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MS002438 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002438
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily protein
Genome locationscaffold318:61897..62397
RNA-Seq ExpressionMS002438
SyntenyMS002438
Gene Ontology termsGO:0004857 - enzyme inhibitor activity (molecular function)
InterPro domainsIPR006501 - Pectinesterase inhibitor domain
IPR035513 - Invertase/pectin methylesterase inhibitor domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572152.1 Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2236.53Show/hide
Query:  AVSNDFVKDTCKK--HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEPVL
        + +N+F  DTC +   E+L K+CI  +DS+P +DLK +L G+L IF+NH+I+N  D+ ++L  + K   L+ +T+++   C++ + RG   L  S+  +L
Subjt:  AVSNDFVKDTCKK--HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEPVL

Query:  KKL--DIELSTAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP
         +   DI    A++ A    + C  ++E  P+PP W SRY +   LL L +GT NL++C R  AC+P
Subjt:  KKL--DIELSTAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP

KAG6585821.1 hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sororia]5.6e-2238.18Show/hide
Query:  QIAVSNDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLE-PV
        ++   +DF + TC +  EL  +CI+VI+S+P +DLK +L G LAIFIN ++    DD+ YL+ Q     LDNRT Q+   C   Y    D L   LE  +
Subjt:  QIAVSNDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLE-PV

Query:  LKKLDIELSTAMTEAFDLFSSCEFEYE-YTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAAC
        LK+ + +L+  + +  +  + CE E+E +  EP  W +RY  +  LL+LS+ T NLI+C R+  C
Subjt:  LKKLDIELSTAMTEAFDLFSSCEFEYE-YTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAAC

KAG6599036.1 hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2340.62Show/hide
Query:  NDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSL-EPVLKKLD
        NDF++DTC + E+   +CI+VIDSDP +DLKL+    L IFIN ++    DD+ YL+ Q     LDNRT+ I   C+ LY    D L   L E +LK+ +
Subjt:  NDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSL-EPVLKKLD

Query:  IELSTAMTEAFDLFSSCEFEYE-YTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAAC
         +L+  + +       C+ ++E +TP P TW SRY  +  LL+LS    NLI+C  + AC
Subjt:  IELSTAMTEAFDLFSSCEFEYE-YTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAAC

KAG6599042.1 hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sororia]9.2e-2540.61Show/hide
Query:  QIAVSNDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLE-PV
        ++ V+NDFV DTC K EEL  +C +VI SDP  DLK +L  LL IFIN ++    DD+ YL  Q     LDNRT ++   C++LY    D L + L+  +
Subjt:  QIAVSNDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLE-PV

Query:  LKKLDIELSTAMTEAFDLFSSCEFEYE-YTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAAC
        LK  + +L+  + +  +    CE ++E +TPE  TW SRY  +  LL+LS+   NLI+C  +  C
Subjt:  LKKLDIELSTAMTEAFDLFSSCEFEYE-YTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAAC

XP_022137307.1 uncharacterized protein LOC111008804 [Momordica charantia]1.7e-4758.08Show/hide
Query:  DQIAVSNDFVKDTCKK-HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEP
        ++++V+N FV +TC K  EE  K+CI VIDSDPHQDLKL+L GLLAIFINHSI NATD++LYL+EQ KR  LD   +     C++ Y RG+D+L SSLE 
Subjt:  DQIAVSNDFVKDTCKK-HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEP

Query:  VLKKLDIELSTAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP
        +LK    +L   +++AFD   +CE ++E TPEPP+WL+ YL LR LL LSMGTANLI+CK+VAAC+P
Subjt:  VLKKLDIELSTAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP

TrEMBL top hitse value%identityAlignment
A0A1U7YVD9 cell wall / vacuolar inhibitor of fructosidase 2-like4.3e-0431.86Show/hide
Query:  CIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEPV--LKKLDIELSTAMTEAFDLFSS
        CI++++SDPH +LK DL G   I +   ++NAT+D  Y+ E  K    DN T   L  C  LY + I    SS   +  +K   ++L   +  +      
Subjt:  CIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEPV--LKKLDIELSTAMTEAFDLFSS

Query:  CEFEYEYTPEPPT
        C  E  + P+P T
Subjt:  CEFEYEYTPEPPT

A0A5D3BJB5 Putative invertase inhibitor4.8e-1935.93Show/hide
Query:  DQIAVSNDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEPV
        DQ    NDFV+ TC +  EL  +C++ I S+P  DLK +L GLL IF+N SI+N  +D  +L ++     +   T+ +L  C+  +  G   L  ++E +
Subjt:  DQIAVSNDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEPV

Query:  LKKLDIEL-STAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP
          K   +     +    +L   C  ++E TP PP W SRY +   LL LSM   NLI C R  AC+P
Subjt:  LKKLDIEL-STAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP

A0A6J1C7W5 uncharacterized protein LOC1110088048.4e-4858.08Show/hide
Query:  DQIAVSNDFVKDTCKK-HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEP
        ++++V+N FV +TC K  EE  K+CI VIDSDPHQDLKL+L GLLAIFINHSI NATD++LYL+EQ KR  LD   +     C++ Y RG+D+L SSLE 
Subjt:  DQIAVSNDFVKDTCKK-HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEP

Query:  VLKKLDIELSTAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP
        +LK    +L   +++AFD   +CE ++E TPEPP+WL+ YL LR LL LSMGTANLI+CK+VAAC+P
Subjt:  VLKKLDIELSTAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54620.1 Plant invertase/pectin methylesterase inhibitor superfamily protein2.5e-0422.66Show/hide
Query:  VSNDFVKDTCKKHEELC-----KICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNR-TQQILTRCIDLYGRGIDVLTSSLE
        V N  V+  C +  +       K CIA ++ +       +   L  +  N++++N T+    + + F       R ++++L +C+ LY  G D LTS+L+
Subjt:  VSNDFVKDTCKKHEELC-----KICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNR-TQQILTRCIDLYGRGIDVLTSSLE

Query:  PVLKKLDIELSTAMTEAFDLFSSCEFEY
         +  +   ++S  + +A +  S CE  +
Subjt:  PVLKKLDIELSTAMTEAFDLFSSCEFEY

AT5G46930.1 Plant invertase/pectin methylesterase inhibitor superfamily protein9.6e-0425Show/hide
Query:  AVSNDFVKDTCKK-----HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATD-----DNLYLVEQF--KRPGLDNRTQQILTRCIDLYGRGID
        A +   ++D+CKK      +     C+  ++ +P       L GL+ +   ++++  T      D +   +++  +RP LD         C++LY   ID
Subjt:  AVSNDFVKDTCKK-----HEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATD-----DNLYLVEQF--KRPGLDNRTQQILTRCIDLYGRGID

Query:  VLTSSLEPVLKKLDIELST-AMTEAFDLFSSCEFEY
         L  SL+ V K  D + +T  M+ A D   SCE ++
Subjt:  VLTSSLEPVLKKLDIELST-AMTEAFDLFSSCEFEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGGATCAAATTGCAGTCTCAAATGATTTTGTTAAAGACACTTGTAAGAAACATGAAGAATTGTGCAAAATATGCATTGCTGTGATAGATTCAGATCCTCACCAAGACTT
GAAATTAGACCTATTCGGGCTCTTAGCCATCTTTATAAACCATTCTATTGCCAACGCCACCGACGATAATTTGTATCTTGTGGAGCAGTTCAAGAGACCAGGATTAGACA
ATAGAACACAACAAATCTTGACCAGATGCATAGATCTGTACGGGAGGGGCATAGATGTTCTGACATCATCCTTAGAACCAGTGTTAAAGAAACTTGATATAGAGTTGAGT
ACGGCAATGACTGAAGCGTTCGACTTGTTTTCGAGTTGTGAATTTGAGTATGAGTATACACCGGAACCTCCGACTTGGTTGTCTCGTTATCTTAGCTTACGTCCACTTCT
GGTGCTCTCAATGGGGACTGCAAATCTCATAGAGTGTAAAAGGGTCGCCGCTTGTGTTCCA
mRNA sequenceShow/hide mRNA sequence
ACGGATCAAATTGCAGTCTCAAATGATTTTGTTAAAGACACTTGTAAGAAACATGAAGAATTGTGCAAAATATGCATTGCTGTGATAGATTCAGATCCTCACCAAGACTT
GAAATTAGACCTATTCGGGCTCTTAGCCATCTTTATAAACCATTCTATTGCCAACGCCACCGACGATAATTTGTATCTTGTGGAGCAGTTCAAGAGACCAGGATTAGACA
ATAGAACACAACAAATCTTGACCAGATGCATAGATCTGTACGGGAGGGGCATAGATGTTCTGACATCATCCTTAGAACCAGTGTTAAAGAAACTTGATATAGAGTTGAGT
ACGGCAATGACTGAAGCGTTCGACTTGTTTTCGAGTTGTGAATTTGAGTATGAGTATACACCGGAACCTCCGACTTGGTTGTCTCGTTATCTTAGCTTACGTCCACTTCT
GGTGCTCTCAATGGGGACTGCAAATCTCATAGAGTGTAAAAGGGTCGCCGCTTGTGTTCCA
Protein sequenceShow/hide protein sequence
TDQIAVSNDFVKDTCKKHEELCKICIAVIDSDPHQDLKLDLFGLLAIFINHSIANATDDNLYLVEQFKRPGLDNRTQQILTRCIDLYGRGIDVLTSSLEPVLKKLDIELS
TAMTEAFDLFSSCEFEYEYTPEPPTWLSRYLSLRPLLVLSMGTANLIECKRVAACVP