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MS002429 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002429
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmembrane protein of ER body 2-like isoform X1
Genome locationscaffold318:10064..10537
RNA-Seq ExpressionMS002429
SyntenyMS002429
Gene Ontology termsGO:0030026 - cellular manganese ion homeostasis (biological process)
GO:0071421 - manganese ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005384 - manganese ion transmembrane transporter activity (molecular function)
InterPro domainsIPR008217 - Ccc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144855.1 membrane protein of ER body 2-like isoform X1 [Momordica charantia]1.7e-8498.73Show/hide
Query:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY
        ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFV FGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY
Subjt:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY

Query:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF
        INTIGKCIVDA GTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF
Subjt:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF

XP_038897300.1 membrane protein of ER body-like protein isoform X1 [Benincasa hispida]3.4e-5365.81Show/hide
Query:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG
        IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FTF  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV 
Subjt:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG

Query:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT
        ++N IG C+VDA+GT++LTTIGG++I NYID+ GWF+PNKIPTLF P  SF N T
Subjt:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT

XP_038897301.1 membrane protein of ER body-like protein isoform X2 [Benincasa hispida]3.4e-5365.81Show/hide
Query:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG
        IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FTF  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV 
Subjt:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG

Query:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT
        ++N IG C+VDA+GT++LTTIGG++I NYID+ GWF+PNKIPTLF P  SF N T
Subjt:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT

XP_038897302.1 membrane protein of ER body 1-like isoform X3 [Benincasa hispida]3.4e-5365.81Show/hide
Query:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG
        IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FTF  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV 
Subjt:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG

Query:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT
        ++N IG C+VDA+GT++LTTIGG++I NYID+ GWF+PNKIPTLF P  SF N T
Subjt:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT

XP_038897303.1 uncharacterized protein LOC120085412 isoform X4 [Benincasa hispida]3.4e-5365.81Show/hide
Query:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG
        IS+LW+   ++G+ E+ D EN E+YE +FGDRKNYRLHF  A+LSFV FGL+PPLVY FTF  PEDK LK+PTVTI  VLCIALLG  KAYI R+ NCV 
Subjt:  ISDLWMNKQQTGSHESND-ENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG

Query:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT
        ++N IG C+VDA+GT++LTTIGG++I NYID+ GWF+PNKIPTLF P  SF N T
Subjt:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRT

TrEMBL top hitse value%identityAlignment
A0A0A0K8E6 Uncharacterized protein2.9e-2642.14Show/hide
Query:  ISDLWMNKQQTGSHESNDEND-EQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG
        +S L  N+ +  S++S+D    + YEE  GDR +Y LHFTTA+LSF+ FGL+PPLVYGF+FR+ +D +LK+  V  +++LCIALL   KAY+ + NN   
Subjt:  ISDLWMNKQQTGSHESNDEND-EQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG

Query:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNK-IPTLFLPSMSFHNRTRGA
        Y  T+   +    G + L+ + G  +   ++QLGWF+ ++ +PTL LP+M     T G+
Subjt:  YINTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNK-IPTLFLPSMSFHNRTRGA

A0A6J1CSU1 membrane protein of ER body 2-like isoform X18.1e-8598.73Show/hide
Query:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY
        ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFV FGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY
Subjt:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY

Query:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF
        INTIGKCIVDA GTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF
Subjt:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF

A0A6J1JNK9 membrane protein of ER body 1-like isoform X12.2e-2643.67Show/hide
Query:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY
        IS L  NK +   +E  +   + YEE  GDR++Y LHFT AMLSF+ FGL+PPLVYGF+FRN +D +LK+  V  +++LCIALL   KAY  R  N   Y
Subjt:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY

Query:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKI-PTLFLPSMSFHNRTRGA
          T+   I    G + L+ + G      ++Q GWF+ + + PTL LP+M F   T G+
Subjt:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKI-PTLFLPSMSFHNRTRGA

A0A6J1JX70 membrane protein of ER body 1-like6.3e-4561.81Show/hide
Query:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY
        IS  W + Q++G  E  +E  ++YE++FGDRKNYRLH T A+LSF+ FGLVPPL+YGFTFR PEDK LKIPTVTI +VLCI LLG  KAYI +  NC+ Y
Subjt:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY

Query:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGW--FEPNKIPT
        ++ IG CI DAIGT+ +TT+GG++I NY+D+ GW  FEPNK+PT
Subjt:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGW--FEPNKIPT

A0A6J1JXX6 membrane protein of ER body-like protein isoform X22.2e-2643.67Show/hide
Query:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY
        IS L  NK +   +E  +   + YEE  GDR++Y LHFT AMLSF+ FGL+PPLVYGF+FRN +D +LK+  V  +++LCIALL   KAY  R  N   Y
Subjt:  ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGY

Query:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKI-PTLFLPSMSFHNRTRGA
          T+   I    G + L+ + G      ++Q GWF+ + + PTL LP+M F   T G+
Subjt:  INTIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFEPNKI-PTLFLPSMSFHNRTRGA

SwissProt top hitse value%identityAlignment
F4KFS7 Membrane protein of ER body 24.8e-1836.36Show/hide
Query:  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDA
        S+D+  ++YEEL G R   R+H   A++S++FFGL+PPLVY F+F     KN K+ +V + +++C+ LLG+IK Y+ +  N  G    Y+ +        
Subjt:  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDA

Query:  IGTAILTTIGGDIIGNYIDQL
        + +  ++ + GDI+G YI++L
Subjt:  IGTAILTTIGGDIIGNYIDQL

Q8LPT3 Membrane protein of ER body-like protein4.7e-1330.82Show/hide
Query:  DENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTI---GKCIVDAIGT
        +E + +Y+ L G R+N+ LH T A+LSF+  G++PP+VY F+F    +K+ K+ +V  A++ CI LL   KA++        Y+ +I   G   V   G 
Subjt:  DENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTI---GKCIVDAIGT

Query:  AILTTIGGDIIGNYIDQL----GWFEPNKIPTLFLPSMSFHNRTRG
        +        ++GN+++QL    GW + ++ P   +   S   R  G
Subjt:  AILTTIGGDIIGNYIDQL----GWFEPNKIPTLFLPSMSFHNRTRG

Q8W4P8 Membrane protein of ER body 14.2e-1432.09Show/hide
Query:  KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYIN
        ++QT + +S +E    +++YEE+ G R+  R+H   A+ SFV FGL+PPLVYGF+FR   +K    K+  V   ++LCI LL   KAY+ ++ +   Y+ 
Subjt:  KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYIN

Query:  TIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFE
        T+ +    A   +  +   G ++  ++++ G+++
Subjt:  TIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFE

Arabidopsis top hitse value%identityAlignment
AT4G27860.1 vacuolar iron transporter (VIT) family protein3.0e-1532.09Show/hide
Query:  KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYIN
        ++QT + +S +E    +++YEE+ G R+  R+H   A+ SFV FGL+PPLVYGF+FR   +K    K+  V   ++LCI LL   KAY+ ++ +   Y+ 
Subjt:  KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYIN

Query:  TIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFE
        T+ +    A   +  +   G ++  ++++ G+++
Subjt:  TIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFE

AT4G27860.2 vacuolar iron transporter (VIT) family protein3.0e-1532.09Show/hide
Query:  KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYIN
        ++QT + +S +E    +++YEE+ G R+  R+H   A+ SFV FGL+PPLVYGF+FR   +K    K+  V   ++LCI LL   KAY+ ++ +   Y+ 
Subjt:  KQQTGSHESNDE---NDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDK--NLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYIN

Query:  TIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFE
        T+ +    A   +  +   G ++  ++++ G+++
Subjt:  TIGKCIVDAIGTAILTTIGGDIIGNYIDQLGWFE

AT4G27870.1 Vacuolar iron transporter (VIT) family protein3.3e-1430.82Show/hide
Query:  DENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTI---GKCIVDAIGT
        +E + +Y+ L G R+N+ LH T A+LSF+  G++PP+VY F+F    +K+ K+ +V  A++ CI LL   KA++        Y+ +I   G   V   G 
Subjt:  DENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTI---GKCIVDAIGT

Query:  AILTTIGGDIIGNYIDQL----GWFEPNKIPTLFLPSMSFHNRTRG
        +        ++GN+++QL    GW + ++ P   +   S   R  G
Subjt:  AILTTIGGDIIGNYIDQL----GWFEPNKIPTLFLPSMSFHNRTRG

AT5G24290.1 Vacuolar iron transporter (VIT) family protein3.4e-1936.36Show/hide
Query:  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDA
        S+D+  ++YEEL G R   R+H   A++S++FFGL+PPLVY F+F     KN K+ +V + +++C+ LLG+IK Y+ +  N  G    Y+ +        
Subjt:  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDA

Query:  IGTAILTTIGGDIIGNYIDQL
        + +  ++ + GDI+G YI++L
Subjt:  IGTAILTTIGGDIIGNYIDQL

AT5G24290.2 Vacuolar iron transporter (VIT) family protein3.4e-1936.36Show/hide
Query:  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDA
        S+D+  ++YEEL G R   R+H   A++S++FFGL+PPLVY F+F     KN K+ +V + +++C+ LLG+IK Y+ +  N  G    Y+ +        
Subjt:  SNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVG----YINTIGKCIVDA

Query:  IGTAILTTIGGDIIGNYIDQL
        + +  ++ + GDI+G YI++L
Subjt:  IGTAILTTIGGDIIGNYIDQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATCAGATCTTTGGATGAACAAGCAACAAACTGGATCGCATGAATCAAATGACGAAAACGATGAACAGTATGAAGAATTATTTGGAGATCGAAAAAATTATCGTCTCCA
TTTCACAACGGCTATGTTATCATTCGTATTTTTTGGCTTGGTACCTCCTCTTGTTTATGGCTTCACGTTTCGCAACCCTGAGGACAAAAATCTCAAGATCCCAACAGTTA
CAATAGCTGCTGTTTTATGCATTGCATTACTTGGTGCGATTAAAGCTTACATTGGGAGACAAAACAACTGTGTTGGATATATCAATACCATTGGCAAATGTATTGTTGAT
GCAATAGGCACAGCAATTCTTACAACTATTGGAGGTGACATAATTGGAAATTACATTGACCAACTTGGTTGGTTTGAACCAAATAAAATACCAACCTTGTTCCTCCCCAG
CATGAGTTTTCACAATCGTACCCGTGGAGCCTTT
mRNA sequenceShow/hide mRNA sequence
ATATCAGATCTTTGGATGAACAAGCAACAAACTGGATCGCATGAATCAAATGACGAAAACGATGAACAGTATGAAGAATTATTTGGAGATCGAAAAAATTATCGTCTCCA
TTTCACAACGGCTATGTTATCATTCGTATTTTTTGGCTTGGTACCTCCTCTTGTTTATGGCTTCACGTTTCGCAACCCTGAGGACAAAAATCTCAAGATCCCAACAGTTA
CAATAGCTGCTGTTTTATGCATTGCATTACTTGGTGCGATTAAAGCTTACATTGGGAGACAAAACAACTGTGTTGGATATATCAATACCATTGGCAAATGTATTGTTGAT
GCAATAGGCACAGCAATTCTTACAACTATTGGAGGTGACATAATTGGAAATTACATTGACCAACTTGGTTGGTTTGAACCAAATAAAATACCAACCTTGTTCCTCCCCAG
CATGAGTTTTCACAATCGTACCCGTGGAGCCTTT
Protein sequenceShow/hide protein sequence
ISDLWMNKQQTGSHESNDENDEQYEELFGDRKNYRLHFTTAMLSFVFFGLVPPLVYGFTFRNPEDKNLKIPTVTIAAVLCIALLGAIKAYIGRQNNCVGYINTIGKCIVD
AIGTAILTTIGGDIIGNYIDQLGWFEPNKIPTLFLPSMSFHNRTRGAF