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MS002434 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002434
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold318:49051..49185
RNA-Seq ExpressionMS002434
SyntenyMS002434
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.5e-0662.22Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        NST IALIPK+K  R +SD+R I+LCNV+YKI++K +TNRLK ++
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

XP_023923653.1 uncharacterized protein LOC112035046 [Quercus suber]2.6e-0664.44Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        N TNI LIPK+K   K+SD+R I+LCNV YKI++K L NRLKQ+L
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

XP_023925698.1 uncharacterized protein LOC112037116 [Quercus suber]2.6e-0666.67Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        N T I LIPK+K+  KVSDYRSI+LCNV YKI+ + L NRLKQ+L
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

XP_030970335.1 uncharacterized protein LOC115990665 [Quercus lobata]6.8e-0764.44Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        NST IALIPK+KH +KV+D+R I+LCNV YK+++K L NRLK+ L
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

XP_042956301.1 uncharacterized protein LOC122292146 [Carya illinoinensis]2.6e-0664.44Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        N T I LIPK+K  +KVSDYR INLCNV YK++ K L NRLK +L
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

TrEMBL top hitse value%identityAlignment
A0A2N9HFT1 Uncharacterized protein1.6e-0662.22Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        N TNI LIPK+K+R KVS+YR I+LCNV YKI++K + N LK +L
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

A0A5B7A5I4 Reverse transcriptase domain-containing protein1.6e-0662.22Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        N T I LIPK+K+ RKVSD+R I+LCNV YK+++K L NRLK +L
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

A0A6J0L2M9 uncharacterized protein LOC1088253212.1e-0660Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        N+TNI LIPK    RK+S+YR I+LCNVAYK+++K +T RLKQ++
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

A0A6J1DX30 uncharacterized protein LOC1110248747.3e-0762.22Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        NST IALIPK+K  R +SD+R I+LCNV+YKI++K +TNRLK ++
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

A0A6P9EGD1 uncharacterized protein LOC1090004332.8e-0664.44Show/hide
Query:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL
        N T I LIPK+K+ ++VSDYR I+LCNV YKIV+K L NRLK +L
Subjt:  NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATTCTACTAATATTGCTCTTATTCCCAAGTTGAAACATCGAAGGAAAGTATCAGATTATAGATCGATCAATCTTTGTAATGTGGCCTACAAGATTGTTACCAAGTTCTT
GACAAATAGATTGAAACAACTGTTA
mRNA sequenceShow/hide mRNA sequence
AATTCTACTAATATTGCTCTTATTCCCAAGTTGAAACATCGAAGGAAAGTATCAGATTATAGATCGATCAATCTTTGTAATGTGGCCTACAAGATTGTTACCAAGTTCTT
GACAAATAGATTGAAACAACTGTTA
Protein sequenceShow/hide protein sequence
NSTNIALIPKLKHRRKVSDYRSINLCNVAYKIVTKFLTNRLKQLL