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MS002428 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002428
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold318:7737..8078
RNA-Seq ExpressionMS002428
SyntenyMS002428
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575830.1 hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]6.1e-1237.61Show/hide
Query:  WTMKKILGLREIEGKLLLRE--EELQIQYNIFRWWPTNKVLQVLTDFENGVNITLFDQKRREKIETNMKWVPADYGFHIQWDIEGKWYEGGDEIKMYWDY
        WTM K L   ++ G L LRE  E+  I+ N+F WWP +KV  +     + V I L+D    + I+T M+W+     +HI+WDI+ K Y  GD++ M+WD 
Subjt:  WTMKKILGLREIEGKLLLRE--EELQIQYNIFRWWPTNKVLQVLTDFENGVNITLFDQKRREKIETNMKWVPADYGFHIQWDIEGKWYEGGDEIKMYWDY

Query:  LNDQLCYLV
          ++L Y +
Subjt:  LNDQLCYLV

KAG6575832.1 hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1236.36Show/hide
Query:  KWTMKKILGLREIEGKLLLREEEL--QIQYNIFRWWPTNKVLQVLTDFENGVNITLFDQKRREKIETNMKWVPADYGFHIQWDIEGKWYEGGDEIKMYWD
        +WTM K L   ++ G L LRE+++   I  N+FRWW  +KV  +     N   ITLFD+   E + T ++W+     +HI+WD++ K Y  G ++ M WD
Subjt:  KWTMKKILGLREIEGKLLLREEEL--QIQYNIFRWWPTNKVLQVLTDFENGVNITLFDQKRREKIETNMKWVPADYGFHIQWDIEGKWYEGGDEIKMYWD

Query:  YLNDQLCYLV
           ++L Y V
Subjt:  YLNDQLCYLV

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGAAGTAAAAATGGTGAAATGGACAATGAAAAAGATTTTGGGATTAAGAGAGATTGAAGGAAAATTGTTGTTGAGAGAAGAAGAATTACAAATCCAATACAATATATT
CAGATGGTGGCCCACAAATAAAGTTTTGCAAGTGTTGACAGACTTTGAAAATGGAGTAAACATCACTTTGTTTGACCAAAAGAGGAGAGAAAAAATTGAGACAAATATGA
AATGGGTGCCTGCTGATTACGGGTTCCATATTCAATGGGACATTGAAGGAAAATGGTATGAAGGTGGAGATGAGATTAAGATGTATTGGGATTATCTCAACGATCAATTG
TGTTACCTTGTA
mRNA sequenceShow/hide mRNA sequence
GAAGAAGTAAAAATGGTGAAATGGACAATGAAAAAGATTTTGGGATTAAGAGAGATTGAAGGAAAATTGTTGTTGAGAGAAGAAGAATTACAAATCCAATACAATATATT
CAGATGGTGGCCCACAAATAAAGTTTTGCAAGTGTTGACAGACTTTGAAAATGGAGTAAACATCACTTTGTTTGACCAAAAGAGGAGAGAAAAAATTGAGACAAATATGA
AATGGGTGCCTGCTGATTACGGGTTCCATATTCAATGGGACATTGAAGGAAAATGGTATGAAGGTGGAGATGAGATTAAGATGTATTGGGATTATCTCAACGATCAATTG
TGTTACCTTGTA
Protein sequenceShow/hide protein sequence
EEVKMVKWTMKKILGLREIEGKLLLREEELQIQYNIFRWWPTNKVLQVLTDFENGVNITLFDQKRREKIETNMKWVPADYGFHIQWDIEGKWYEGGDEIKMYWDYLNDQL
CYLV