-associated membrane protein 711-like protein [Cucumis melo var. makuwa]3.8e-0465.85Show/hide
Query:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        R T+    F   CSL  IFT+VLYI+LAFFC+GPLLPSCLN
Subjt:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN

XP_016899833.1 PREDICTED: vesicle-associated membrane protein 711-like [Cucumis melo]3.8e-0465.85Show/hide
Query:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        R T+    F   CSL  IFT+VLYI+LAFFC+GPLLPSCLN
Subjt:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN

XP_022134688.1 vesicle-associated membrane protein 711-like [Momordica charantia]6.2e-0778.05Show/hide
Query:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        R T+    F   CSLFFIFTMVLYIVLAFFCEGPLLPSCLN
Subjt:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN

XP_022925063.1 vesicle-associated membrane protein 711-like [Cucurbita moschata]3.8e-0486.21Show/hide
Query:  CSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        CSL  IFT+VLYIVLAFFCEGPLLPSC N
Subjt:  CSLFFIFTMVLYIVLAFFCEGPLLPSCLN

TrEMBL top hitse value%identityAlignment
A0A0A0LWB2 Uncharacterized protein5.3e-0463.41Show/hide
Query:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        R T+    F   CSL  IF +VLYI+LAFFC+GPLLPSCLN
Subjt:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN

A0A1S4DV36 vesicle-associated membrane protein 711-like1.8e-0465.85Show/hide
Query:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        R T+    F   CSL  IFT+VLYI+LAFFC+GPLLPSCLN
Subjt:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN

A0A5D3C4W2 Vesicle-associated membrane protein 711-like protein1.8e-0465.85Show/hide
Query:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        R T+    F   CSL  IFT+VLYI+LAFFC+GPLLPSCLN
Subjt:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN

A0A6J1C2Q2 vesicle-associated membrane protein 711-like3.0e-0778.05Show/hide
Query:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        R T+    F   CSLFFIFTMVLYIVLAFFCEGPLLPSCLN
Subjt:  RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN

A0A6J1EE68 vesicle-associated membrane protein 711-like1.8e-0486.21Show/hide
Query:  CSLFFIFTMVLYIVLAFFCEGPLLPSCLN
        CSL  IFT+VLYIVLAFFCEGPLLPSC N
Subjt:  CSLFFIFTMVLYIVLAFFCEGPLLPSCLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAGAACAATAATCGACGTGCGTTTTTCCTGCAGATGTTCGTTGTTTTTCATTTTTACGATGGTCCTCTATATTGTGCTAGCATTTTTCTGCGAAGGACCCCTCTTGCC
GTCCTGCTTGAAT
mRNA sequenceShow/hide mRNA sequence
AGGAGAACAATAATCGACGTGCGTTTTTCCTGCAGATGTTCGTTGTTTTTCATTTTTACGATGGTCCTCTATATTGTGCTAGCATTTTTCTGCGAAGGACCCCTCTTGCC
GTCCTGCTTGAAT
Protein sequenceShow/hide protein sequence
RRTIIDVRFSCRCSLFFIFTMVLYIVLAFFCEGPLLPSCLN