; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002442 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002442
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold318:84979..86061
RNA-Seq ExpressionMS002442
SyntenyMS002442
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026218.1 nucleolin-like [Cucumis melo var. makuwa]1.4e-11870.62Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----
        MLAV DGR+ A G TLNDVLTI KR SPSPSPAVRL+GRTLLDIIRDDVGK    ++E+KSWKFLRDRLRL         N RSQIPPPNSLRF G    
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----

Query:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR
          M  DE+SPE T    AA SA P  R QISRRN TR + + PP S ATNSD +P N + AAA        LRPQ+SR NSTR +VERSESFTDLTEPAR
Subjt:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR

Query:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE
        EGTRRLSAALAEERS+SAREAVAAQEAADAEAIA   EQE E+E E               T AP+RMSLMDLLEETDRQMGFEGS Y IE+EEEEEEEE
Subjt:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE

Query:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EE E E+  V     GGG ERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Subjt:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

XP_008458019.1 PREDICTED: nucleolin-like [Cucumis melo]1.1e-11870.62Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----
        MLAV DGR+ A G TLNDVLTI KR SPSPSPAVRL+GRTLLDIIRDDVGK    ++E+KSWKFLRDRLRL         N RSQIPPPNSLRF G    
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----

Query:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR
          M  DE+SPE T    AA SA P  R QISRRN TR + + PP S ATNSD +P N + AAA        LRPQ+SR NSTR +VERSESFTDLTEPAR
Subjt:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR

Query:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE
        EGTRRLSAALAEERS+SAREAVAAQEAADAEAIA   EQE E+E E               T AP+RMSLMDLLEETDRQMGFEGS Y IE+EEEEEEEE
Subjt:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE

Query:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EE E E+  V     GGG ERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Subjt:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

XP_022960262.1 chromo domain-containing protein cec-1-like [Cucurbita moschata]1.7e-11668.53Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSA-GDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP
        MLAVGDGR+  GGLTLNDVLT+HKR SP+PSP VRLNGRTLLDI+RDDVGK  A G++E+KSWKFLRDRLRL         N RSQIPPPNSLRFA  S 
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSA-GDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP

Query:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL
              +EESPE+T P  AAA    P   QISRR+ TRLSQN P    ATNS ++P N  + + +     RS    LRPQ+SRRNSTR ++ERSESFTDL
Subjt:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL

Query:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE
        TEP  EGTR LSAALA ERS+SARE VA QEAADAE  A              D++D  A +TA ETAAPVRMSLMDLLEETDRQMGFEGSRY IE+E E
Subjt:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE

Query:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EEEEEEE+EEE EE   V GGG ER CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Subjt:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

XP_023004831.1 nucleolin-like [Cucurbita maxima]3.8e-11668.53Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKG-SAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP
        MLAVGDGR+  GGLTLNDVLT+HKR SP+PSP VRLNGRTLLDI+RDDVGK  +AG++E+KSWKFLRDRLRL         N RSQIPPPNSLRFA  S 
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKG-SAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP

Query:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL
              +E+SPE+T P  AAA    P   QISRRN TRLSQN P    ATNS ++P N  + + +     RS    LRPQ+SRRNSTR ++ERSESFTDL
Subjt:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL

Query:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE
        TEP  EGTRRLSAALA ERS+SARE VA QEAADAE  A+            EDDE+  A +TA ETAAPVRMSLMDLLEETDRQMGFEGSRY IE+E E
Subjt:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE

Query:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EEEEEEE++EE E+   V GGG E+ CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Subjt:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

XP_023522866.1 chromo domain-containing protein cec-1-like [Cucurbita pepo subsp. pepo]3.4e-11768.72Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSA-GDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP
        MLAVG+GR+  GGLTLNDVLT+HKR SP+PSP VRLNGRTLLDI+RDDVGK  A G++E+KSWKFLRDRLRL         N RSQIPPPNSLRFA  S 
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSA-GDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP

Query:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL
              +EESPE+T P  AAA    P   QISRR+ TRLSQN P    ATNS ++P N  +A+ +     RS    LRPQ+SRRNSTR ++ERSESFTDL
Subjt:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL

Query:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE
        TEP  EGTRRLSAALA ERS+SARE VA QEAADAE  A              D++D  A +TA ETAAPVRMSLMDLLEETDRQMGFEGSRY IE+E E
Subjt:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE

Query:  EEEEEEEDEEEIEEVD--GGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EEEEEEE+EE+ EEV   GGG ER CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Subjt:  EEEEEEEDEEEIEEVD--GGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

TrEMBL top hitse value%identityAlignment
A0A0A0K6R9 RING-type domain-containing protein2.0e-10766.3Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----
        MLAV DGRD AGG TLNDVL I KR  PS SPAVRL+GRTLLDIIRDDVGK    ++E+ SWKF RDRLRL         + RSQIPP NSLRF G    
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----

Query:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR
          MS DE SPE T    AA SA P  R QISRRN TRL+ +  P S ATNS+ +P N + AAA        LRPQ+SR NSTR +VERSESFTDLTEP R
Subjt:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR

Query:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE
        EGTRRLSAALAEERS+SAREAV AQEAADAEA   + EQ+ E+               A  T APVRMSLMDLLEETDRQMGFEGS Y IE+E+EEEE E
Subjt:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE

Query:  EEDEEEIEEVDG-GGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
         E    +    G GG E +CCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Subjt:  EEDEEEIEEVDG-GGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

A0A1S3C6E1 nucleolin-like5.1e-11970.62Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----
        MLAV DGR+ A G TLNDVLTI KR SPSPSPAVRL+GRTLLDIIRDDVGK    ++E+KSWKFLRDRLRL         N RSQIPPPNSLRF G    
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----

Query:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR
          M  DE+SPE T    AA SA P  R QISRRN TR + + PP S ATNSD +P N + AAA        LRPQ+SR NSTR +VERSESFTDLTEPAR
Subjt:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR

Query:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE
        EGTRRLSAALAEERS+SAREAVAAQEAADAEAIA   EQE E+E E               T AP+RMSLMDLLEETDRQMGFEGS Y IE+EEEEEEEE
Subjt:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE

Query:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EE E E+  V     GGG ERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Subjt:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

A0A5D3E4J3 Nucleolin-like6.7e-11970.62Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----
        MLAV DGR+ A G TLNDVLTI KR SPSPSPAVRL+GRTLLDIIRDDVGK    ++E+KSWKFLRDRLRL         N RSQIPPPNSLRF G    
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAG----

Query:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR
          M  DE+SPE T    AA SA P  R QISRRN TR + + PP S ATNSD +P N + AAA        LRPQ+SR NSTR +VERSESFTDLTEPAR
Subjt:  --MSPDEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAR

Query:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE
        EGTRRLSAALAEERS+SAREAVAAQEAADAEAIA   EQE E+E E               T AP+RMSLMDLLEETDRQMGFEGS Y IE+EEEEEEEE
Subjt:  EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEE

Query:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EE E E+  V     GGG ERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
Subjt:  EEDEEEIEEV----DGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

A0A6J1H6Y3 chromo domain-containing protein cec-1-like8.2e-11768.53Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSA-GDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP
        MLAVGDGR+  GGLTLNDVLT+HKR SP+PSP VRLNGRTLLDI+RDDVGK  A G++E+KSWKFLRDRLRL         N RSQIPPPNSLRFA  S 
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSA-GDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP

Query:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL
              +EESPE+T P  AAA    P   QISRR+ TRLSQN P    ATNS ++P N  + + +     RS    LRPQ+SRRNSTR ++ERSESFTDL
Subjt:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL

Query:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE
        TEP  EGTR LSAALA ERS+SARE VA QEAADAE  A              D++D  A +TA ETAAPVRMSLMDLLEETDRQMGFEGSRY IE+E E
Subjt:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE

Query:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EEEEEEE+EEE EE   V GGG ER CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Subjt:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

A0A6J1KT79 nucleolin-like1.8e-11668.53Show/hide
Query:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKG-SAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP
        MLAVGDGR+  GGLTLNDVLT+HKR SP+PSP VRLNGRTLLDI+RDDVGK  +AG++E+KSWKFLRDRLRL         N RSQIPPPNSLRFA  S 
Subjt:  MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKG-SAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSP

Query:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL
              +E+SPE+T P  AAA    P   QISRRN TRLSQN P    ATNS ++P N  + + +     RS    LRPQ+SRRNSTR ++ERSESFTDL
Subjt:  ------DEESPETTAPAAAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRS----LRPQISRRNSTRLAVERSESFTDL

Query:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE
        TEP  EGTRRLSAALA ERS+SARE VA QEAADAE  A+            EDDE+  A +TA ETAAPVRMSLMDLLEETDRQMGFEGSRY IE+E E
Subjt:  TEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEE

Query:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        EEEEEEE++EE E+   V GGG E+ CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Subjt:  EEEEEEEDEEEIEE---VDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07120.1 RING/U-box superfamily protein2.7e-4337.86Show/hide
Query:  MLAVGDGRDFAGGLTLNDVL----TIHKRGSPSPSPAV-------RLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRR-----GLEISLRNSRS
        M A+    +   GL+L+ VL     I     PSP P         R   +TL DIIR++  K   G K++ +W+  R++LRL+R        + +  S  
Subjt:  MLAVGDGRDFAGGLTLNDVL----TIHKRGSPSPSPAV-------RLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRR-----GLEISLRNSRS

Query:  QIPPPNSLRFAGMSPDEESPETTAPAAAAASAPP--PFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPN--PGRSLRPQISRRNSTRLAV
         IP P  +  A  S            A   S PP    R   +R +  R+         + N DD+P       +VL +  P RS +PQ+SR +S R   
Subjt:  QIPPPNSLRFAGMSPDEESPETTAPAAAAASAPP--PFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPN--PGRSLRPQISRRNSTRLAV

Query:  ERSESFTDLTEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGS
        E  E+            R       EER +SAREAVAAQEAA+AEA A    ++ ++++EE+D  ++    +++ +     MSLMDLLEETDRQMG  GS
Subjt:  ERSESFTDLTEPAREGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGS

Query:  RYIIEEEE--EEEEEEEEDEEEIEEVDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
        RY ++E+E  EE+EE+E +EEE +   GG  E +CCVCMV+ KGA+F PCGHTFC+LCS+EL   +G+CP+C+ F+LE L+IF
Subjt:  RYIIEEEE--EEEEEEEEDEEEIEEVDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

AT3G25030.1 RING/U-box superfamily protein2.5e-2547.73Show/hide
Query:  DLTEPAR--EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIE
        ++TE A   EG  RL A LAEER+LSARE                     EE   E + E             P RMSLM+LLEE + QM F        
Subjt:  DLTEPAR--EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIE

Query:  EEEEEEEEEEEDEEEIEEVDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
                + E EEE+  V     E +CCVCMVR KGAAFIPCGHTFCRLCSRELWV RGNCPLCN  ILE+LD+F
Subjt:  EEEEEEEEEEEDEEEIEEVDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

AT3G25030.2 RING/U-box superfamily protein2.5e-2547.73Show/hide
Query:  DLTEPAR--EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIE
        ++TE A   EG  RL A LAEER+LSARE                     EE   E + E             P RMSLM+LLEE + QM F        
Subjt:  DLTEPAR--EGTRRLSAALAEERSLSAREAVAAQEAADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIE

Query:  EEEEEEEEEEEDEEEIEEVDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF
                + E EEE+  V     E +CCVCMVR KGAAFIPCGHTFCRLCSRELWV RGNCPLCN  ILE+LD+F
Subjt:  EEEEEEEEEEEDEEEIEEVDGGGPERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

AT4G13100.1 RING/U-box superfamily protein2.1e-2454.62Show/hide
Query:  ATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEEEEDEEEIEEVDGGG--------PERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV
        A   E   P RMSLM+LLE+ D      G  Y +   +E E E  +        DGGG         E  CCVCMVR KGAAFIPCGHTFCRLCSRELWV
Subjt:  ATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEEEEDEEEIEEVDGGG--------PERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV

Query:  SRGNCPLCNGFILEILDIF
         RGNCPLCN  IL++LDIF
Subjt:  SRGNCPLCNGFILEILDIF

AT4G13100.4 RING/U-box superfamily protein2.1e-2454.62Show/hide
Query:  ATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEEEEDEEEIEEVDGGG--------PERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV
        A   E   P RMSLM+LLE+ D      G  Y +   +E E E  +        DGGG         E  CCVCMVR KGAAFIPCGHTFCRLCSRELWV
Subjt:  ATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEEEEDEEEIEEVDGGG--------PERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV

Query:  SRGNCPLCNGFILEILDIF
         RGNCPLCN  IL++LDIF
Subjt:  SRGNCPLCNGFILEILDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCGGTCGGCGACGGCCGAGATTTCGCCGGCGGTTTGACACTCAACGACGTTTTGACCATTCATAAGAGAGGTTCGCCGAGCCCGTCGCCGGCGGTGAGACTGAA
CGGCCGGACTCTGCTTGATATTATACGAGACGACGTCGGAAAAGGCTCCGCCGGCGACAAAGAGAAGAAGTCTTGGAAATTTCTAAGGGATCGCCTCCGGCTGAGGCGCG
GCCTCGAGATTTCCCTCCGCAACTCCAGATCTCAAATTCCGCCGCCGAATTCGCTTCGCTTCGCCGGTATGTCGCCGGACGAAGAATCACCGGAGACCACCGCCCCAGCC
GCCGCCGCCGCCTCCGCCCCTCCGCCATTCCGGCCTCAGATATCGCGGCGGAATATCACGCGGCTCAGCCAGAACGCGCCTCCGCCGTCCCACGCCACAAATTCCGACGA
CGCGCCGGTGAACACCGCAACAGCCGCCGCCGTCCTCCCCAACCCCGGACGGAGCCTGAGGCCGCAAATCTCCCGGCGCAACTCGACGAGACTCGCCGTGGAGCGCAGCG
AAAGCTTCACGGACCTGACGGAGCCGGCGCGTGAGGGCACGCGCCGCCTCTCAGCGGCGTTGGCGGAGGAGAGATCGCTGTCGGCAAGAGAAGCGGTGGCGGCCCAAGAA
GCAGCAGACGCAGAAGCCATAGCCCACCAACACGAACAAGAACACGAAGAAGAAGAAGAAGAAGAAGACGACGAAGATTCCGCGGCGGGGGCCACGGCGGCGGAGACGGC
GGCGCCGGTGAGAATGTCGCTGATGGATCTCTTAGAGGAAACGGACAGGCAAATGGGATTCGAGGGATCAAGATACATAATAGAAGAAGAAGAAGAAGAGGAGGAGGAGG
AGGAAGAGGATGAGGAGGAGATAGAAGAAGTCGACGGCGGCGGGCCGGAGCGGAACTGCTGCGTGTGCATGGTAAGGCATAAAGGCGCGGCATTTATCCCCTGCGGTCAC
ACTTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTGAGCAGAGGGAACTGTCCGCTTTGCAATGGCTTCATCTTGGAGATTCTTGACATCTTC
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCGGTCGGCGACGGCCGAGATTTCGCCGGCGGTTTGACACTCAACGACGTTTTGACCATTCATAAGAGAGGTTCGCCGAGCCCGTCGCCGGCGGTGAGACTGAA
CGGCCGGACTCTGCTTGATATTATACGAGACGACGTCGGAAAAGGCTCCGCCGGCGACAAAGAGAAGAAGTCTTGGAAATTTCTAAGGGATCGCCTCCGGCTGAGGCGCG
GCCTCGAGATTTCCCTCCGCAACTCCAGATCTCAAATTCCGCCGCCGAATTCGCTTCGCTTCGCCGGTATGTCGCCGGACGAAGAATCACCGGAGACCACCGCCCCAGCC
GCCGCCGCCGCCTCCGCCCCTCCGCCATTCCGGCCTCAGATATCGCGGCGGAATATCACGCGGCTCAGCCAGAACGCGCCTCCGCCGTCCCACGCCACAAATTCCGACGA
CGCGCCGGTGAACACCGCAACAGCCGCCGCCGTCCTCCCCAACCCCGGACGGAGCCTGAGGCCGCAAATCTCCCGGCGCAACTCGACGAGACTCGCCGTGGAGCGCAGCG
AAAGCTTCACGGACCTGACGGAGCCGGCGCGTGAGGGCACGCGCCGCCTCTCAGCGGCGTTGGCGGAGGAGAGATCGCTGTCGGCAAGAGAAGCGGTGGCGGCCCAAGAA
GCAGCAGACGCAGAAGCCATAGCCCACCAACACGAACAAGAACACGAAGAAGAAGAAGAAGAAGAAGACGACGAAGATTCCGCGGCGGGGGCCACGGCGGCGGAGACGGC
GGCGCCGGTGAGAATGTCGCTGATGGATCTCTTAGAGGAAACGGACAGGCAAATGGGATTCGAGGGATCAAGATACATAATAGAAGAAGAAGAAGAAGAGGAGGAGGAGG
AGGAAGAGGATGAGGAGGAGATAGAAGAAGTCGACGGCGGCGGGCCGGAGCGGAACTGCTGCGTGTGCATGGTAAGGCATAAAGGCGCGGCATTTATCCCCTGCGGTCAC
ACTTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTGAGCAGAGGGAACTGTCCGCTTTGCAATGGCTTCATCTTGGAGATTCTTGACATCTTC
Protein sequenceShow/hide protein sequence
MLAVGDGRDFAGGLTLNDVLTIHKRGSPSPSPAVRLNGRTLLDIIRDDVGKGSAGDKEKKSWKFLRDRLRLRRGLEISLRNSRSQIPPPNSLRFAGMSPDEESPETTAPA
AAAASAPPPFRPQISRRNITRLSQNAPPPSHATNSDDAPVNTATAAAVLPNPGRSLRPQISRRNSTRLAVERSESFTDLTEPAREGTRRLSAALAEERSLSAREAVAAQE
AADAEAIAHQHEQEHEEEEEEEDDEDSAAGATAAETAAPVRMSLMDLLEETDRQMGFEGSRYIIEEEEEEEEEEEEDEEEIEEVDGGGPERNCCVCMVRHKGAAFIPCGH
TFCRLCSRELWVSRGNCPLCNGFILEILDIF